Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g1583 ATGCCATCGCTTAAGGGCTCTCCGTACGCTAGACGGAGTGATGTGGAGTCCGGTAGCAGCAATTCCGGCGACGCGGAGGAGGAGGATTTATCTAATCCTTTTGAAATTCACACCACTAAGCATGCTTCTGTTGACAGACTCCGCCGCTGGAGACAAGCTGCGCTAGTGTTAAATGCTTCTCGTCGTTTTCGGTATACTTTAGACTTGAAAAAGGAAGAAGAGAAGAAAGAAGCTTTGAGAAAGATTAGAGCACATGCACAAGCCATACGAGCTGCATATCTCTTTAAAGAGGCTGGGGATCGTGTAACAGGACCAGGGCCTGCAGCAGTGGAAGCTCCAAATGGTGATTTTTCAGTTGGACCAGAGCAACTGGCTGTGTTGGTAAAGGATCGTAATGTTGAAGCTCTGGAGCAGTATGGAGGGGTTAAAGGGGTAGCAGATATGTTACAATCAAATTTAGAGAAGGGGATAATTGGTGATGATTCTGATTTATTGAAACGGAGAAACACATATGGTTCAAACACATATCCCCAGAAACCGGGAAGGAGTTTTTGGAGGTTTCTCTGGGAAGCTTGGCAAGATCTTACATTGATCATATTGATGATAGCTGCTGTTGCTTCGTTGGTGCTAGGCATAAAGACTGAGGGAATCAAGGAAGGCTGGTATGATGGTGGAAGCATTGCTTTTGCTGTTATTCTTGTCATTGTCGTAACAGCTATTAGTGACTATCGACAATCTCTTCAATTTCAGAACTTGAATAAGGAGAAGAGGAACATACAAGTGGAGGTCGTTAGGGGTGGCCGTCGAATTGAGGTCTCAATTTATGACATCGTTGTTGGTGATGTTATACCGCTCAATATTGGTGATCAGGTCCCTGCTGATGGCATCCTAATTTCTGGACACTCACTTGCTATTGATGAATCAAGCATGACTGGAGAGAGCAAGATTGTTCAAAAGCATGGTAAGGAACCGTTCCTGATGTCTGGATGCAAAGTAGCTGATGGTAGTGGTACCATGCTGGTTACAAGTGTTGGAGTTAATACTGAATGGGGTTTGCTTATGGCAAGTATTTCTGAAGACAACGGCGAGGAAACTCCTTTGCAGGTGCGTTTAAATGGTGTGGCAACTTTAATTGGTATTGTTGGACTCACGGTAGCTTTTGCTGTCTTGATTGTGCTCCTTACAAGGTATTTCACTGGTCACACCAAAAATCCAGATGGAAGCCGTCAGTTTATTCCAGGCCAGACAAAAGTTGGTCGTGCCGTTGACGGGGCCATCAAAATTGTCACTATTGCGGTGACCATTGTTGTGGTTGCTGTGCCGGAAGGGCTTCCACTAGCTGTAACCTTAACTCTTGCTTACTCAATGAGAAAGATGATGGCAGACAAGGCATTGGTGCGGAGGCTATCAGCATGTGAGACGATGGGGTCTGCTACAACTATTTGTAGTGATAAGACTGGAACCTTAACTTTAAATCAGATGACCATTGTTGAGGCTTATGCTGGTGGGAAGAAGATTGATCCGCCAGAGAAGAAGTCAGAGTTGTCTCCTATGTTACACTCTACACTTATTGAAGGCATTGCTCTAAACTCAAATGGCAGTGTATATATGCCTGAGAGTGGTGGAGAGGTAGAGGTTACAGGATCACCAACAGAGAAGGCTATTCTTAATTGGGGTATCAAGCTGGGAATGAACTTTGAAGCACTTCGATCAGAATCTGCAATTCTTCACGTCTTCCCCTTCAGCTCAGATAAAAAACGTGGTGGTGTTGCAGGTCAACGGGATGATCAAGTCCGTGTACACTGGAAAGGTGCTGCTGAGATAGTCTTAGCATCGTGCACACAGTATATGGATGAACATGATCAATCTGTTCAATTAGATGAAGATAAGATGAAGTATTTTAAAAGCGCTATCGAAGATATGGCTTCACGTAGTTTACGTTGTGTTGCAATTGCATATAGACCTGTTGAACCTGAGAATGTTCCTGATGGCGAAGAACAATTGAGTAAGTGGGCTCTACCAGAAGACGACCTTGTGTTGTTGGCTATAGTTGGTTTGAAGGACCCCTGCCGACCAGGAGTAAAAGATGCAGTACGACTTTGCCAAAAGGCTGGTGTTAAGGTGCGCATGGTCACTGGTGATAATGTTCAAACTGCTAGAGCTATTGCATTGGAATGTGGAATACTTGGTTCAGATTCAGATGCTACTGAACCAAATCTTATTGAAGGAAAAGTATTCCGTGCCCTATCTGATGCCCAAAGAGAAGAAGTTGCTGAGAAAATATCAGTGATGGGCCGATCCTCCCCCAATGATAAGCTTCTCCTTGTGCAAGCGTTGAGAAAGAAAGGACATGTAGTTGCTGTTACTGGAGATGGTACAAATGATGCTCCTGCATTGCATGAGGCAGATATTGGTCTTGCAATGGGAATTCAGGGGACAGAAGTTGCCAAAGAAAGCTCCGATATTATTATTTTAGATGACAACTTTGCTTCTGTTGTGAAGGTTGTAAGGTGGGGCCGATCAGTATATGCAAATATTCAGAAATTCATTCAGTTTCAGCTTACTGTTAATGTTGCAGCACTCATTATAAATGTCGTGGCAGCAGTATCCTCTGGTGATGTCCCACTAAATGCTGTGCAGCTTTTGTGGGTTAATCTTATCATGGACACTCTCGGAGCATTAGCTTTGGCTACCGAACCACCAACCAATCACCTTATGGACAGATCGCCAGTTGGTAGAAGAGAACCTCTCATAACAAATATCATGTGGAGGAACCTCCTGATACAGGCATTTTATCAAGTCACTGTGTTGCTCGTCCTCAATTTTCGTGGTCGGAGTTTGCTTCATTTGAACCACTCTAATTTAGAAGCTATCAAAGTGAAGAATACATTGATTTTCAATGCATTTGTACTTTGTCAAATTTTCAACGAGTTTAATGCTCGAAAACCTGATGAGAAGAATATATTCAAAGGAGTCACTAAAAATTATCTCTTCATCGGGATCATTGCAATTACTGTCATCCTCCAGGTGATAATAATCGAGTTTCTTGGGAAATTCACATCCACGGTAAGGCTAAATTGGAAATATTGGATTATTTCCATAATCATTGGCGTTATCAGTTGGCCTCTTGCTCTTCTTGGGAAATTCATACCTGTTCCTGAAACTCCCTTCCATGTGCTCATTATCAGAATGTTCCGTAAACGACAACCTGGGGGAGATTGTAGGATGGCAGTTTTTAGGACCCTGAGCAACACTCACCTTGACGCTGAGATGGCATATTGTGGGAATTGTTTTTTTGTGCTTCTAAAGGGCAATCGTTCTGAGGGATCGTAA 3333 43.32 MPSLKGSPYARRSDVESGSSNSGDAEEEDLSNPFEIHTTKHASVDRLRRWRQAALVLNASRRFRYTLDLKKEEEKKEALRKIRAHAQAIRAAYLFKEAGDRVTGPGPAAVEAPNGDFSVGPEQLAVLVKDRNVEALEQYGGVKGVADMLQSNLEKGIIGDDSDLLKRRNTYGSNTYPQKPGRSFWRFLWEAWQDLTLIILMIAAVASLVLGIKTEGIKEGWYDGGSIAFAVILVIVVTAISDYRQSLQFQNLNKEKRNIQVEVVRGGRRIEVSIYDIVVGDVIPLNIGDQVPADGILISGHSLAIDESSMTGESKIVQKHGKEPFLMSGCKVADGSGTMLVTSVGVNTEWGLLMASISEDNGEETPLQVRLNGVATLIGIVGLTVAFAVLIVLLTRYFTGHTKNPDGSRQFIPGQTKVGRAVDGAIKIVTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTIVEAYAGGKKIDPPEKKSELSPMLHSTLIEGIALNSNGSVYMPESGGEVEVTGSPTEKAILNWGIKLGMNFEALRSESAILHVFPFSSDKKRGGVAGQRDDQVRVHWKGAAEIVLASCTQYMDEHDQSVQLDEDKMKYFKSAIEDMASRSLRCVAIAYRPVEPENVPDGEEQLSKWALPEDDLVLLAIVGLKDPCRPGVKDAVRLCQKAGVKVRMVTGDNVQTARAIALECGILGSDSDATEPNLIEGKVFRALSDAQREEVAEKISVMGRSSPNDKLLLVQALRKKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTNHLMDRSPVGRREPLITNIMWRNLLIQAFYQVTVLLVLNFRGRSLLHLNHSNLEAIKVKNTLIFNAFVLCQIFNEFNARKPDEKNIFKGVTKNYLFIGIIAITVILQVIIIEFLGKFTSTVRLNWKYWIISIIIGVISWPLALLGKFIPVPETPFHVLIIRMFRKRQPGGDCRMAVFRTLSNTHLDAEMAYCGNCFFVLLKGNRSEGS 1110
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 25790856 25811259 - CrPI670011_11g015830.1 Cre11g1583 513328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g1583 1110 Pfam Cation transporter/ATPase, N-terminus 139 207 IPR004014 -
Cre11g1583 1110 PANTHER CATION TRANSPORTING ATPASE 90 1052 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Cre11g1583 1110 ProSitePatterns E1-E2 ATPases phosphorylation site. 484 490 IPR018303 -
Cre11g1583 1110 Pfam Cation transporting ATPase, C-terminus 874 1050 IPR006068 -
Cre11g1583 1110 SUPERFAMILY Calcium ATPase, transmembrane domain M 139 1052 IPR023298 -
Cre11g1583 1110 SMART Cation_ATPase_N_a_2 138 212 IPR004014 -
Cre11g1583 1110 FunFam Calcium-transporting ATPase 190 247 - -
Cre11g1583 1110 NCBIfam HAD-IC family P-type ATPase 756 869 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cre11g1583 1110 NCBIfam HAD-IC family P-type ATPase 227 399 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cre11g1583 1110 NCBIfam HAD-IC family P-type ATPase 422 505 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cre11g1583 1110 SFLD p-type atpase 464 841 IPR044492 -
Cre11g1583 1110 PRINTS P-type cation-transporting ATPase superfamily signature 682 693 - -
Cre11g1583 1110 PRINTS P-type cation-transporting ATPase superfamily signature 704 714 - -
Cre11g1583 1110 PRINTS P-type cation-transporting ATPase superfamily signature 789 808 - -
Cre11g1583 1110 PRINTS P-type cation-transporting ATPase superfamily signature 482 496 - -
Cre11g1583 1110 PRINTS P-type cation-transporting ATPase superfamily signature 813 825 - -
Cre11g1583 1110 PRINTS P-type cation-transporting ATPase superfamily signature 306 320 - -
Cre11g1583 1110 Gene3D - 164 358 - -
Cre11g1583 1110 NCBIfam calcium-translocating P-type ATPase, PMCA-type 132 1052 IPR006408 GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro)
Cre11g1583 1110 Pfam Ca2+-ATPase N terminal autoinhibitory domain 31 74 IPR024750 GO:0005516(InterPro)
Cre11g1583 1110 FunFam Calcium-transporting ATPase 683 834 - -
Cre11g1583 1110 CDD P-type_ATPase_Ca_PMCA-like 164 922 - -
Cre11g1583 1110 FunFam Calcium-transporting ATPase 237 358 - -
Cre11g1583 1110 MobiDBLite consensus disorder prediction 1 36 - -
Cre11g1583 1110 PRINTS Sodium/potassium-transporting ATPase signature 600 618 - -
Cre11g1583 1110 PRINTS Sodium/potassium-transporting ATPase signature 225 245 - -
Cre11g1583 1110 PRINTS Sodium/potassium-transporting ATPase signature 475 496 - -
Cre11g1583 1110 FunFam Calcium-transporting ATPase 492 689 - -
Cre11g1583 1110 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 489 686 IPR023299 GO:0000166(InterPro)
Cre11g1583 1110 Gene3D - 42 98 - -
Cre11g1583 1110 FunFam Calcium-transporting ATPase 42 98 - -
Cre11g1583 1110 SUPERFAMILY HAD-like 480 894 IPR036412 -
Cre11g1583 1110 Gene3D - 492 689 IPR023299 GO:0000166(InterPro)
Cre11g1583 1110 Gene3D - 190 1041 - -
Cre11g1583 1110 SFLD Haloacid Dehalogenase 464 841 - -
Cre11g1583 1110 Pfam haloacid dehalogenase-like hydrolase 480 803 - -
Cre11g1583 1110 Pfam E1-E2 ATPase 259 460 - -
Cre11g1583 1110 MobiDBLite consensus disorder prediction 13 27 - -
Cre11g1583 1110 SUPERFAMILY Calcium ATPase, transduction domain A 259 355 IPR008250 -
Cre11g1583 1110 Coils Coil 69 89 - -
Cre11g1583 1110 FunFam Calcium-transporting ATPase 9 plasma membrane-type 336 506 - -
Cre11g1583 1110 Gene3D - 479 834 IPR023214 -
Cre11g1583 1110 FunFam Calcium-transporting ATPase 806 1054 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1971 Cre-Chr2:33129164 Cre11g1583 Cre-Chr11:25790856 2.40E-285 dispersed
Cre03g0492 Cre-Chr3:3418191 Cre11g1583 Cre-Chr11:25790856 1.60E-98 dispersed
Cre04g1382 Cre-Chr4:32638277 Cre11g1583 Cre-Chr11:25790856 9.00E-249 dispersed
Cre09g0145 Cre-Chr9:1695357 Cre11g1583 Cre-Chr11:25790856 0.00E+00 dispersed
Cre10g1703 Cre-Chr10:31221713 Cre11g1583 Cre-Chr11:25790856 7.50E-266 dispersed
Cre11g0843 Cre-Chr11:5599319 Cre11g1583 Cre-Chr11:25790856 2.00E-37 dispersed
Cre11g1583 Cre-Chr11:25790856 Cre11g1632 Cre-Chr11:27210333 1.70E-42 dispersed
Cre11g1583 Cre-Chr11:25790856 Cre09g0700 Cre-Chr9:6774237 5.50E-291 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g1583 K01537 - csv:101211703 1943.7