Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g1679 TACAAAGGAGTTTTCCCTTTGGCCGATTTCCCTTCTCTTTCCTTCCCTCCGCCTTCGACAATCGACACCGTCATCTCCGTTCTTCAATTCTTCCTCCTCTCAATCTTCTCATCTTCCTCACCTCACCGTTTGCTGCTTTCTTCCCTCACCGTCGATCTCCCTCCACTCCGTCGATCACCCTCACGCCGTTTCTCTAATTCCACTCCATCGATCTCCCTCACGCCGCCTCTCTCATCCACTCTCTCGATTTCCACTGGCAGTGTGTCCAAACTCCCAAGGGCCTCAGGCTTAGCTATTCATCAGTGTAAGATGGATAGCCCTTTGACGCGGAGCTCTACCCCTAATTCCTCACCTATCTCAAATCCTGGTTCAAATGATGAAAGCCCACGTGTTAAATTCCTGTGCAGCTTCTTGGGAAGTATAATGCCTCGCCCCCAAGATGGCAAGCTTCGGTATGTTGGGGGAGAGACGAGGATTGTGAGTGTTCAGAGGGATATTACATATGAGGAGTTAATGATTAAGATGAGGGAACTTTATGATGGGGCTGCAGTGTTGAAGTACCAGCAACCAGATGAGGATCCTGATGCTCTTGTGTCTGTTGTCAATGATGATGATGTGATTAACATGATGGAAGAGTATGATAAGGTGGGTTCTGGTGACGGGTTCACTAGGCTGAGGATATTCTTGTTTTCACATCCTGAACAAGATGGTTCTTTGCCCTTTGTGGATGGTGATGAGAGGGATACTGAAAGGCGATATGTAGATGCTCTTAATAATTCGAATGACATGAATGATTTTGTTAGACAACAACAGCTAAATTCCCCTGCAATTAGTGGCATAGATGATATGCACGGGAATGAACATTTTTTGAACCCAATGAATATTGAAGGTAGTCTTCACACTCAGAGGAGTTGTGAGCCCTTGTCACAATATCATCTGCATCAGCTCACAATCCCCCATGTTGGGTCTGGGGGGCAACAACAATCTGTGGCCCAAAGGTATAGTGAAATGGAAGCTCCATGGAGTCCTGCTTTCCTTTCACCCAGGCATCATGGTCCATATGATTCAAGAACGATGGGTGAATATCCATCTTCTCCATTTGCACGATACCGTATGGCATTCCCAGATTTGCCAGATAAATATTTGGAAAGAATGCCTGAAGACTATGTTAGGCAGCAAATGAATCACCAACATATGTATGAACATCAACCACAATATAACGAGAATATTGTATGGCTGCCAAATGGAACAACTAGTGAAGAGTCAGGTTTCCCAGGTAATATATTACATGGACATGGTGTTCTAGATGGGAATAGTTCTTGTGAACACTGTCGGGCAAATTTTCATCGGTATCAAACACACATGGAACAAGCTAATACGATAAATGGACTTCCCCCTGAATACCCTCAGAATAGAGAGGCCTTGATGCAGAAGGCAGACACGAAGTTCCATCATGGTATTTTTCCAAATGAGCAGAATATTAATGATCATCGATCTACTTATAATGAGACACCACCCCATGAGAAAGGATGGATTATGCAACACCAGGTGAGTGTGCGAGGGGATGACACGAGAACACATGTTTCTGGGGCTGGACGATTGAATGATCACTACATTGTGGATGGTTCTGGCTCAAATTTTCCTCCTACACAAAGTAATATAACTGATGGCTACCATGCTTCCACAAATTTTCATGATGAGGGATTTCGTGATCAGGTTGTGCCTAGTGGGCAACATATGTGCGTTCCTCCTCCAGAAGATCGTGGTGTTGGTTATATGCCTTATGGATATGGAGGAGATCCTCATTATCCTCCAATGGCACAAAGGCATATGCCTGGAAATGCCTCTTGGCGAAATGTTCAGAATCCATTACATGTTGCTCCCACTTATGAAGCATCTGTTTTCCTTCAACAAGGGAATGCGAGCATAAATCCAGGATATATCAAAGCCATGCAGGATGGTAGTCCACGAATTCATATCGGTATGGACCACCAAAATCCTTGGCATGAATCCTCACAAAAAATTTTGGGTATTGAGGGTGCAACTGGTTCAGAGCATTTACCTGGACATGTTTTGAAGACTAACTCGACCGCGGTTGGCCATGACAATCAACACTTAACAAGTTTAGAACATATCCAACCACATCTAGATAAGATAAACCTTGTTGCTTCTCCTATGCAGAGGTCAGATTCATCTTCACCATTTATTCATGAAAAAAAAATGGTTGCACCTTTTCATCCTAGCCAAAATTCGCAACCGAGGGCTGTTAGTGTGGTTAATGAAGCTATGATGATGGAAAGAAAAGTTGTGCATGGGGAAGGAAATGGACACATGATTAACGATACGGGGAAAGTTGACATCTCTGAAGCACACATTGTTTCTCATCCCGGGCAAAATAACACTGATGATACATATTCCAAGGTTGCACCCCTTGAATCGTTAAATTCAACTTGCATGAACTCTGCAGTAGAAAATGGTGATGGCCTGAAACCTTCTGCAGAGACTCTTGAAAATCCTAAACTATCAGTCAGCCGTCTGAGTTTCTTACCTGAGTTGATTGCATCTGTGAAAAGAGCAGCACTAGAAGTATCTGAAGAGGCAATGGTTGAAGAAACCGCTCAAAGGGGTCCTGATTCAATAGGAAAAACAGAGACAACAAATGAGCAACATTCCTCGAATGCCCATGGGGAACCTGAGTTGGAAACTGAGAGTGACAATCAAAGCTCTGAAATTGAGCCAACAAAAGCTGAAGAGGAAGCCATTTCAAGAGGATTACAAACAATTAAAAATGATGATCTGGAGGAGATTCGTGAACTAGGGTCTGGGACTTATGGTGCTGTTTATCATGGGAAATGGAGAGGTTCTGATGTTGCAATAAAGAGGATCAAAGCTAGCTGTTTTGCTGGACGGCCTTCGGAAAGGGAACGTTTGATTGCAGATTTTTGGAAGGAAGCTTTGATATTAAGTTCTTTACACCATCCAAATGTTGTTTCCTTCTATGGTATTGTTCGTGATGGTCCTGATGGTTCCTTAGCAACAGTGACAGAATTCATGGTTAATGGATCATTGAAGCAGTTTTTGCACAAGAAGGACAGGACCATCGATCGTCGTAAGAGACTCATTATAGCTATGGATGCTGCATTTGGGATGGAATATTTGCATGGGAAGAATATTGTACATTTTGATTTGAAATGCGAAAACCTTTTAGTGAATATGAGAGACCCTCAGAGGCCTGTATGCAAGATTGGTGATTTGGGATTGTCAAAGGTGAGACAACACACGTTAGTGTCAGGAGGGGTTCGTGGAACTTTGCCCTGGATGGCACCGGAGCTTCTTAGTGGGAAAAGTAACATGGTGACAGAGAAGATCGATGTTTACTCATTTGGGATTGTTATGTGGGAACTACTCACAGGAGATGAACCATATTCAGATATGCATTGTGCTTCTATAATTGGAGGAATTGTGAACAATTGTTTACGCCCTGAAATTCCGACATGGTGCGATCCAGAATGGAAGGCTTTAATGTCAAGCTGTTGGGACTCGGACCCAGCTAAGAGACCATCATTTTCAGAAATTTCTCAGAAGCTAAGGAATATGGCAGCTGCAATGAATAGACTGCATTGCTGGGAGACTACAAGTACAGATATGAAGGAGATCCATGTAGGCAATGGGAATGATTTCACTTGGGATTCTGCCGTTGGAAGCGTACGCCATACAGTAATGATACAATACATATATATGTTGGTTCTGCTATAA 3756 43.24 YKGVFPLADFPSLSFPPPSTIDTVISVLQFFLLSIFSSSSPHRLLLSSLTVDLPPLRRSPSRRFSNSTPSISLTPPLSSTLSISTGSVSKLPRASGLAIHQCKMDSPLTRSSTPNSSPISNPGSNDESPRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSVQRDITYEELMIKMRELYDGAAVLKYQQPDEDPDALVSVVNDDDVINMMEEYDKVGSGDGFTRLRIFLFSHPEQDGSLPFVDGDERDTERRYVDALNNSNDMNDFVRQQQLNSPAISGIDDMHGNEHFLNPMNIEGSLHTQRSCEPLSQYHLHQLTIPHVGSGGQQQSVAQRYSEMEAPWSPAFLSPRHHGPYDSRTMGEYPSSPFARYRMAFPDLPDKYLERMPEDYVRQQMNHQHMYEHQPQYNENIVWLPNGTTSEESGFPGNILHGHGVLDGNSSCEHCRANFHRYQTHMEQANTINGLPPEYPQNREALMQKADTKFHHGIFPNEQNINDHRSTYNETPPHEKGWIMQHQVSVRGDDTRTHVSGAGRLNDHYIVDGSGSNFPPTQSNITDGYHASTNFHDEGFRDQVVPSGQHMCVPPPEDRGVGYMPYGYGGDPHYPPMAQRHMPGNASWRNVQNPLHVAPTYEASVFLQQGNASINPGYIKAMQDGSPRIHIGMDHQNPWHESSQKILGIEGATGSEHLPGHVLKTNSTAVGHDNQHLTSLEHIQPHLDKINLVASPMQRSDSSSPFIHEKKMVAPFHPSQNSQPRAVSVVNEAMMMERKVVHGEGNGHMINDTGKVDISEAHIVSHPGQNNTDDTYSKVAPLESLNSTCMNSAVENGDGLKPSAETLENPKLSVSRLSFLPELIASVKRAALEVSEEAMVEETAQRGPDSIGKTETTNEQHSSNAHGEPELETESDNQSSEIEPTKAEEEAISRGLQTIKNDDLEEIRELGSGTYGAVYHGKWRGSDVAIKRIKASCFAGRPSERERLIADFWKEALILSSLHHPNVVSFYGIVRDGPDGSLATVTEFMVNGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVRQHTLVSGGVRGTLPWMAPELLSGKSNMVTEKIDVYSFGIVMWELLTGDEPYSDMHCASIIGGIVNNCLRPEIPTWCDPEWKALMSSCWDSDPAKRPSFSEISQKLRNMAAAMNRLHCWETTSTDMKEIHVGNGNDFTWDSAVGSVRHTVMIQYIYMLVLL 1251
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 28162684 28174716 - CrPI670011_11g016790.1 Cre11g1679 513424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g1679 1251 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 150 232 - -
Cre11g1679 1251 Gene3D Transferase(Phosphotransferase) domain 1 1020 1232 - -
Cre11g1679 1251 MobiDBLite consensus disorder prediction 865 927 - -
Cre11g1679 1251 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1058 1070 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g1679 1251 PRINTS Tyrosine kinase catalytic domain signature 1015 1028 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g1679 1251 PRINTS Tyrosine kinase catalytic domain signature 1167 1189 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g1679 1251 PRINTS Tyrosine kinase catalytic domain signature 1123 1145 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g1679 1251 PRINTS Tyrosine kinase catalytic domain signature 1052 1070 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g1679 1251 Pfam Protein tyrosine and serine/threonine kinase 935 1196 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g1679 1251 Gene3D - 149 232 - -
Cre11g1679 1251 SMART serkin_6 933 1202 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g1679 1251 SUPERFAMILY CAD & PB1 domains 147 235 - -
Cre11g1679 1251 MobiDBLite consensus disorder prediction 105 127 - -
Cre11g1679 1251 CDD PB1_UP2 134 230 - -
Cre11g1679 1251 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 926 1020 - -
Cre11g1679 1251 ProSitePatterns Protein kinases ATP-binding region signature. 939 960 IPR017441 GO:0005524(InterPro)
Cre11g1679 1251 ProSiteProfiles Protein kinase domain profile. 933 1210 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g1679 1251 SUPERFAMILY Protein kinase-like (PK-like) 920 1194 IPR011009 -
Cre11g1679 1251 CDD STKc_MAP3K-like 939 1196 - -
Cre11g1679 1251 MobiDBLite consensus disorder prediction 878 893 - -
Cre11g1679 1251 Gene3D Phosphorylase Kinase; domain 1 919 1019 - -
Cre11g1679 1251 MobiDBLite consensus disorder prediction 57 80 - -
Cre11g1679 1251 MobiDBLite consensus disorder prediction 894 927 - -
Cre11g1679 1251 PANTHER SERINE-THREONINE PROTEIN KINASE 108 1200 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cre11g1679 1251 MobiDBLite consensus disorder prediction 60 80 - -
Cre11g1679 1251 Pfam PB1 domain 146 230 IPR000270 GO:0005515(InterPro)
Cre11g1679 1251 SMART PB1_new 145 230 IPR000270 GO:0005515(InterPro)
Cre11g1679 1251 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1021 1212 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g0444 Cre-Chr5:4026740 Cre11g1679 Cre-Chr11:28162684 6.90E-143 dispersed
Cre06g2072 Cre-Chr6:28489803 Cre11g1679 Cre-Chr11:28162684 3.30E-142 dispersed
Cre10g0897 Cre-Chr10:10344169 Cre11g1679 Cre-Chr11:28162684 8.90E-30 dispersed
Cre11g1679 Cre-Chr11:28162684 Cre11g1883 Cre-Chr11:30496870 1.50E-47 dispersed
Cre11g1679 Cre-Chr11:28162684 Cre03g0716 Cre-Chr3:6040361 3.10E-141 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64559 PF07714 PK_Tyr_Ser-Thr 1.20E-61 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g1679 - - - 0.0