Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre11g1622 | ATGGGTGAGGATGCAATGGAGAAGATCAATAAGAAATTAATGAGAGAAAACAAATTGCAAAGAAGCCATTTTGATGTGTTGGGAATTTGCTGTTCTTCAGAAGTTCCTTTGATTGAAAACATCCTCAAACCCCTCGAAGGAATCAAACAAATCTCTGTCATTGTCCCTACAAGAACTCTTATTGTCGTTCATGATTCCCTCCTCATTTCCCAACTTCAAATTGTCAAAGCTCTGAATGAAGCAAGATTAGAGGCAAATATACAATTAAATGGAAAGGGAATTAGCAAGAAGAAATGGCCAAGTCCTTTTGCAATAGCCAGTGGATTGCTTCTAACGGCGTCGTTTTTGAAGTATGTGTACCACCCATTGCGGTGGCTTGCCGTCGCCGCCGTTGCCGCCGGCATCTTTCCCATTCTTCTAAAAGCCATTTCCGCCATTCGCCACCTCAGAATTGATGTCAACATTCTTGCTATTATTGCTGTTGTGGGGACAATTGCAATGGATGATTACATGGAAGCTGGAAGTATAGTGTTTTTGTTTTCCATTGCTGAATGGCTTGAGTCAAGAGCAAGCCACAAGGCGAATGCTGCAATGAGTTCATTGATGAGGGTAGCCCCTGAAAAAGCGATTATAGCTGAAAGTGGAGAGGTTGTGGATACAAAAGAGGTGAAATTGAACAGTGTATTGGCTGTGAAGGCTGGGGAAGTTATTCCCATTGATGGTATTGTTGTGGAAGGAAAATGTGAAGTTGATGAGAAAACTTTGACTGGAGAAACATTCCCAGTTCCCAAACACAAACATTCTCTTGTTTGGGCTGGTACCATCAACTTAAATGGTTATATCAGTGTTCAAACTACAGTTGTTGCTGAGGATTGTGTGGTAGCAAAAATGGCTGAGCTTGTAGAAGAAGCTCATAATAACAAATCAAAAACTCAGAGATTCATTGATGAATGTGCCAAATATTACACCCCTGCTGTTGTTATGATATCAGCTTGTCTAGCAGCCATTCCAGCTGCATTGAGAGTTCATAATATCAGCCATTGGCTTCACTTAGCTTTGGTGGTCTTAGTGAGTGCATGTCCCTGTGCCCTAATTCTCTCCACCCCGGTCGCCGCCTTTTGCGCCCTTACGAAGGCTGCCATGGCCGGAGTTTTGATCAAAGGCAGCGACCACCTTGAAGTTCTTTCAAAGATTAAGGTTATGGCCTTTGATAAAACTGGCACAATCACTAGAGGTGAATTTGTTGTAACACATTTTCAAGCTCTAAGAGATGATATTAGCTTCCACACCTTGCTCCAATGGGTTTCAAGCATCGAGAGCAAATCAAGCCATCCAATGGCAGCTGCCCTTGTGAACCATGGAAAGTTGTTTTCTATTGATCTTAAACCCGAAAGCGTTGAGGAATTTGAAAATTTTCCAGGAGAGGGTGTTCGTGGGAAGATGGATGGGAATGATATTTACATTGGAAGTAAGAAAATTGGTGATAGAGCTGGCTACCACACACCAGATTTGAAGTTATTTGATGATGAAACAAAACAAGAGCAAACCCTGGGATATGTATTTTGTGGGGGGACGTTAATTGGATCCTTCGGTCTTTCGGATTCGTGTCGTTCTGGAGTCAAAGAGGCAATCCAGGAGATTAAGAGTTTTGGTATTAAAACTGCTATGCTCACCGGAGATTGTAGTGCAGCTGCCATGCATGCCCAAGAACAGCTCGGGAATGCGTTCGATGTAATCCATTCACAACTTCTACCAAAGGAGAAGGCAAATATCATAAAAGAATTTAAAAAGGATGGAGCAATAATTGCCATGGTTGGAGATGGCTTAAATGATACTCCAGCATTAGCCACTGCTGATATTGGCATATCAATGGGTGTTTCAGGTTCAGCATTGGCCACTCAAACTGGGAATGTGATCTTAATGTCAAATGACATGAGAAAAATTCCAAAAGCCATCAAACTAGCAAAGAAATTCCATACAAAAGTAGTTCAAAATGTCATTTTGTCAATTGGTACCAAGACTGCCATCCTCGGCCTAGCATTCGCCGGACATCCGCTCGTTTGGGCAGCTGTTCTCGCCGATGTCGGTACTTGCCTAATGGTCATCTTGAATAGCATGCTCCTTTTGAGAGGAATTGATCACAAACATGGGAAGAAATGTTGCAAATCTTCCAAGTCATGCTTGGCAAAACATGGACCACGATGCGATGGTCGTAGCACTCGATTGTCTCATCATCACGAGCATCATCATCATCACTACAATCATCGATGCCATATCGTCGATGATCAATCGCCTAGTCGAGAGAATAATCATATCCATAAGCATTGTTGTTTTGAGAAAAAGGATCATAAGATTCAGCTTTCTGATCAAGATCACAATAAAAAAAATTGTGGAATGAATCACGAGAAGAATCATGATCAATATGGTGATCATGAATGTGAAGAAACTAATGTGCCTAGTAAAAAAGAACATAAATTTCATCACAACCACCATTCAAATCAATGTGAGAAAGAGAGTAATGGAACTTCTTCAAAGAAAGTGGCTGAATCAAATTGTAATTGCCACTCACATCATATTGCTATTGAGATTCATGAAGGTAATGAAGGTGAGAGAGAAGAGCATAAATAA | 2628 | 41.25 | MGEDAMEKINKKLMRENKLQRSHFDVLGICCSSEVPLIENILKPLEGIKQISVIVPTRTLIVVHDSLLISQLQIVKALNEARLEANIQLNGKGISKKKWPSPFAIASGLLLTASFLKYVYHPLRWLAVAAVAAGIFPILLKAISAIRHLRIDVNILAIIAVVGTIAMDDYMEAGSIVFLFSIAEWLESRASHKANAAMSSLMRVAPEKAIIAESGEVVDTKEVKLNSVLAVKAGEVIPIDGIVVEGKCEVDEKTLTGETFPVPKHKHSLVWAGTINLNGYISVQTTVVAEDCVVAKMAELVEEAHNNKSKTQRFIDECAKYYTPAVVMISACLAAIPAALRVHNISHWLHLALVVLVSACPCALILSTPVAAFCALTKAAMAGVLIKGSDHLEVLSKIKVMAFDKTGTITRGEFVVTHFQALRDDISFHTLLQWVSSIESKSSHPMAAALVNHGKLFSIDLKPESVEEFENFPGEGVRGKMDGNDIYIGSKKIGDRAGYHTPDLKLFDDETKQEQTLGYVFCGGTLIGSFGLSDSCRSGVKEAIQEIKSFGIKTAMLTGDCSAAAMHAQEQLGNAFDVIHSQLLPKEKANIIKEFKKDGAIIAMVGDGLNDTPALATADIGISMGVSGSALATQTGNVILMSNDMRKIPKAIKLAKKFHTKVVQNVILSIGTKTAILGLAFAGHPLVWAAVLADVGTCLMVILNSMLLLRGIDHKHGKKCCKSSKSCLAKHGPRCDGRSTRLSHHHEHHHHHYNHRCHIVDDQSPSRENNHIHKHCCFEKKDHKIQLSDQDHNKKNCGMNHEKNHDQYGDHECEETNVPSKKEHKFHHNHHSNQCEKESNGTSSKKVAESNCNCHSHHIAIEIHEGNEGEREEHK | 875 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 27042233 | 27050551 | - | CrPI670011_11g016220.1 | Cre11g1622 | 513367 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre11g1622 | 875 | Gene3D | - | 413 | 536 | IPR023299 | GO:0000166(InterPro) | |
Cre11g1622 | 875 | Gene3D | - | 394 | 656 | IPR023214 | - | |
Cre11g1622 | 875 | CDD | P-type_ATPase_HM | 103 | 707 | - | - | |
Cre11g1622 | 875 | FunFam | Copper-transporting ATPase 1, putative | 191 | 305 | - | - | |
Cre11g1622 | 875 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 154 | 396 | IPR023298 | - | |
Cre11g1622 | 875 | FunFam | Putative cadmium/zinc-transporting ATPase 3 | 413 | 536 | - | - | |
Cre11g1622 | 875 | PANTHER | CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED | 14 | 838 | IPR051014 | GO:0016020(PANTHER)|GO:0022857(PANTHER)|GO:0055085(PANTHER) | |
Cre11g1622 | 875 | MobiDBLite | consensus disorder prediction | 790 | 822 | - | - | |
Cre11g1622 | 875 | Pfam | haloacid dehalogenase-like hydrolase | 398 | 619 | - | - | |
Cre11g1622 | 875 | Pfam | E1-E2 ATPase | 213 | 380 | - | - | |
Cre11g1622 | 875 | NCBIfam | heavy metal translocating P-type ATPase | 153 | 708 | IPR027256 | GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro) | |
Cre11g1622 | 875 | ProSiteProfiles | Heavy-metal-associated domain profile. | 20 | 86 | IPR006121 | GO:0046872(InterPro) | |
Cre11g1622 | 875 | FunFam | Putative cadmium/zinc-transporting ATPase 3 | 16 | 89 | - | - | |
Cre11g1622 | 875 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 404 | 410 | IPR018303 | - | |
Cre11g1622 | 875 | Gene3D | - | 16 | 88 | - | - | |
Cre11g1622 | 875 | Gene3D | - | 190 | 305 | - | - | |
Cre11g1622 | 875 | MobiDBLite | consensus disorder prediction | 790 | 848 | - | - | |
Cre11g1622 | 875 | SFLD | p-type atpase | 384 | 657 | IPR044492 | - | |
Cre11g1622 | 875 | SUPERFAMILY | Calcium ATPase, transduction domain A | 216 | 301 | IPR008250 | - | |
Cre11g1622 | 875 | SUPERFAMILY | HMA, heavy metal-associated domain | 16 | 85 | IPR036163 | GO:0046872(InterPro) | |
Cre11g1622 | 875 | PRINTS | P-type cation-transporting ATPase superfamily signature | 251 | 265 | - | - | |
Cre11g1622 | 875 | PRINTS | P-type cation-transporting ATPase superfamily signature | 550 | 560 | - | - | |
Cre11g1622 | 875 | PRINTS | P-type cation-transporting ATPase superfamily signature | 402 | 416 | - | - | |
Cre11g1622 | 875 | PRINTS | P-type cation-transporting ATPase superfamily signature | 629 | 641 | - | - | |
Cre11g1622 | 875 | PRINTS | P-type cation-transporting ATPase superfamily signature | 605 | 624 | - | - | |
Cre11g1622 | 875 | SFLD | Haloacid Dehalogenase | 384 | 657 | - | - | |
Cre11g1622 | 875 | NCBIfam | HAD-IC family P-type ATPase | 176 | 682 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Cre11g1622 | 875 | NCBIfam | cadmium family heavy metal-translocating P-type ATPase | 153 | 492 | - | - | |
Cre11g1622 | 875 | PRINTS | Copper-transporting ATPase signature | 640 | 654 | - | - | |
Cre11g1622 | 875 | PRINTS | Copper-transporting ATPase signature | 193 | 211 | - | - | |
Cre11g1622 | 875 | PRINTS | Copper-transporting ATPase signature | 582 | 599 | - | - | |
Cre11g1622 | 875 | SUPERFAMILY | HAD-like | 401 | 706 | IPR036412 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g1545 | Cre-Chr2:27832144 | Cre11g1622 | Cre-Chr11:27042233 | 1.10E-65 | dispersed | |
Cre10g1092 | Cre-Chr10:21557644 | Cre11g1622 | Cre-Chr11:27042233 | 1.30E-56 | dispersed | |
Cre11g1622 | Cre-Chr11:27042233 | Cre06g2228 | Cre-Chr6:30154281 | 1.40E-284 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre11g1622 | K01534 | - | csv:101203668 | 1410.2 |