Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g1573 ATGCTTCTTGTTTCTCTTGTTACTAAGTTCATATTCCCCATGTCTCCACTTGCTTTCGGAGTCACAATCTTCATTGCTCCTCTCTTTACTTATATCATCTCTTCCATGGCCTTCTCCTCCAACCTTCCTCCTGGCCCTCTCTCCATTCCCATCTTTGGCAATTGGCTCCAAGTTGGTAATGATCTCAACCATCGCCTTCTTGCTTCCTTGTGCAAGAGATTTGGCTCCATATTCCTCTTAAAGCTCGGCTCCAAGAACCTCGTTGTTGTGTCTGATGCCGAGCTTGCTAGCCAAGTTCTCCATGCTCAAGGCGTTGAGTTTGGCTCTCGCCCTCGAAATGTCGTGTTTGATATCTTCACTGGAAATGGTCAAGATATGGTGTTTACCGTTTATGGAGACCATTGGCGTAAGATGCGTAGAATCATGACATTGCCGTTTTTTACGAACAAAGTGGTGCATAACTACAGTGACATGTGGGAAGATGAGATGGACTCTGTGGTTCGCGACCTTAAGAGTAACAAGAAGTTTCAATCAGAAGGGATAGTCATTAGAAAGCGTTTGCAATTGATGTTGTACAATATCATGTATAGAATGATGTTTGATGCAAAGTTTGAGTCCCAAGACGATCCTTTGTTCATTGAAGCAAACTGA 651 43.47 MLLVSLVTKFIFPMSPLAFGVTIFIAPLFTYIISSMAFSSNLPPGPLSIPIFGNWLQVGNDLNHRLLASLCKRFGSIFLLKLGSKNLVVVSDAELASQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVHNYSDMWEDEMDSVVRDLKSNKKFQSEGIVIRKRLQLMLYNIMYRMMFDAKFESQDDPLFIEAN 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 25477366 25478016 + CrPI670011_11g015730.1 Cre11g1573 513318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g1573 216 SUPERFAMILY Cytochrome P450 40 215 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g1573 216 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 22 215 - GO:0004497(PANTHER)
Cre11g1573 216 Gene3D Cytochrome P450 37 215 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g1573 216 Pfam Cytochrome P450 43 213 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g1573 216 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g1573 216 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g1573 216 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre11g1573 Cre-Chr11:25477366 Cre11g1575 Cre-Chr11:25483812 1.80E-68 dispersed
Cre11g1572 Cre-Chr11:25465654 Cre11g1573 Cre-Chr11:25477366 2.50E-116 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g1573 K00487 - csv:105434566 412.535