Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre11g1575 | ATGATCTCAACCATCGCCTTCTTGCTTCTTTGTCACAAAAATACGGCTGTCTTCCGACTCAAACTTGGTTACAAGAATCTAGTTGTGGTGTCTGATGCCGAGCTTGCTAACCAAGTCCTCCATGCTCAAGGTGTGGAGTTTGGATCTCGTCCACGAAATGTTGTCTTCGACATTTTCACTGGTAATGGACAAGATATGGTGTTCACCGTTTATGGCAACCATTGGCGTAAAATGCGTAGAATTATGACACTGCCATTTTTTACAAACAAAGTTGTGCATAACTACAGTGGCATGTGGGAGGAAGAAATGGATTTAGTTGTTCATGATCTTATGAATAACCCAAAGGTAAAATCTGAAGGGTTAGTCATAAGAAAGCGTTTACAACTGATGTTGTACAATATCATGTATAGAATGATGTTTGATACTAAATTTGAATCTCAAGATGATCCTTTGTTTATTGAGGCAACTAAATTCAATTTTGAAAGAAGTCGATTGGCACAAAGTTTTGAATACAATTATGGAGATTTCATTCGTCTGCTTAGACCCTTTTTGAGGGGTTACTTGAACAAATGCAAGGATTTGCAAAGCAGGAGGTTGGCATTTTTCAACAATAACTATGTTGAGAAAAGAAGAAAAATTATGGCTGCCAATGGAGACAAGCACAGGATAAGTTGTGCTATGGATCATATTATAGATGCTCAGCTAAAAGGAGAAATTAGTGAAGAGAATGTGATATACATTGTGGAGAATATTAATGTTGCAGCAATAGAGACGACACTTTGGTCGATGGAGTGGGCAATAGCTGAGTTGGTAAACCATCCAACTGTACAACAAAATATCCGAGAGGAAATCTCAACCATCCTAAAAGGAAAGGAAGTCACAGAATCTAACTTACATGAGCTGCCATATCTGCAAGCCACAGTGAAAGAGACATTGAGACTGCACACACCAATACCTTTATTAGTTCCACATATGAACTTGGAAGAAGCCAAGCTTGGAGGCTACACAATTCCAAAAGAGTCTAAGGTGGTGGTAAATGCATGGTGGTTGGCCAATAACCCAGCATGGTGGAAAAATCCAGAGGAATTCAGGCCAGAGAGGTTCCTTCAAGAAGAAAGTAGCACAGAAGCTGTAGCAGGAGGCAAAGTTGACTTCCGATTCTTACCATTTGGTGTTGGAAGGAGAAGTTGCCCTGGAATTGTTTTGGCGCTGCCAATCTTGGGATTGATCATTGCTAAGTTGGTGACCAATTTTGAAATGAAGCCTCCAATTGGCATGGAGAAGATTGATGTGAGCGAAAGAGGAGGACAATTCAGTTTACATATTGCCAACCACTCAACTGTGGCATTCAAACCTATAACTGCTTAG | 1368 | 40.13 | MISTIAFLLLCHKNTAVFRLKLGYKNLVVVSDAELANQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGNHWRKMRRIMTLPFFTNKVVHNYSGMWEEEMDLVVHDLMNNPKVKSEGLVIRKRLQLMLYNIMYRMMFDTKFESQDDPLFIEATKFNFERSRLAQSFEYNYGDFIRLLRPFLRGYLNKCKDLQSRRLAFFNNNYVEKRRKIMAANGDKHRISCAMDHIIDAQLKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPTVQQNIREEISTILKGKEVTESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGYTIPKESKVVVNAWWLANNPAWWKNPEEFRPERFLQEESSTEAVAGGKVDFRFLPFGVGRRSCPGIVLALPILGLIIAKLVTNFEMKPPIGMEKIDVSERGGQFSLHIANHSTVAFKPITA | 455 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 25483812 | 25485323 | + | CrPI670011_11g015750.1 | Cre11g1575 | 513320 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre11g1575 | 455 | PANTHER | TRANS-CINNAMATE 4-MONOOXYGENASE | 10 | 454 | - | GO:0004497(PANTHER) | |
| Cre11g1575 | 455 | Pfam | Cytochrome P450 | 14 | 443 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g1575 | 455 | SUPERFAMILY | Cytochrome P450 | 10 | 435 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g1575 | 455 | PRINTS | E-class P450 group I signature | 130 | 148 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g1575 | 455 | PRINTS | E-class P450 group I signature | 305 | 323 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g1575 | 455 | PRINTS | E-class P450 group I signature | 346 | 370 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g1575 | 455 | PRINTS | E-class P450 group I signature | 387 | 397 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g1575 | 455 | PRINTS | E-class P450 group I signature | 397 | 420 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g1575 | 455 | PRINTS | E-class P450 group I signature | 35 | 56 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g1575 | 455 | PRINTS | E-class P450 group I signature | 263 | 289 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g1575 | 455 | PRINTS | E-class P450 group I signature | 11 | 30 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g1575 | 455 | PRINTS | E-class P450 group I signature | 243 | 260 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g1575 | 455 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 390 | 399 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cre11g1575 | 455 | Gene3D | Cytochrome P450 | 4 | 452 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g1575 | 455 | PRINTS | P450 superfamily signature | 306 | 317 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g1575 | 455 | PRINTS | P450 superfamily signature | 388 | 397 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g1575 | 455 | PRINTS | P450 superfamily signature | 254 | 271 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre11g1572 | Cre-Chr11:25465654 | Cre11g1575 | Cre-Chr11:25483812 | 6.20E-232 | dispersed | |
| Cre11g1573 | Cre-Chr11:25477366 | Cre11g1575 | Cre-Chr11:25483812 | 1.80E-68 | dispersed | |
| Cre11g1575 | Cre-Chr11:25483812 | Cre10g1760 | Cre-Chr10:31998110 | 1.10E-56 | dispersed | |
| Cre11g1574 | Cre-Chr11:25478294 | Cre11g1575 | Cre-Chr11:25483812 | 1.80E-58 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre11g1575 | K00487 | - | csv:101205775 | 845.114 |