Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre11g1350 | ATGGGAATTATTAGTTTGGGAGAAGAATATTACATGATGAGTTTAAGAAGTGGAGTAGTGTTGGGAATGATAACGTGGTTGGTTTGGACATGGATCATTGTGCATAGATGGAACCAAAGGAAGAAGACGACAGGTCCTAAAACATGGCCACTCGTAGGAGCAGCAATCGAACAGTTTTTAAATTACCACAGAATGCATGATTGGCTTCTTGGTTACCTTAATCTCTCCAAAACTGTTGTGGTTCCTATGCCTTTCACTACTTATACTTACATTGCTGACCCTGCCAATGTTCAGCATATTCTCAAGACCAACTTTGCTAATTATCCTAAGGGTGATGTGTATCATTCATACATGGAAGTGCTTCTTGGAGATGGGATATTCAACGTAGATGGAGAGCTGTGGAGAAAACAAAGGAAAACTGCGAGCTTCGAATTTGCATCTAAGAATTTGAGGGATTTCAGTACCTTAGTTTTCAGAGAGTACACTCTGAAGCTATCAAATATTTTAACAAGGGCCTCTCTAGACAACCAACAAATTGACATGCAGGAATTGTTGATGAGAATGACCTTAGACTCGATATGCAAGGTGGGATTTGGTGTTGAAATTGGATCATTGGCTCCAAATTTGCCAGAAAATGGGTTTGCTAAGGCGTTTGACACAGCCAACATGATCGTCACCCTTCGTTTCATCGATCCTTTATGGAAAATTAAAAGATTTCTGAATTTGGGATCTGAAGCTCTTCTTGATAGGTCCATCAAAATCATCGATGATTTCACCTACTCTGTCATTGCCACTAGGAAAAAAGAGATGCAACAACAACCTCAAACCACATCCAAAGATGCCAATAAGGAGAAAAAACATGACATATTGTCAAGGTTTATTGAGTTAGGCGAAGACCCAAACAACAATTTCACAAATAAAAGCTTAAGAGATGTTGTTCTAAACTTCGTGATTGCTGGACGTGACACAACAGCTGCAACTCTTTCATGGGCTATTTATATGGTAATGACTCATTCTCATGTAGCTCACAAACTTTACTCAGAGCTCAAGAATTTCGAAGAAGAAAGAGCCAAAGAAGAAAACATTTCATTGCTTCAATATCAACCAACTGATCTTCAATCCTTTGAGAGAAGAGTAATGCAATTTTCACAAATCCTCAATTATGATTCCCTTGGTCGATTACACTATTTGCATGCTACCATCACTGAGACACTTCGTCTTTACCCTGCAGTCCCTCAGGACCCAAAGGGAATTTTGGAGGATGATGTATTGCCAGATGGTACAAAGGTAAGAGCAGGAGGAATGGTGACATATGTTCCTTACTCAATGGGAAGAATGGAATACAATTGGGGTTGTGATGCAACTTCATTTAACCCTGAAAGATGGCTCAAACAAGGCATTTTCCACAATGAATCTCCATTCAAGTTCACAGCTTTTCAGGCTGGACCAAGGATTTGCATGGGAAAGGACTCAGCATATCTACAGATGAAAATGGCTCTTGCCATTTTGTGCAGATTCTACAAATTTAGTTTGGTGAGTGGGCATCGAGTCAACTACAGAATGATGACTATTCTCTCCATGGCTAATGGCTTGAAAAGGAGAGAGAGCTGCATTCCAGACGGCATCGGAGAAGCCAAGGACATGGGAAACTACAGGCGACCAGCGAAGGCTTGTTGTGCTTGGGACAAAACCTTGACACTCTTAATCCTTTCCGCAGTTCTGCATGCGCTTGGGCTTTCCATAGTGTCGCAAACTTAA | 1758 | 40.78 | MGIISLGEEYYMMSLRSGVVLGMITWLVWTWIIVHRWNQRKKTTGPKTWPLVGAAIEQFLNYHRMHDWLLGYLNLSKTVVVPMPFTTYTYIADPANVQHILKTNFANYPKGDVYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTLVFREYTLKLSNILTRASLDNQQIDMQELLMRMTLDSICKVGFGVEIGSLAPNLPENGFAKAFDTANMIVTLRFIDPLWKIKRFLNLGSEALLDRSIKIIDDFTYSVIATRKKEMQQQPQTTSKDANKEKKHDILSRFIELGEDPNNNFTNKSLRDVVLNFVIAGRDTTAATLSWAIYMVMTHSHVAHKLYSELKNFEEERAKEENISLLQYQPTDLQSFERRVMQFSQILNYDSLGRLHYLHATITETLRLYPAVPQDPKGILEDDVLPDGTKVRAGGMVTYVPYSMGRMEYNWGCDATSFNPERWLKQGIFHNESPFKFTAFQAGPRICMGKDSAYLQMKMALAILCRFYKFSLVSGHRVNYRMMTILSMANGLKRRESCIPDGIGEAKDMGNYRRPAKACCAWDKTLTLLILSAVLHALGLSIVSQT | 585 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 14678281 | 14692004 | - | CrPI670011_11g013500.1 | Cre11g1350 | 513095 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre11g1350 | 585 | CDD | CYP86A | 77 | 531 | - | - | |
| Cre11g1350 | 585 | PRINTS | P450 superfamily signature | 319 | 336 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g1350 | 585 | PRINTS | P450 superfamily signature | 399 | 410 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g1350 | 585 | PRINTS | P450 superfamily signature | 477 | 486 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g1350 | 585 | PRINTS | P450 superfamily signature | 486 | 497 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g1350 | 585 | PRINTS | E-class P450 group I signature | 476 | 486 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g1350 | 585 | PRINTS | E-class P450 group I signature | 328 | 354 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g1350 | 585 | PRINTS | E-class P450 group I signature | 308 | 325 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g1350 | 585 | PRINTS | E-class P450 group I signature | 398 | 416 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g1350 | 585 | PRINTS | E-class P450 group I signature | 486 | 509 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g1350 | 585 | Pfam | Cytochrome P450 | 378 | 523 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g1350 | 585 | Pfam | Cytochrome P450 | 45 | 359 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g1350 | 585 | Coils | Coil | 342 | 362 | - | - | |
| Cre11g1350 | 585 | FunFam | Alkane hydroxylase MAH1 | 38 | 536 | - | - | |
| Cre11g1350 | 585 | SUPERFAMILY | Cytochrome P450 | 35 | 531 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g1350 | 585 | Gene3D | Cytochrome P450 | 42 | 536 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g1350 | 585 | PANTHER | CYTOCHROME P450 | 30 | 531 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre05g0291 | Cre-Chr5:2695439 | Cre11g1350 | Cre-Chr11:14678281 | 1.00E-106 | dispersed | |
| Cre10g2027 | Cre-Chr10:34913861 | Cre11g1350 | Cre-Chr11:14678281 | 6.40E-74 | dispersed | |
| Cre11g1350 | Cre-Chr11:14678281 | Cre04g1338 | Cre-Chr4:32214180 | 2.00E-13 | dispersed | |
| Cre11g1350 | Cre-Chr11:14678281 | Cre05g0288 | Cre-Chr5:2635501 | 1.70E-105 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre11g1350 | K20495 | - | csv:101222076 | 920.228 |