Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g1745 ATGGGAAAGCTTAGCTTGAACTGCTGTAATAGCTTCCTTGAGAATTCAAAACCTTATTTTGCCATGATATCCTTACAATTTGGATATGCTGGCATGAACATCATCTCTAAAGTCTCTCTTAGTAGAGGGATGAGTCATTACGTCCTCGTCGTTTATCGACATGCTTTCGCTACTGCTTCCATTGCTCCCTTCGTTCTCTTCTTCGAACGGAGAGGACAGCCAAGGATAACACTCAAAGTTTTCATTCAAATATTTGTGTTGGCTTTGCTTGGCCCGGTTATCGATCAAAATTTCTACTATGCTGGGCTAAAATATACTTCACCAACTTTCTCTTGTGCCATGAGCAACATGCTGCCTGCAATGACATTTGTGATGGCTGTGATCTTTAGGATGGAAAAATTGGAGATGAAGAAATTGAGATGCCAAGCAAAAGTTTTGGGAACTTTAGTGTCAGTGGCTGGAGCAATGGTGATGACTTTATACAAAGGTCCACTTCTTCAAATGGCTTGGTCTAAAAATTCCCATATCACCAATTCTAATGAAACTTCCAACAACAAAGATTGGTTCAAAGGCTCCATTTTCCTCATCATTGCCACTCTTGCTTGGGCTTCTCTCTTTGTTTTGCAGAATGAGGCATTGAAGACATACAAGAACCATCAACTCACTCTCACCACACTCGTGTGTTTTCTTGGGACTTTGCAAGCCATAGCTGTGACTTTAGTAGCCGAGCACAAAGCTTCGGTTTGGACAATTGGTTGGGACATGAATCTTCTTGCTGCTGCCTATGCTGGAATTGTGACATCAAGTATTTCATACTATGTACAAGGGTTGGTGATGAAAAAGAGAGGACCTGTATTTACAACTGCATTTAGTCCTTTGATTATGATACTTGTGGCCATCATGGGCTCTCTCATCCTTGCTGAAAAGATTTTTCTTGGAGGAATAATAGGATCCATCTTGATAGTGTTTGGGCTATATTCAGTACTTTGGGGAAAGCACAAAGAGAATTTGGAGATGATTAAAACTGCTGCTGTTGATGATGAAATACCAAAAGCAATTAAAGCTTCTTCTCAACCAAATATTAATAATAATAATAATAATAATAATAATAATATTGCAAATAATGTTGAAGCTAATGAGATTGTGACCATGGCACCCAATAAGCTAAGTTCCAATAATAATTCAATTTTCATTTCCATGCCTGCCCTTGAAAACCCCATTAAACCCAACCAAATCCCAAGAGAATAA 1248 38.86 MGKLSLNCCNSFLENSKPYFAMISLQFGYAGMNIISKVSLSRGMSHYVLVVYRHAFATASIAPFVLFFERRGQPRITLKVFIQIFVLALLGPVIDQNFYYAGLKYTSPTFSCAMSNMLPAMTFVMAVIFRMEKLEMKKLRCQAKVLGTLVSVAGAMVMTLYKGPLLQMAWSKNSHITNSNETSNNKDWFKGSIFLIIATLAWASLFVLQNEALKTYKNHQLTLTTLVCFLGTLQAIAVTLVAEHKASVWTIGWDMNLLAAAYAGIVTSSISYYVQGLVMKKRGPVFTTAFSPLIMILVAIMGSLILAEKIFLGGIIGSILIVFGLYSVLWGKHKENLEMIKTAAVDDEIPKAIKASSQPNINNNNNNNNNNIANNVEANEIVTMAPNKLSSNNNSIFISMPALENPIKPNQIPRE 415
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 29068755 29072788 - CrPI670011_11g017450.1 Cre11g1745 513490
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre11g1745 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Cre11g1745 415 Pfam EamA-like transporter family 19 159 IPR000620 GO:0016020(InterPro)
Cre11g1745 415 Pfam EamA-like transporter family 190 329 IPR000620 GO:0016020(InterPro)
Cre11g1745 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 334 - -
Cre11g1745 415 PANTHER WAT1-RELATED PROTEIN 20 352 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre06g1446 Cre-Chr6:8823185 Cre11g1745 Cre-Chr11:29068755 7.70E-69 dispersed
Cre06g2320 Cre-Chr6:31148932 Cre11g1745 Cre-Chr11:29068755 1.10E-60 dispersed
Cre08g0648 Cre-Chr8:19422400 Cre11g1745 Cre-Chr11:29068755 1.90E-59 dispersed
Cre09g2376 Cre-Chr9:43102513 Cre11g1745 Cre-Chr11:29068755 1.70E-60 dispersed
Cre10g1584 Cre-Chr10:29891533 Cre11g1745 Cre-Chr11:29068755 3.50E-37 dispersed
Cre10g1586 Cre-Chr10:29908025 Cre11g1745 Cre-Chr11:29068755 4.30E-43 dispersed
Cre10g1761 Cre-Chr10:32009258 Cre11g1745 Cre-Chr11:29068755 3.50E-16 dispersed
Cre10g1762 Cre-Chr10:32014096 Cre11g1745 Cre-Chr11:29068755 2.20E-125 dispersed
Cre11g1745 Cre-Chr11:29068755 Cre11g1981 Cre-Chr11:31568705 1.40E-93 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g1745 - - - 0.0