Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g1802 ATGGCGGACAATTCCCCCTTGAAGAACATCCTTCAGAGCACCGCTCTTCTCCAGTATATACTCGAAGCCAACGCCTATCCGAGAGAGCACGAACAGTTGAAGGAACTCAGGGAATCAACCATCAAGAAATTTGACATCGCGAGTGTGATGAATGTACCGGTAGATGAAGGATTATTTCTATCAATGCTTTTGAAATTGATGAACGCAAAGAAAACGATAGAGATCGGTGTATTCACTGGCTATTCCCTCCTCACCACTGCGCTTGCACTGCCCTCCGATGGCCAGATAACAGCAATTGATGTTGATAGAGAATCATTCGAGTTTGGTTTGCCATTTATCAAAAAGGCGGGAGTTGATCATAAGATCAATTTTGTAGAATCTCAGGCATTGGTTGCCCTAAATGACCTCCTCAATGATGGTAAAGAAGAAGAGTTTGATTTTGCATTTGTTGATGCCAATAAATCAGAGTACATTAAATATCATGAGTTCCTTCTAAAACTGGTGAAGGTAGGTGGAGTAATTGCCTATGATAACACTCTATGGTTGGGATCAGTGGCGCTAAGTGATGACGCCGTCCATGAAGATTTGAAGGAGAACAAAACTTATTTGCAACGATTCAATGCTTTTCTAGTCAATGACACGCGGGTGGAGATAGTTCTCCTCTCCATTGGAGATGGTGTAACTCTTTGCAGGCGTATCAAATAA 705 42.27 MADNSPLKNILQSTALLQYILEANAYPREHEQLKELRESTIKKFDIASVMNVPVDEGLFLSMLLKLMNAKKTIEIGVFTGYSLLTTALALPSDGQITAIDVDRESFEFGLPFIKKAGVDHKINFVESQALVALNDLLNDGKEEEFDFAFVDANKSEYIKYHEFLLKLVKVGGVIAYDNTLWLGSVALSDDAVHEDLKENKTYLQRFNAFLVNDTRVEIVLLSIGDGVTLCRRIK 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 29603335 29607671 - CrPI670011_11g018020.1 Cre11g1802 513547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g1802 234 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 16 232 IPR029063 -
Cre11g1802 234 PANTHER O-METHYLTRANSFERASE-RELATED 8 233 IPR050362 GO:0008757(PANTHER)
Cre11g1802 234 CDD AdoMet_MTases 73 176 - -
Cre11g1802 234 Gene3D Vaccinia Virus protein VP39 2 234 IPR029063 -
Cre11g1802 234 Pfam O-methyltransferase 25 233 IPR002935 GO:0008171(InterPro)
Cre11g1802 234 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 9 233 IPR002935 GO:0008171(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0953 Cre-Chr2:6791640 Cre11g1802 Cre-Chr11:29603335 6.10E-65 dispersed
Cre04g1319 Cre-Chr4:31977521 Cre11g1802 Cre-Chr11:29603335 3.50E-31 dispersed
Cre11g1799 Cre-Chr11:29574989 Cre11g1802 Cre-Chr11:29603335 7.90E-115 dispersed
Cre11g1800 Cre-Chr11:29583350 Cre11g1802 Cre-Chr11:29603335 6.70E-114 dispersed
Cre11g1801 Cre-Chr11:29592594 Cre11g1802 Cre-Chr11:29603335 7.60E-106 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g1802 K00588 - csv:101212121 374.4