Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g1193 ATGGGATTATTTTTTTGGAGGGGTTTAGTTTTGGCGGTGGTTGTAGTGGCGGCGACGGTGGAGAGAAGGGAGGCGCAATTAGTAGAAAATTTTTATGCCTCAAGTTGCCCAAACCTAGAGGAAATAGTTACACAATCTGTTCAATCCAAGTTTGCTCAAACCTTCGTTACCATTCCTGCAACTTTGCGACTCTTCTTCCATGACTGCTTTGTTGAGGGATGTGATGGTTCAGTGATGATAGCATCTCCGAATGGGGATGCAGAGAAAGACGCTAAAGACAATGTTTCATTAGCAGGAGATGGATTTGACACGGTTGTTAAAGCAAAACAAGCAGTTGAAAATGTTTGTCCCGGTGTTGTCTCATGTGCTGACATCTTGGCTCTTGCAACTAGAGACGTGGTTAACTTGGCTGGAGGTCCACAATACAGCGTAGAACTTGGACGTCGAGATGGGCTAATTTCCCAAGCATCTCGAGTGGCTGGAAACCTACCAGAACCATTCTTCAATCTGGACCAACTCACCACCATGTTCGCCGCCCACAACCTTACCCTCATCGACATCATCGCCCTCTCCGGAGCTCACACCCTCGGCTTCTCCCATTGTGACCGTTTTGCCAACCGCCTTTACTCGTTTTCCCCTTCGTCTCCAGTGGACCCATCGTTAGACCCCGGCTACGCTCGACAGCTAATGGATGCTTGTCCGCAAAACGTGGATCCTAGTGTGGCCATCAACATGGACCCTATAACCCCTCAGACCTTTGACAACCTTTACTACCAGAATCTTGTTGCCGGCAAGGGGCTCTTCACTGCGGACCAGATTCTGTTTACTGAGTCAGAATCGCAGCCGACGGTTCTTAGCTTTTCCACCAATGGGGCGGAGTTTAATGCAGCATTTATTAGGGCCATGACTAAGTTGGGTCGGGTCGGGGTTAAGACGGGTAATAATGGTGAAATTCGAAGGGATTGCACTGCCTTTAATTCCTAA 984 48.48 MGLFFWRGLVLAVVVVAATVERREAQLVENFYASSCPNLEEIVTQSVQSKFAQTFVTIPATLRLFFHDCFVEGCDGSVMIASPNGDAEKDAKDNVSLAGDGFDTVVKAKQAVENVCPGVVSCADILALATRDVVNLAGGPQYSVELGRRDGLISQASRVAGNLPEPFFNLDQLTTMFAAHNLTLIDIIALSGAHTLGFSHCDRFANRLYSFSPSSPVDPSLDPGYARQLMDACPQNVDPSVAINMDPITPQTFDNLYYQNLVAGKGLFTADQILFTESESQPTVLSFSTNGAEFNAAFIRAMTKLGRVGVKTGNNGEIRRDCTAFNS 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9770968 9772844 + CrPI670011_11g011930.1 Cre11g1193 512938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g1193 327 FunFam Peroxidase 30 171 - -
Cre11g1193 327 ProSiteProfiles Plant heme peroxidase family profile. 26 326 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g1193 327 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g1193 327 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g1193 327 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g1193 327 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g1193 327 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g1193 327 SUPERFAMILY Heme-dependent peroxidases 26 326 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g1193 327 Gene3D Peroxidase, domain 2 164 305 - -
Cre11g1193 327 Gene3D - 30 326 - -
Cre11g1193 327 PANTHER - 12 326 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g1193 327 FunFam Peroxidase 164 305 - -
Cre11g1193 327 Pfam Peroxidase 43 289 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g1193 327 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g1193 327 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g1193 327 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g1193 327 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g1193 327 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g1193 327 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g1193 327 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g1193 327 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g1193 327 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre11g1193 327 CDD secretory_peroxidase 26 325 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cre11g1193 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0930 Cre-Chr3:8082102 Cre11g1193 Cre-Chr11:9770968 4.50E-74 dispersed
Cre04g1364 Cre-Chr4:32468319 Cre11g1193 Cre-Chr11:9770968 1.90E-114 dispersed
Cre06g1308 Cre-Chr6:7030558 Cre11g1193 Cre-Chr11:9770968 9.50E-66 dispersed
Cre06g2540 Cre-Chr6:33040600 Cre11g1193 Cre-Chr11:9770968 1.20E-71 dispersed
Cre10g1596 Cre-Chr10:30072817 Cre11g1193 Cre-Chr11:9770968 1.20E-71 dispersed
Cre11g1063 Cre-Chr11:8063455 Cre11g1193 Cre-Chr11:9770968 3.60E-57 dispersed
Cre11g1191 Cre-Chr11:9722489 Cre11g1193 Cre-Chr11:9770968 2.40E-118 dispersed
Cre11g1193 Cre-Chr11:9770968 Cre07g1238 Cre-Chr7:25883449 1.70E-59 dispersed
Cre11g1192 Cre-Chr11:9735754 Cre11g1193 Cre-Chr11:9770968 1.30E-106 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g1193 K00430 - csv:101213580 572.392