Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g1800 ATGGCCGACGATTCCCCCAAGAAGAACATCCTTCAGAGCACCGCTCTTCTCCAGTATATACTGGAAGCCAACGCCTATCCAAGAGAGCATGAACAGTTGAAGGAACTCAGGGAATCCACCTTCGAGAAATTCGACAAGTCCATGAGTTTGATGAATGTACCAGCGGATGAAGGATTGTTTCTATCAATGCTTTTGAAATTGATGAACGCAAAGAAAACGATAGAGATCGGTGTCTTCACTGGCTATTCGCTCCTCACCACTGCGCTTGCACTGCCCGCCGATGGCCAGATAACCGCAATTGATGTGAATAGACAATCGTTCGAATTTGGTTTGCCATTTATCAAAAAAGCCGGAGTTGATCATAAGATCAATTTTGTGGAATCTCAGGCATTGGTTGCCTTGAATGACCTCCTCAATGATGGCAAAGAAGAAGATTTTGATTTTGCATTTGTTGATGCCAAAAAATCGGAGTATATTAAATATCATGAGTTGCTTCTAAAACTAGTGAAGGTAGGTGGAGTAATTGTCTATGATAACACTCTATGGTTCGGATCAGTGGCACTAAGCGATGACGTCGTCCATGAAAAATTGAAGGAGAACAAAAGTCATATACAACAATTCAATGCTTTTCTAGTAAATGACATGCGGGTGGAGATAGCTCTCCTCACCATTGGAGATGGTGTCACTCTTTGTAGGCGTATCAAATAA 708 42.09 MADDSPKKNILQSTALLQYILEANAYPREHEQLKELRESTFEKFDKSMSLMNVPADEGLFLSMLLKLMNAKKTIEIGVFTGYSLLTTALALPADGQITAIDVNRQSFEFGLPFIKKAGVDHKINFVESQALVALNDLLNDGKEEDFDFAFVDAKKSEYIKYHELLLKLVKVGGVIVYDNTLWFGSVALSDDVVHEKLKENKSHIQQFNAFLVNDMRVEIALLTIGDGVTLCRRIK 235
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 29583350 29588091 - CrPI670011_11g018000.1 Cre11g1800 513545
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre11g1800 235 CDD AdoMet_MTases 74 177 - -
Cre11g1800 235 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 9 234 IPR002935 GO:0008171(InterPro)
Cre11g1800 235 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 16 233 IPR029063 -
Cre11g1800 235 PANTHER O-METHYLTRANSFERASE-RELATED 7 234 IPR050362 GO:0008757(PANTHER)
Cre11g1800 235 Gene3D Vaccinia Virus protein VP39 1 235 IPR029063 -
Cre11g1800 235 Pfam O-methyltransferase 25 234 IPR002935 GO:0008171(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1421 Cre-Chr7:29227028 Cre11g1800 Cre-Chr11:29583350 9.60E-37 dispersed
Cre11g1800 Cre-Chr11:29583350 Cre11g1802 Cre-Chr11:29603335 6.70E-114 dispersed
Cre11g1799 Cre-Chr11:29574989 Cre11g1800 Cre-Chr11:29583350 4.30E-121 tandem
Cre11g1800 Cre-Chr11:29583350 Cre11g1801 Cre-Chr11:29592594 7.70E-110 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g1800 K00588 - csv:101212121 380.178