Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g1194 ATGGGTCGGTGGAATGAGAAACTTGTAGCCTTTATTAACAATAGATGGTTAGTTTTTGTGGCTGCAATATGGCTTCAATCATGCGCTGGAATTGGGTATCTTTTTGGAAGCATATCGCCGGTGATCAAAACCAATTTGAGTTACAATCAGAGGCAAATTGCACGTCTCGGTGTCGCGAAAGACCTTGGCGACAGCGTCGGCATTTTGGCCGCAACCTTGTCGGAGATACTGCCCTTCTGGGGAGCTCTCTTGGTCGGTGCTATCCATAACTTTGTTGGGTATGGTTGGATTTGGCTCATCGTCTCTGGTCGAGCTCCCGTTTTGCCTCTCTGGGCTATGTGCGTTCTTGTATTTATGGGAACGAATGGGGAGACGTACTTCAATACAGTTTCACTGGTCTCTTGCGTACAAAACTTTCCGAAAAGTAGGGGCCCTGTGGTTGGGATTCTGAAAGGCTTTGCTGGTTTAAGTGGTGCAATTTTGACTCAGATATATGCAATCATGCATTCTCCTGATTCAGCCAATCTTATATTCATGATTGCAGTAGGTCCTGCACTGGTGGCTATTGGTGTGATGTTTTTAATCAGACCTGTCGCCGGTCATAGACAAGTAAGGCCGTCCGATGGCATGAGCTTTACTAGTGTTTATGGTGTCTGCCTCCTTTTGGCTGCTTATTTGATGGGAGTCATGCTTGTTGAGGATCTTGTTACCTTGAGCCCCACTGTGATAGGCATTTTTACTGCAGTTATGTTTGTCATCCTTCTTACGCCCTTTTTGATTCCGGTGACATTGACTTTTAGCTCGGAGACGACAACATATGCTGAGCAAGAGGCTCTCCTACCACCGTCAGAGAAACAAGAACCTGCTAGAACTGAACCAGATGGTAATGAAGTGATATTTAGTGAGGTGGAAGACGAAAAATCAGAGGGAGAGGACTTACTTCCTGCATCAGAGAGACAAAAACGCATTGCTCAATTGCAAGCGAAACTATTGCAAGCAGCTGCAGAAGGAGCAGTAAGAGTCAAGAGGAGGAAGGGTCCACGTAGAGGGGAAGACTTCACTTTGGGTCAAGCTTTAATCAAAGCGGACTTTTGGCTTATATTTTCCTCCCATCTCCTTGGTTCTGGAACTGGATTGACCGTGATCGATAACCTCGGACAGATGAGCCAGTCTTTAGGTTATGATAATACACATATTTTCGTATCCCTGATCAGCATATGGAACTTTCTCGGCCGTGTTGGTGGTGGATACCTCTCTGAGATTGTTGTGAGAGATTTTGCTTATCCAAGACCCATTGCAATGACGATTGCACAATTCCTTATGATATTTGGACATGTCTTCATCGGTATGGGATGGCCTGGGGCAATGTACATTGGTACTCTCATAACGGGGCTCGGGTACGGGGCTCACTGGGCAATTGTGCCTGCTACTGCCTCTGAATTGTTTGGCTTGAAAAAGTTTGGGGCTTTATACAACTTCATCACTCTCTCAACTCCTGTAGGATCGCTGATATTTTCTGGCTTAATCGCGAGCAGTATATATGATAGTGAAGCAGAGAAGCAAGCTCATAATCACATCTCACAGCTGCAGAGCTCCTCGTCATTTTGGTTCACTAGACTCTACACCGATGGACCGCACAAGTGCGAGGGTGCTATATGTTTCTTTCTAACTTGTATGATAATGGCTGGATTCTGTGCGATTGCAGGCATGTTAAGTTTAATCTTGGTGTATCGGACGAGGGGGGTTTACTACAACCTCTATGGAAAATCTCATAGCTTTGCAAGAACTCACAAGAACCATTTCCCAAGGGCCGAGAACTCGAAATCGACTCGCTTCGCTCTTACAGTTACAATTCAGCCTTTTGAGAAACTTGAATCTGGAGTCGTCCGGTTGAGTGTGAATGTAGATTTGAAGATTAGTGGGTGTATTCAGCACCAGAAGTACTCTTTGGTTCAGAGGTGTATTTCGGCGTGGGTGTGGTCTCGGCTTGGAGGGGGTTCACTCACGTGGTTCTCCGGTTTTCGGGAGTTTGTTTCTAGCGTCGTGGTCTCCTTCTTCATTGCGGAGGAGACTTCAGAGGATGATGCTCTTGTTGATTTCTCTGAAATCTCCTTCTTCATTGCAGAGGCAAAGGATCTAGCCAATGAGTCAGACTGTTAG 2160 45.83 MGRWNEKLVAFINNRWLVFVAAIWLQSCAGIGYLFGSISPVIKTNLSYNQRQIARLGVAKDLGDSVGILAATLSEILPFWGALLVGAIHNFVGYGWIWLIVSGRAPVLPLWAMCVLVFMGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYAIMHSPDSANLIFMIAVGPALVAIGVMFLIRPVAGHRQVRPSDGMSFTSVYGVCLLLAAYLMGVMLVEDLVTLSPTVIGIFTAVMFVILLTPFLIPVTLTFSSETTTYAEQEALLPPSEKQEPARTEPDGNEVIFSEVEDEKSEGEDLLPASERQKRIAQLQAKLLQAAAEGAVRVKRRKGPRRGEDFTLGQALIKADFWLIFSSHLLGSGTGLTVIDNLGQMSQSLGYDNTHIFVSLISIWNFLGRVGGGYLSEIVVRDFAYPRPIAMTIAQFLMIFGHVFIGMGWPGAMYIGTLITGLGYGAHWAIVPATASELFGLKKFGALYNFITLSTPVGSLIFSGLIASSIYDSEAEKQAHNHISQLQSSSSFWFTRLYTDGPHKCEGAICFFLTCMIMAGFCAIAGMLSLILVYRTRGVYYNLYGKSHSFARTHKNHFPRAENSKSTRFALTVTIQPFEKLESGVVRLSVNVDLKISGCIQHQKYSLVQRCISAWVWSRLGGGSLTWFSGFREFVSSVVVSFFIAEETSEDDALVDFSEISFFIAEAKDLANESDC 719
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9775162 9783921 - CrPI670011_11g011940.1 Cre11g1194 512939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g1194 719 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 586 - GO:0016020(PANTHER)
Cre11g1194 719 CDD MFS_Mch1p_like 15 568 - -
Cre11g1194 719 Coils Coil 316 336 - -
Cre11g1194 719 Gene3D MFS general substrate transporter like domains 364 582 IPR036259 -
Cre11g1194 719 Pfam Nodulin-like 15 262 IPR010658 -
Cre11g1194 719 MobiDBLite consensus disorder prediction 278 297 - -
Cre11g1194 719 SUPERFAMILY MFS general substrate transporter 212 581 IPR036259 -
Cre11g1194 719 SUPERFAMILY MFS general substrate transporter 10 202 IPR036259 -
Cre11g1194 719 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1592 Cre-Chr7:31415845 Cre11g1194 Cre-Chr11:9775162 2.70E-92 dispersed
Cre10g2113 Cre-Chr10:35730619 Cre11g1194 Cre-Chr11:9775162 2.20E-81 dispersed
Cre10g2117 Cre-Chr10:35756615 Cre11g1194 Cre-Chr11:9775162 6.20E-33 dispersed
Cre11g1194 Cre-Chr11:9775162 Cre02g1490 Cre-Chr2:27012904 8.10E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g1194 - - - 0.0