Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g1419 ATGGAGCATGGAGATGTTGTGTCGAAGGGCATGGTGTCAGACCCTTCAAGTTCGTACAAAAAAATCATAATAGTTGCGGCTATTGCAGCCGGAGTCCAATTTGGTTGGGCTCTCCAGCTTTCGTTGCTGACACCTTACGTACAGCAACTTGGAGTTTCACATACATGGTCAGCTTTCATATGGCTTTGTGGGCCATTATCAGGGCTTATTGTCCAACCCACTGTTGGATATTACAGCGATCGTTGCACTTCTAGGTTTGGTCGTCGTCGACCATTCATTGCTGCTGGGGCTGGCTTTGTGGCGGCTGCAGTTTTCCTCATTGGCTTTGCTGCAGATATTGGGCATGCAGCGGGAGATCAACTTGCTGCACGCACAAAACCAAGGGCTGTAGCCATATTTGTAGTTGGATTCTGGGTTCTTGATGTCGCTAACAACATGCTGCAAGGCCCTTGTAGAGCTTTGTTGGCAGATATGTCAGGTACCAACCACAAGAAGATGAGAATGGCCAATGGTTTTTTCTCCTTCTTCATGGGCGTAGGGAATGTTTTGGGTTACGCAGCTGGGTCCAATAACACACTCTATAAAGTCCTTCCCTTCACAATAACCAAAGCATGTGACACTTACTGTGCCAACCTCAAAACATGCTTCTTGATCGACATTGTGTTTCTCCTCCTCATTACCACCTTTGCCGTGTTTACAGTCAGCGAGAAGCAATTTGAGCGCTTGGAGATTGACGAAGAAGCAACACCCTTTTTCGGGAAGTTGCTTGGAGCACTCAAGAAGTTGGAGAAGCCCATGTGGATCTTGTTACTCGTAACAGCTTTGAACTGGATTGGTTGGTTCCCATTTATAATGTATGACACTGACTGGATGGGTTTGGAAGTGTACGGAGGAAAGCCAAATGGAACTCCAGAACAAGTCAAGTTCTATGACCTTGGTGTTCGTTCTGGGGCCCTTGGGTTGATGATAAACTCCTTTGTTCTAGGATTTTCAGCTTTAGCGATTGAGCCAATTAGCCGTATTCTAGGAGGTCTCAGGTGGTGGTGGGGAATTGTGAACATCATATTCACCATTTGCATGGGATCCACCGTCGTTGTTACAAAGGTTGCTGAGCGCTGGAGGTCCGTTAACGGTTTGCGCCTTCCTCCCGCGAACGTTAGGGCCGGAGCTTTTTCCATCTTTGCAGTCTTGGGTATTCCACTATCGGTCACTTTTAGCGTTCCCTTTGCACTTGCATCCATCTTTTCTTCAGAATCTGATGCGGGTCAAGGCCTCTCTTTGGGAATTCTCAACCTCTTCATTGTCATCCCACAGTTCATTGTGTCTGCAGTTAGTGGACCTTTAGATGCAGCTTTCGGAGGTGGAAACTTACCCGCATTCGTACTGGGTGGAATTGCTTCTTTTGCAAGCGCAATGTGCGCTATGTTTGTCCTTCCAGATCCACCACCTCAATCCGAAGTCTCCTTGACAATGGGGGCTGGCCATTGA 1488 47.51 MEHGDVVSKGMVSDPSSSYKKIIIVAAIAAGVQFGWALQLSLLTPYVQQLGVSHTWSAFIWLCGPLSGLIVQPTVGYYSDRCTSRFGRRRPFIAAGAGFVAAAVFLIGFAADIGHAAGDQLAARTKPRAVAIFVVGFWVLDVANNMLQGPCRALLADMSGTNHKKMRMANGFFSFFMGVGNVLGYAAGSNNTLYKVLPFTITKACDTYCANLKTCFLIDIVFLLLITTFAVFTVSEKQFERLEIDEEATPFFGKLLGALKKLEKPMWILLLVTALNWIGWFPFIMYDTDWMGLEVYGGKPNGTPEQVKFYDLGVRSGALGLMINSFVLGFSALAIEPISRILGGLRWWWGIVNIIFTICMGSTVVVTKVAERWRSVNGLRLPPANVRAGAFSIFAVLGIPLSVTFSVPFALASIFSSESDAGQGLSLGILNLFIVIPQFIVSAVSGPLDAAFGGGNLPAFVLGGIASFASAMCAMFVLPDPPPQSEVSLTMGAGH 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 19409123 19410702 - CrPI670011_11g014190.1 Cre11g1419 513164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g1419 495 PANTHER SUGAR TRANSPORTER 14 477 - GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0008506(PANTHER)|GO:0016020(PANTHER)
Cre11g1419 495 NCBIfam sucrose/proton symporter 18 482 IPR005989 GO:0005886(InterPro)|GO:0008515(InterPro)|GO:0015770(InterPro)
Cre11g1419 495 SUPERFAMILY MFS general substrate transporter 21 484 IPR036259 -
Cre11g1419 495 CDD MFS_SLC45_SUC 31 476 - -
Cre11g1419 495 Pfam MFS/sugar transport protein 28 279 - -
Cre11g1419 495 Gene3D MFS general substrate transporter like domains 16 485 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g1137 Cre-Chr8:24580666 Cre11g1419 Cre-Chr11:19409123 4.70E-125 dispersed
Cre11g1419 Cre-Chr11:19409123 Cre11g1426 Cre-Chr11:20430132 4.80E-287 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g1419 K15378 - csv:116401998 892.493