Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre11g1800 | ATGGCCGACGATTCCCCCAAGAAGAACATCCTTCAGAGCACCGCTCTTCTCCAGTATATACTGGAAGCCAACGCCTATCCAAGAGAGCATGAACAGTTGAAGGAACTCAGGGAATCCACCTTCGAGAAATTCGACAAGTCCATGAGTTTGATGAATGTACCAGCGGATGAAGGATTGTTTCTATCAATGCTTTTGAAATTGATGAACGCAAAGAAAACGATAGAGATCGGTGTCTTCACTGGCTATTCGCTCCTCACCACTGCGCTTGCACTGCCCGCCGATGGCCAGATAACCGCAATTGATGTGAATAGACAATCGTTCGAATTTGGTTTGCCATTTATCAAAAAAGCCGGAGTTGATCATAAGATCAATTTTGTGGAATCTCAGGCATTGGTTGCCTTGAATGACCTCCTCAATGATGGCAAAGAAGAAGATTTTGATTTTGCATTTGTTGATGCCAAAAAATCGGAGTATATTAAATATCATGAGTTGCTTCTAAAACTAGTGAAGGTAGGTGGAGTAATTGTCTATGATAACACTCTATGGTTCGGATCAGTGGCACTAAGCGATGACGTCGTCCATGAAAAATTGAAGGAGAACAAAAGTCATATACAACAATTCAATGCTTTTCTAGTAAATGACATGCGGGTGGAGATAGCTCTCCTCACCATTGGAGATGGTGTCACTCTTTGTAGGCGTATCAAATAA | 708 | 42.09 | MADDSPKKNILQSTALLQYILEANAYPREHEQLKELRESTFEKFDKSMSLMNVPADEGLFLSMLLKLMNAKKTIEIGVFTGYSLLTTALALPADGQITAIDVNRQSFEFGLPFIKKAGVDHKINFVESQALVALNDLLNDGKEEDFDFAFVDAKKSEYIKYHELLLKLVKVGGVIVYDNTLWFGSVALSDDVVHEKLKENKSHIQQFNAFLVNDMRVEIALLTIGDGVTLCRRIK | 235 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 29583350 | 29588091 | - | CrPI670011_11g018000.1 | Cre11g1800 | 513545 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre11g1800 | 235 | CDD | AdoMet_MTases | 74 | 177 | - | - | |
| Cre11g1800 | 235 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 9 | 234 | IPR002935 | GO:0008171(InterPro) | |
| Cre11g1800 | 235 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 16 | 233 | IPR029063 | - | |
| Cre11g1800 | 235 | PANTHER | O-METHYLTRANSFERASE-RELATED | 7 | 234 | IPR050362 | GO:0008757(PANTHER) | |
| Cre11g1800 | 235 | Gene3D | Vaccinia Virus protein VP39 | 1 | 235 | IPR029063 | - | |
| Cre11g1800 | 235 | Pfam | O-methyltransferase | 25 | 234 | IPR002935 | GO:0008171(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre07g1421 | Cre-Chr7:29227028 | Cre11g1800 | Cre-Chr11:29583350 | 9.60E-37 | dispersed | |
| Cre11g1800 | Cre-Chr11:29583350 | Cre11g1802 | Cre-Chr11:29603335 | 6.70E-114 | dispersed | |
| Cre11g1799 | Cre-Chr11:29574989 | Cre11g1800 | Cre-Chr11:29583350 | 4.30E-121 | tandem | |
| Cre11g1800 | Cre-Chr11:29583350 | Cre11g1801 | Cre-Chr11:29592594 | 7.70E-110 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre11g1800 | K00588 | - | csv:101212121 | 380.178 |