Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre11g1358 | ATGGAATCGGAGGACGAGCTCGACATGCACGATGCCCATGACGACGACGGCTCTGTTGACAATGAGGAGGACTTCTACAGTGGCGGCGACGACGATGGTGCCGCCATCGACAGCGACGATGCTGATGTCGGTGATTACGAGTTTGTTGATAATGATTCCGACGATTCCGACGACATGGTCTCCTATCGCCACCAGCAAAACTATATAATCTTGGCCGAGGCAGATATACAGCAGCGGCAGGAGGAAGACATCATGAGAGTATCCACTGTTCTTTCGATTTCAAAAGTAGCCGCTAGCATCTTGCTTCGATATTACAACTGGAGTGTCAGTAAAGTGCATGATGAATGGTTTGCAGATGAAGAAAAGGTCCGTAGATCTGTTGGCTTACTAGAAAAACCAGTTTTGCGACATTCAAATGAACTAGAACTACCTTGTGGTATATGTTTTGAAATCTATTCACGTGATAAGATCCAGTCTGCTGCTTGTGGCCATCCATTTTGCAATGCGTGTTGGACAGGTGCTTTTGAACGGGAACAACAATGCCCAACAAATCATCCATGA | 561 | 46.52 | MESEDELDMHDAHDDDGSVDNEEDFYSGGDDDGAAIDSDDADVGDYEFVDNDSDDSDDMVSYRHQQNYIILAEADIQQRQEEDIMRVSTVLSISKVAASILLRYYNWSVSKVHDEWFADEEKVRRSVGLLEKPVLRHSNELELPCGICFEIYSRDKIQSAACGHPFCNACWTGAFEREQQCPTNHP | 186 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 16449563 | 16458435 | + | CrPI670011_11g013580.1 | Cre11g1358 | 513103 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre11g1358 | 186 | MobiDBLite | consensus disorder prediction | 1 | 58 | - | - | |
Cre11g1358 | 186 | ProSiteProfiles | Zinc finger RING-type profile. | 145 | 185 | IPR001841 | - | |
Cre11g1358 | 186 | MobiDBLite | consensus disorder prediction | 1 | 55 | - | - | |
Cre11g1358 | 186 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 109 | 185 | IPR013083 | - | |
Cre11g1358 | 186 | SUPERFAMILY | RING/U-box | 144 | 183 | - | - | |
Cre11g1358 | 186 | Pfam | Zinc finger, C3HC4 type (RING finger) | 145 | 183 | - | - | |
Cre11g1358 | 186 | PANTHER | RING FINGER DOMAIN-CONTAINING | 69 | 183 | IPR047134 | - | |
Cre11g1358 | 186 | Pfam | E3 ubiquitin-protein ligase ARIH1, UBA-like domain | 78 | 117 | IPR048962 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre11g1358 | K11968 | - | csv:101218052 | 293.123 |