Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g1797 ATGAAGCTTCTTATTCTGGCCACCCTCACCATCTCACTCCTCTTCCCTTTCAGCCTCCTCAATTTCCTCATCTTTTGCTCTCTCCTCGTCCTCTCTCTCAACTTCTGGCTCATCCCCGGTGGATTTGCGTGGCGTAACCACCACCGCTTTTCCGTCAACCTCCCTGGCCCCTCCGGTTGGCCGCTCCTTGGCACGCTCCCCCAAATGGGGGCGCTTGCTCACCAGAATCTTGCCGCCATTGCTCACTCCTTCAAAGCCACACGCCTTATGTCCTTTAGCTTGGGTGCCACTCGAGCCATCATAAGCAGCCACCCTGACACGGCCAAGCAGATTCTCTGCGGGTCTGCTTTCTCCGACCGTCCGGTCAAGCAATCAGCTCGGCTCATGATGTTCGAGAGAGCCATTGGCTTTGCTCCAAATGGGGACTATTGGCGCAATCTTCGACGAATTGCCGCGAACCACATGTTTTCCCCACGGAGAATCTCCGATTTGGAGGGGCTCCGTAGGGAGGTGGCGGATGAAATGGTGGCAGCGGTGTCAGAAAATATGGCGGTGGATGGGGTGGTGAGGCTGAGAGAGGTGCTGCAGAAGCATTCTTTGAAGAACATAATAGAGAGTGTGTTTGGGAGTGGTTTGGAGATGGGGAGGAAGGAAGAGCTGAGTGATATGGTGAGAGAAGGATATGAATTGATAGCGATGTTCAATTGGGAAGATTATTTTCCAGTCAGCTTTTTGGATTTTGGTGGAGTGAAACGGAGGTGCAACGAATTGGCGGGCAGGGTTAATGTGGTAATTGGCCAGATTGTTGAAGAGAGAAAAAGAGAAAATAATGAGTTTAATAATGATTTTCTTACTACTTTGCTAACTTTGCCAAAGGAGGATCAGTTGAGTGATTCAGATACGGTGGCTGTTTTGTGGGAAATGATATTTCGTGGAACCGACACTATAGCAATACTTCTAGAATGGATAATGGCCAGGATGATATTACACCCAGATATCCAAGCCAAAGCTCAAAAGGAGATTGACACGTGCGTAGGGTGTAATAGGCACGTGCGTGATTCCGACATTCCGAACCTTCCTTACCTCCAGGCAATAGTTAAAGAAGTGCTTCGTCTACACCCACCAGGGCCATTACTTTCGTGGGCCCGTTTGGCAATCCACGATGTCCACGTGGACAAGATCTTAATCCCAGCTGGCACAACGGCAATGGTCAACATGTGGGCCATAGCCCACGACCCTTCCATATGGAAAGACCCATGGACATTTAAGCCGGAACGGTTCATTGAAAACGACATGTCGATTATGGGATCGGACTTGAGATTGGCGCCGTTCGGAGCTGGGCGAAGGGCGTGCCCAGGAAGGGCCTTGGGTTTAGCCACTGTGCACCTATGGCTAGCCACTTTTCTGCAACGGTTCAGATGGGTTCCATGTTCTACAAAGTCGGTTAATTTATCGGAGTGTTTGAAGCTATCCCTTGAAATGAAGAAGCCTCTGAATTGTCGTGTGGTTAGTCGATGA 1518 50.07 MKLLILATLTISLLFPFSLLNFLIFCSLLVLSLNFWLIPGGFAWRNHHRFSVNLPGPSGWPLLGTLPQMGALAHQNLAAIAHSFKATRLMSFSLGATRAIISSHPDTAKQILCGSAFSDRPVKQSARLMMFERAIGFAPNGDYWRNLRRIAANHMFSPRRISDLEGLRREVADEMVAAVSENMAVDGVVRLREVLQKHSLKNIIESVFGSGLEMGRKEELSDMVREGYELIAMFNWEDYFPVSFLDFGGVKRRCNELAGRVNVVIGQIVEERKRENNEFNNDFLTTLLTLPKEDQLSDSDTVAVLWEMIFRGTDTIAILLEWIMARMILHPDIQAKAQKEIDTCVGCNRHVRDSDIPNLPYLQAIVKEVLRLHPPGPLLSWARLAIHDVHVDKILIPAGTTAMVNMWAIAHDPSIWKDPWTFKPERFIENDMSIMGSDLRLAPFGAGRRACPGRALGLATVHLWLATFLQRFRWVPCSTKSVNLSECLKLSLEMKKPLNCRVVSR 505
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 29547594 29550180 - CrPI670011_11g017970.1 Cre11g1797 513542
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre11g1797 505 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g1797 505 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g1797 505 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g1797 505 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g1797 505 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g1797 505 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g1797 505 SUPERFAMILY Cytochrome P450 55 505 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g1797 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre11g1797 505 Gene3D Cytochrome P450 44 503 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g1797 505 Pfam Cytochrome P450 55 491 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g1797 505 FunFam Cytochrome P450 78A5 46 505 - -
Cre11g1797 505 PANTHER CYTOCHROME P450 78A7-RELATED 16 502 IPR051996 -
Cre11g1797 505 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g1797 505 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g1797 505 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g1797 505 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g1502 Cre-Chr1:28262655 Cre11g1797 Cre-Chr11:29547594 9.70E-153 dispersed
Cre06g1047 Cre-Chr6:4258136 Cre11g1797 Cre-Chr11:29547594 2.00E-129 dispersed
Cre11g1797 Cre-Chr11:29547594 Cre03g0622 Cre-Chr3:5153445 2.20E-61 dispersed
Cre11g1797 Cre-Chr11:29547594 Cre08g0987 Cre-Chr8:22976887 4.60E-160 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g1797 - - - 0.0