Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g1808 ATGGACAAAAATCTGTTGTTTCTAGTCTTGATTTTTCACTTTCAGGTTGCATTTAGGGTTTTAGCCCTCTCGCCGGATGGTCTCTCGCTTCTCTCTCTGAAGTCGGCGATTGACCAGTCGCCGGATTCCTCTGTTTTCTCCGATTGGAACGAGGATGACTCCACGCCTTGCCGATGGTCTGGCATTTCTTGCATGAACGTTTCCGGTGACTCGCGAGTCGTTGGAATTGCTCTCTCTGGTAAGAATCTCCATGGCTACATTCCTTCTGAACTCGGCTCGCTTGTCTATCTCCGGCGATTGAACCTCCATAACAATAATCTCTACGGCTCGATACCTGAACAGTTGTTTAATGCTACCTCATTACATAGCCTATTTCTCTACAGTAATAATCTCTCCGGTCCTTTTCCCCCTTCGATCTGCAACATTCCGAGGCTTCAAAACCTCGATCTCTCCAACAATTCTCTCGCCGGACCACTACCCGACGAATTGAAGAATTGTAAGCAATTGCAGCGATTAATACTCGCTAGAAATCAATTCGACGGAGAAATACCGTCTGGTGTTTGGTCTGGGATGGATAATTTACTTCAACTCGATCTCTCATCCAACGATTTCAGCGGATCGATTCCGGAGGATCTAGGGCAACTGAAGACACTTTCCGGTACGCTCAACCTCTCCTTCAATCATTTATCAGGTAAAATCCCGAAAACTCTCGGAGATTTGCCGGTAACGGTGAGTTTCGACCTCCGGAGCAACAATTTAAGCGGAAGCATACCTCAGACAGGTTCTTTCGCGAATCAAGGACCGACTGCATTTCTCAACAATCCCGAGTTATGTGGATTTCCTCTTCAAAAATCTTGTGAGAGTTCAGAACGTGGCTCACCGGGAAATCCGGATTCCAAGCCATCTTACATTTCCCCTAGAAAAGGATTGAGCGCCGGATTAATCATTCTCATCTCTGCCGCTGACGCCGCCGGAGTAGCATTTATCGGCTTGGTAATAGTATACATATATTGGCGACGGAAGGACAATTCGAACGGCTGTAGCTGTACGGCGAAAAGAAAATTCGGTGGGAATCAGAAAGACAATCTCTGCAATTTTCCTTGTATGAATGGACATGATAAGAATGAGGAGTCGGAAATGGAGGAACCGGAGAACAGTGAGAGAAGCAGAGAGGAAGGAGGGCTGGTGGCCGTAGACAAAGGCTTTACGTTCGAACTCGACGAGTTGCTGAGAGCGTCGGCGTATGTGCTGGGGAAGAGTGGACTGGGAATTGTGTACAAAGTGGTCCTCGGAAATGGGATTCCGGTGGCTGTACGGCGGTTGGGGGAAGGCGGAGAACAGAGGTATAAGGAGTTTGCGGCGGAGGTGCAGGCGATTGGAAGGGTAAAGCATCCTAATATTGTGAAACTGAGAGCTTATTATTGGGCGCCGGATGAGAAGCTTCTGATCAGTGATTTTATCTCCAATGGGAACTTGGCCTCTGCTCTTCGCGGGAAGAACGGGCAGGCATCTTCAATCCTTTCATGGGCAACAAGATTACGAGTAGCCAAGGGAACCGCCAGAGGATTAGCCTATCTACACGAATGCAGCCCAAGAAAATTCGTCCATGGCGACATCAAGCCCTCCAACATTCTCCTCGACAACGATTTCCATCCCCACATCTCCGACTTCGGCCTCAACCGCTTGATCAGCATCACCGGCAACAACCCCTCCTCCTCAGGCGGCCTCATCGGCGGCGCCTTCTCCTACCTCAAGTCCGTCCAAACCGATCGCACCAACAACTACTGCGCCCCGGAGGCCCGAGCCCCCGGCGGCCGGCCCACCCAAAAATGGGACGTTTATTCCTTCGGCGTCATGGTCCTCGAATTACTCACCGGAAAGTCGCCGGAGCTTTCCCCGAACACGTCGACTTCTTTGGAGATTCCGGATTTGGTGAGATGGGTTAGAAAAGGGTTTGAAGAAGCAAAGCCATTGTCGGAATTGGTGGACCCTGCTCTGTTACAAGAAGTACATGCCAAGAAAGAAGTGCTGGCCGTATTCCACTTGGCGCTCGCTTGTACAGAGAGCGACCCGGAAATTCGGCCCAGAATGAAGACGGTGTCGGAGAATTTCGAGAGGATTGGATCGTGA 2130 50.05 MDKNLLFLVLIFHFQVAFRVLALSPDGLSLLSLKSAIDQSPDSSVFSDWNEDDSTPCRWSGISCMNVSGDSRVVGIALSGKNLHGYIPSELGSLVYLRRLNLHNNNLYGSIPEQLFNATSLHSLFLYSNNLSGPFPPSICNIPRLQNLDLSNNSLAGPLPDELKNCKQLQRLILARNQFDGEIPSGVWSGMDNLLQLDLSSNDFSGSIPEDLGQLKTLSGTLNLSFNHLSGKIPKTLGDLPVTVSFDLRSNNLSGSIPQTGSFANQGPTAFLNNPELCGFPLQKSCESSERGSPGNPDSKPSYISPRKGLSAGLIILISAADAAGVAFIGLVIVYIYWRRKDNSNGCSCTAKRKFGGNQKDNLCNFPCMNGHDKNEESEMEEPENSERSREEGGLVAVDKGFTFELDELLRASAYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRYKEFAAEVQAIGRVKHPNIVKLRAYYWAPDEKLLISDFISNGNLASALRGKNGQASSILSWATRLRVAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFHPHISDFGLNRLISITGNNPSSSGGLIGGAFSYLKSVQTDRTNNYCAPEARAPGGRPTQKWDVYSFGVMVLELLTGKSPELSPNTSTSLEIPDLVRWVRKGFEEAKPLSELVDPALLQEVHAKKEVLAVFHLALACTESDPEIRPRMKTVSENFERIGS 709
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 29670376 29675328 - CrPI670011_11g018080.1 Cre11g1808 513553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g1808 709 MobiDBLite consensus disorder prediction 285 304 - -
Cre11g1808 709 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 167 707 IPR046959 -
Cre11g1808 709 FunFam Leucine-rich repeat receptor-like protein kinase 193 288 - -
Cre11g1808 709 SUPERFAMILY L domain-like 28 283 - -
Cre11g1808 709 CDD STKc_IRAK 417 707 - -
Cre11g1808 709 SMART serkin_6 415 707 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g1808 709 SUPERFAMILY Protein kinase-like (PK-like) 416 702 IPR011009 -
Cre11g1808 709 Gene3D Phosphorylase Kinase; domain 1 403 486 - -
Cre11g1808 709 Pfam Leucine Rich Repeat 193 215 IPR001611 GO:0005515(InterPro)
Cre11g1808 709 Pfam Leucine Rich Repeat 221 240 IPR001611 GO:0005515(InterPro)
Cre11g1808 709 MobiDBLite consensus disorder prediction 286 300 - -
Cre11g1808 709 Pfam Protein kinase domain 416 643 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g1808 709 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 23 189 - -
Cre11g1808 709 ProSiteProfiles Protein kinase domain profile. 411 707 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g1808 709 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Cre11g1808 709 Gene3D Transferase(Phosphotransferase) domain 1 487 709 - -
Cre11g1808 709 Gene3D Ribonuclease Inhibitor 25 186 IPR032675 -
Cre11g1808 709 Gene3D Ribonuclease Inhibitor 187 288 IPR032675 -
Cre11g1808 709 FunFam Leucine-rich repeat receptor-like protein kinase 394 486 - -
Cre11g1808 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g1808 709 FunFam Os07g0541700 protein 492 574 - -
Cre11g1808 709 Pfam Leucine rich repeat 97 155 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g0104 Cre-Chr4:2399386 Cre11g1808 Cre-Chr11:29670376 9.50E-94 dispersed
Cre11g1216 Cre-Chr11:10204964 Cre11g1808 Cre-Chr11:29670376 2.40E-89 dispersed
Cre11g1808 Cre-Chr11:29670376 Cre09g2306 Cre-Chr9:42322828 1.70E-48 dispersed
Cre11g1808 Cre-Chr11:29670376 Cre05g2421 Cre-Chr5:35664947 8.50E-112 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64564 PF00069 Pkinase 6.90E-33 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g1808 - - - 0.0