Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g1565 ATGGCAAAAGGAGGAGCTCAGAAGAAAGATGTGGCGGTGGCGATCGACAAAGACAAATGTAGTCAACAAGCTTTGAAATGGACAATCGAACGCCTTCTTAGCAGAGGCCAAGTGGTTACTCTGCTTCATGTTAAGCAGAAACCGTCTTCCTCTGCACATTCGATGACGAATATGATTGCGGATTCGGATGTGGATGAGGCCGCTCTGTATAAACAACAGCTTGATAGTCATGCCAGAGATCAGTTCTTCCTCCCTTTTCGTTGCATTTGCACAAGAAACAATATACCATGCAATGAGGTGATGTTGGATGAAGGAGAGATTCCAAAGACATTAATAAATTATGTCTTCAAAAATGTTATAGACATTTTAGTACTTGGTGCCCCTACAAGATCAATTTACAAGAGATTCAAGTCAGATGTTCCAAGCAGTGTATCAAAAGGAGCACCAGACTTCTGCACTGTTTACACTATTGGCAACAAAGGCAAGGTTTCAGTGAGACAATCCACAGCTCCACCGCCAGCAAAGCCCGTTGCTCCGCCGCGCACCCAACTGCAGCCCGCCCCACCCCGCCCTCAGCTGCTACATCAGCTCACCAATGCCTCGGAAGTTGCGGCCGAGCCGAACCAGCCACGCTCCCAAGCAGCTAAATCTTTAGATACTCAAAACAGCATAAATACTCCTCCTCGTGCCGCTCAAGAAGATTGGGACATCAAGTCACCATTTACAAGGCCTGGTTCAAGGGCTTCAATGAGCAAAGTGATGGAACCATTGACGGCGGATTCCGACATATCGTACGTCAGCAGCGGGAGGCGGAGCGTGGACCGTGGCTTCCAAGGGGCGTGGAACTCCAGCACTTGCACCAACTCGTATCGTCTTTCTAACGTCTCTGAGTTTGAAGTTTCTAGCCCCGGTCCGGCTTCGCCTATGCTGGAAATGGGAGGAGGAACCAACAAATCATCCATTGATAATACTATCAATGATGATGCTAATAATAGCAACAAAAATAGCAATGTCTCTTCTTACCCTCAAGATATGTCATTTTGCTCTTTACAAAGTGAAACATTCTCTTGGCCTTCCAATTCTCACGCTCAGGATGATGTTGAAGCTGAGATGAGAAGACTGAAATTAGAGCTCAAACAAACCATGGACATGTACAGTACAGCCTGCAAAGAAGCCCTAAACGCCAAGCAGAAGGCGATGGAGCTCCATCGCTGGAAAGTGGAAGAAGAGCAAAGGTTAGAAGAGGCGAGAATGGGAGGGGAAGCAGCATTAGCAATGGCGGAGAAGGAGAAGATGAAATGCAAAGCAGCGATGGAGGCAGCTGAAGCGGCACAAAAGATCGCAGTACTTGAGGCGAGGAAAAGAGCGAACGCGGAGAAAATGGTGGACATGGAAGCACAAGAAACGAAAAGAACACTTTCGCTTTCAGGATTCGGCCATGGAGAAATCGGTTACAGAAGGTACACAATCCAGGAAATCGAAACTGCCACGAAAGGCTTCTCTGATTCTCTAAAGATCGGTGAAGGCGGTTACGGTCCAGTCTTTCGTGGAGAACTTGACCACACACCGGTGGCGATCAAGGTTCTCCGGCCGGATGCTGCTCACGGACGATCACAATTTCAGCAAGAGGTTGAAGTTCTAAGTTGTATTCGTCATCCAAACATGGTTCTCCTTCTTGGAGCGTGTCCTGAAAACGGTTGTTTAGTTTACGAATTCATGGCGAATGGAAGCTTAGAAGACTGTCTCTTTCGAAAAGCGAATGATCCAATTCTTTCATGGCAGTTACGATTCCGAATCGCGGCGGAGATCGCAACCGGACTTCTCTTCCTACACCAGACCAGACCAGAACCGATTGTACACCGCGATCTGAAACCAGGGAACATTTTGCTAGATAGGAACTACGTGAGCAAAATCAGTGACGTCGGACTGGCGAGGCTGGTTCCTCCATCAGTGGCCGATTCAGTGACTCAATATCGGATGACAGCAACGGCAGGGACATTCTTCTACATCGATCCAGAGTATCAGCAAACAGGATTGCTAGGGATTAAATCGGACATTTACTCGTTGGGCGTGATGCTTCTGCAAATAATCACAGCCAGGCCCCCAATCGGACTGGCGCACGCTGTCGAAAGGGCGATTGAGAAGGGGACATTTGCAGAGATGCTTGATCCAGATGTGAAGGACTGGCCGGTTGAAGACGCGTTGAAGTTTGCGAAACTTTCAATTAAGTGCGCAGAAATGAGGAAGAGAGATCGACCAGATCTTGGGAAGGTGGTGCTGCCGGAGCTTAATCGGTTGAGAACAATGGCGGAGGAGAGTATGGGACTTCGGTCGTTCAGCGGTTGTAGTACGTGTTCATCCCCATATGCAAGCCAAACTTCTCAGGAAATGATAAGTAATGTAAATCTGGGGCATTGTGGAGCATGGGTTGAGAGCTCAAGCAGCCAATCAGATAGCAGCATGTCATCATACTCAGGCAAAAGACCTTATTGGCTGGACTAG 2502 48.08 MAKGGAQKKDVAVAIDKDKCSQQALKWTIERLLSRGQVVTLLHVKQKPSSSAHSMTNMIADSDVDEAALYKQQLDSHARDQFFLPFRCICTRNNIPCNEVMLDEGEIPKTLINYVFKNVIDILVLGAPTRSIYKRFKSDVPSSVSKGAPDFCTVYTIGNKGKVSVRQSTAPPPAKPVAPPRTQLQPAPPRPQLLHQLTNASEVAAEPNQPRSQAAKSLDTQNSINTPPRAAQEDWDIKSPFTRPGSRASMSKVMEPLTADSDISYVSSGRRSVDRGFQGAWNSSTCTNSYRLSNVSEFEVSSPGPASPMLEMGGGTNKSSIDNTINDDANNSNKNSNVSSYPQDMSFCSLQSETFSWPSNSHAQDDVEAEMRRLKLELKQTMDMYSTACKEALNAKQKAMELHRWKVEEEQRLEEARMGGEAALAMAEKEKMKCKAAMEAAEAAQKIAVLEARKRANAEKMVDMEAQETKRTLSLSGFGHGEIGYRRYTIQEIETATKGFSDSLKIGEGGYGPVFRGELDHTPVAIKVLRPDAAHGRSQFQQEVEVLSCIRHPNMVLLLGACPENGCLVYEFMANGSLEDCLFRKANDPILSWQLRFRIAAEIATGLLFLHQTRPEPIVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADSVTQYRMTATAGTFFYIDPEYQQTGLLGIKSDIYSLGVMLLQIITARPPIGLAHAVERAIEKGTFAEMLDPDVKDWPVEDALKFAKLSIKCAEMRKRDRPDLGKVVLPELNRLRTMAEESMGLRSFSGCSTCSSPYASQTSQEMISNVNLGHCGAWVESSSSQSDSSMSSYSGKRPYWLD 833
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 25312035 25319442 + CrPI670011_11g015650.1 Cre11g1565 513310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g1565 833 Gene3D Transferase(Phosphotransferase) domain 1 573 778 - -
Cre11g1565 833 Coils Coil 364 384 - -
Cre11g1565 833 Gene3D Phosphorylase Kinase; domain 1 482 572 - -
Cre11g1565 833 MobiDBLite consensus disorder prediction 313 340 - -
Cre11g1565 833 ProSiteProfiles Protein kinase domain profile. 500 763 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g1565 833 SMART serkin_6 500 763 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g1565 833 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 478 572 - -
Cre11g1565 833 MobiDBLite consensus disorder prediction 192 229 - -
Cre11g1565 833 MobiDBLite consensus disorder prediction 172 187 - -
Cre11g1565 833 MobiDBLite consensus disorder prediction 298 340 - -
Cre11g1565 833 MobiDBLite consensus disorder prediction 163 251 - -
Cre11g1565 833 CDD STK_N 11 161 - -
Cre11g1565 833 Pfam Protein kinase domain 503 754 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g1565 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g1565 833 SUPERFAMILY Protein kinase-like (PK-like) 479 759 IPR011009 -
Cre11g1565 833 Gene3D HUPs 9 157 IPR014729 -
Cre11g1565 833 FunFam U-box domain-containing protein 51 573 773 - -
Cre11g1565 833 MobiDBLite consensus disorder prediction 812 833 - -
Cre11g1565 833 Pfam Universal stress protein family 10 136 IPR006016 -
Cre11g1565 833 PANTHER OS02G0152300 PROTEIN 11 784 IPR051348 -
Cre11g1565 833 Coils Coil 424 444 - -
Cre11g1565 833 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 9 137 - -
Cre11g1565 833 MobiDBLite consensus disorder prediction 812 826 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g1195 Cre-Chr8:25226650 Cre11g1565 Cre-Chr11:25312035 1.10E-216 dispersed
Cre09g0072 Cre-Chr9:967500 Cre11g1565 Cre-Chr11:25312035 1.30E-153 dispersed
Cre09g2062 Cre-Chr9:39670722 Cre11g1565 Cre-Chr11:25312035 7.70E-99 dispersed
Cre11g0662 Cre-Chr11:3696276 Cre11g1565 Cre-Chr11:25312035 3.90E-104 dispersed
Cre11g1565 Cre-Chr11:25312035 Cre04g0731 Cre-Chr4:25517845 1.60E-48 dispersed
Cre11g1565 Cre-Chr11:25312035 Cre08g0940 Cre-Chr8:22594997 4.90E-183 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64556 PF07714 PK_Tyr_Ser-Thr 5.00E-37 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g1565 - - - 0.0