Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre11g1802 | ATGGCGGACAATTCCCCCTTGAAGAACATCCTTCAGAGCACCGCTCTTCTCCAGTATATACTCGAAGCCAACGCCTATCCGAGAGAGCACGAACAGTTGAAGGAACTCAGGGAATCAACCATCAAGAAATTTGACATCGCGAGTGTGATGAATGTACCGGTAGATGAAGGATTATTTCTATCAATGCTTTTGAAATTGATGAACGCAAAGAAAACGATAGAGATCGGTGTATTCACTGGCTATTCCCTCCTCACCACTGCGCTTGCACTGCCCTCCGATGGCCAGATAACAGCAATTGATGTTGATAGAGAATCATTCGAGTTTGGTTTGCCATTTATCAAAAAGGCGGGAGTTGATCATAAGATCAATTTTGTAGAATCTCAGGCATTGGTTGCCCTAAATGACCTCCTCAATGATGGTAAAGAAGAAGAGTTTGATTTTGCATTTGTTGATGCCAATAAATCAGAGTACATTAAATATCATGAGTTCCTTCTAAAACTGGTGAAGGTAGGTGGAGTAATTGCCTATGATAACACTCTATGGTTGGGATCAGTGGCGCTAAGTGATGACGCCGTCCATGAAGATTTGAAGGAGAACAAAACTTATTTGCAACGATTCAATGCTTTTCTAGTCAATGACACGCGGGTGGAGATAGTTCTCCTCTCCATTGGAGATGGTGTAACTCTTTGCAGGCGTATCAAATAA | 705 | 42.27 | MADNSPLKNILQSTALLQYILEANAYPREHEQLKELRESTIKKFDIASVMNVPVDEGLFLSMLLKLMNAKKTIEIGVFTGYSLLTTALALPSDGQITAIDVDRESFEFGLPFIKKAGVDHKINFVESQALVALNDLLNDGKEEEFDFAFVDANKSEYIKYHEFLLKLVKVGGVIAYDNTLWLGSVALSDDAVHEDLKENKTYLQRFNAFLVNDTRVEIVLLSIGDGVTLCRRIK | 234 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 29603335 | 29607671 | - | CrPI670011_11g018020.1 | Cre11g1802 | 513547 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre11g1802 | 234 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 16 | 232 | IPR029063 | - | |
Cre11g1802 | 234 | PANTHER | O-METHYLTRANSFERASE-RELATED | 8 | 233 | IPR050362 | GO:0008757(PANTHER) | |
Cre11g1802 | 234 | CDD | AdoMet_MTases | 73 | 176 | - | - | |
Cre11g1802 | 234 | Gene3D | Vaccinia Virus protein VP39 | 2 | 234 | IPR029063 | - | |
Cre11g1802 | 234 | Pfam | O-methyltransferase | 25 | 233 | IPR002935 | GO:0008171(InterPro) | |
Cre11g1802 | 234 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 9 | 233 | IPR002935 | GO:0008171(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g0953 | Cre-Chr2:6791640 | Cre11g1802 | Cre-Chr11:29603335 | 6.10E-65 | dispersed | |
Cre04g1319 | Cre-Chr4:31977521 | Cre11g1802 | Cre-Chr11:29603335 | 3.50E-31 | dispersed | |
Cre11g1799 | Cre-Chr11:29574989 | Cre11g1802 | Cre-Chr11:29603335 | 7.90E-115 | dispersed | |
Cre11g1800 | Cre-Chr11:29583350 | Cre11g1802 | Cre-Chr11:29603335 | 6.70E-114 | dispersed | |
Cre11g1801 | Cre-Chr11:29592594 | Cre11g1802 | Cre-Chr11:29603335 | 7.60E-106 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre11g1802 | K00588 | - | csv:101212121 | 374.4 |