Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre11g1801 | ATGAAAATCGGTGATAAGAAATCCCAAAAACGCTCACACTTATTGCAAGCATCAGAGCTCGTTATTCTGTTCATTACAGTGAAGGTCATGGCGGACCATCAGCACGAGAAGAACATCCTCCGGAGCACCGCTCTTCTCCAGTATATATTGGAAGCCAATTCCTATCCGAGAGAGCATGAACAGTTGAAGGAACTCAGAGAAGCCACCTTCGAGAAGTTTGACAAACACCTGAGTGTGATGAATGTACCGGCGGACGAAGGATTATTTCTATCAATGCTTTTGAAATTGATGAACGCCAAGAAAACGATAGAGATCGGTGTATTCACTGGCTATTCCCTCCTCACTACGGCGCTTGCACTGCCCGCCGATGGCCAGATAACAGCAATTGATGTTGATAGAGAATCATTCGAGTTTGGTTTGCCATTTATAAGAAAGGCGGGAGTTGATCATAAGATCAATTTTGTAGAATGCCAAGCATTGGTTGTCCTCAATGACCTCCTCAACGAGGGCAAAGAAGGAGAGTATGACTTTGCATTTGTGGATGCAAACAAAGCGGAGTATATTAAATATCATGAGTTACTCTTAAAATTGGTGAAGGTAGGTGGAATAATTGCTTATGACAACACCCTGTGGTTTGGATCGGTCGCATTGAGCGACGACGTTGTCCTTGAAAATTTGAAGGAGGGTAGAAGTCGTACACGAGAACTCAATGCTTTTCTAATTAACGACTCACGGGTAGAGATAGCTCTCCTCTCCGTTGGAGATGGCTTCACTCTCTGCCGGCGTATCAAATAG | 795 | 44.15 | MKIGDKKSQKRSHLLQASELVILFITVKVMADHQHEKNILRSTALLQYILEANSYPREHEQLKELREATFEKFDKHLSVMNVPADEGLFLSMLLKLMNAKKTIEIGVFTGYSLLTTALALPADGQITAIDVDRESFEFGLPFIRKAGVDHKINFVECQALVVLNDLLNEGKEGEYDFAFVDANKAEYIKYHELLLKLVKVGGIIAYDNTLWFGSVALSDDVVLENLKEGRSRTRELNAFLINDSRVEIALLSVGDGFTLCRRIK | 264 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 29592594 | 29597519 | - | CrPI670011_11g018010.1 | Cre11g1801 | 513546 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre11g1801 | 264 | Pfam | O-methyltransferase | 55 | 263 | IPR002935 | GO:0008171(InterPro) | |
| Cre11g1801 | 264 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 44 | 262 | IPR029063 | - | |
| Cre11g1801 | 264 | Gene3D | Vaccinia Virus protein VP39 | 27 | 264 | IPR029063 | - | |
| Cre11g1801 | 264 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 38 | 263 | IPR002935 | GO:0008171(InterPro) | |
| Cre11g1801 | 264 | CDD | AdoMet_MTases | 103 | 206 | - | - | |
| Cre11g1801 | 264 | PANTHER | O-METHYLTRANSFERASE-RELATED | 35 | 263 | IPR050362 | GO:0008757(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre11g1800 | Cre-Chr11:29583350 | Cre11g1801 | Cre-Chr11:29592594 | 7.70E-110 | tandem | |
| Cre11g1801 | Cre-Chr11:29592594 | Cre11g1802 | Cre-Chr11:29603335 | 7.60E-106 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre11g1801 | K00588 | - | csv:101212121 | 370.548 |