Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g1836 ATGGCGAAAGAGAGAGAACTACTCGTTTACTCAGCTAGATTGGCAGAGCAAGCTGAGAGATACGAAGAGATGGTTGAGAAAATGGAGAAAGTTGCAAAGTTAAACGTGGAATTGACTGTGGAAGAGAGAAATCTGCTATCTGTTGGTTATAAGAATGTAATAGGAGCTAGACGAGCTTCCTGGCGTATTTTATCTTCAATTGAACAGAAGGAAACTACCAAACATAATGAGAAGAATGTGGAACGGATAATTGGTTACAGGCATCGGGTTGAAGATGAGCTCTCTAAAATATGCAGTGACATATTGTCGATCATTGACCAACATCTCCTTCCATGTTCCTCAGCTGGAGAATCTACTGTATTCTACCATAAGATGAAAGGAGACTATTGTCGGTATTTGGCTGAGTTTAAATCTGGTGACGAGCGTAAACAAGTTGCAGATCAATCATTAAAGTCTTATGAGGCTGCATCTGCAATTGCTAACTCTGATTTGTCTCCAACTCATCCTATAAGACTTGGCTTGGCGCTGAACTTCTCTGTTTTCTACTATGAGATATTGAATTCCCCTGAAAGGGCCTGCCACCTTGCCAAGCAGGCCTTTGATGAGGCTATTGCAGAACTTGACAGTCTCAGTGAAGAATCCTACAAGGACAGTACCCTTATTATGCAACTCCTTAGGGACAACCTGACCCTGTGGACTTCTGATCTTCCAGACGAAGGTGGAGAGCAGTCCAATGCTGATGAACTTTAG 750 42.4 MAKERELLVYSARLAEQAERYEEMVEKMEKVAKLNVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKETTKHNEKNVERIIGYRHRVEDELSKICSDILSIIDQHLLPCSSAGESTVFYHKMKGDYCRYLAEFKSGDERKQVADQSLKSYEAASAIANSDLSPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKDSTLIMQLLRDNLTLWTSDLPDEGGEQSNADEL 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 29998120 30000832 - CrPI670011_11g018360.1 Cre11g1836 513581

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g1836 249 Pfam 14-3-3 protein 12 233 IPR023410 -
Cre11g1836 249 PRINTS 14-3-3 protein zeta signature 86 110 IPR000308 -
Cre11g1836 249 PRINTS 14-3-3 protein zeta signature 117 139 IPR000308 -
Cre11g1836 249 PRINTS 14-3-3 protein zeta signature 179 205 IPR000308 -
Cre11g1836 249 PRINTS 14-3-3 protein zeta signature 152 178 IPR000308 -
Cre11g1836 249 PRINTS 14-3-3 protein zeta signature 37 66 IPR000308 -
Cre11g1836 249 PRINTS 14-3-3 protein zeta signature 206 235 IPR000308 -
Cre11g1836 249 Coils Coil 11 34 - -
Cre11g1836 249 PIRSF 14-3-3 1 246 IPR000308 -
Cre11g1836 249 ProSitePatterns 14-3-3 proteins signature 2. 215 234 IPR023409 -
Cre11g1836 249 Gene3D - 1 246 IPR036815 -
Cre11g1836 249 SUPERFAMILY 14-3-3 protein 4 235 IPR036815 -
Cre11g1836 249 PANTHER 14-3-3 PROTEIN 4 238 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cre11g1836 249 ProSitePatterns 14-3-3 proteins signature 1. 43 53 IPR023409 -
Cre11g1836 249 SMART 1433_4 5 246 IPR023410 -
Cre11g1836 249 Coils Coil 193 213 - -
Cre11g1836 249 FunFam 14-3-3 protein epsilon 1 246 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g1836 K06630 - - csv:101213169 452.21
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g0978 Cre-Chr8:22915643 Cre11g1836 Cre-Chr11:29998120 2.30E-102 dispersed
Cre11g1836 Cre-Chr11:29998120 Cre11g1846 Cre-Chr11:30105296 9.40E-90 dispersed
Cre11g1836 Cre-Chr11:29998120 Cre08g1047 Cre-Chr8:23632186 2.10E-110 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g412 . . . . . . . . Cmo05g00524 . Cma01g01607 . Car01g01226 . . . Cpe07g00087 Bhi04g00762 . . . Hepe10g0497 . Lcy13g1561 Cla08g01110 Cam08g1563 Cec08g1137 Cco08g1263 Clacu08g1267 . Cre08g1047 . . Cone8ag0206 Cone12ag0218 Lsi04g02235 Csa03g04446 Chy04g00255 Cme03g01863 . . . . . . . . . Cmo01g01654 . Cma12g00101 Cma05g00501 Car05g00448 . . Cpe02g00372 . . . . . . . Cla11g01382 Cam11g1440 Cec11g1466 Cco11g1462 Clacu11g1597 Cmu11g1416 Cre11g1836 Lsi08g00896 Csa02g02151 Chy03g01367 Cme04g00285
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cre08g1063 . 4 242 14-3-3 family AT4G09000 90.8 7.2e-119 424.1
Cre11g1846 . 5 242 14-3-3 family AT4G09000 90.3 3.6e-118 421.8
Cre07g1973 . 6 241 14-3-3 family AT4G09000 86.9 1.3e-112 403.3
Cre08g1124 . 10 246 14-3-3 family AT4G09000 74.7 3.2e-98 355.5
Cre07g0637 . 7 238 14-3-3 family AT4G09000 72.6 5.2e-93 338.2
Cre05g2547 . 4 239 14-3-3 family AT4G09000 72.3 1.7e-91 333.2
Cre08g0978 . 4 239 14-3-3 family AT4G09000 71.8 8.3e-91 330.9
Cre08g1047 . 71 308 14-3-3 family AT4G09000 68.8 5.4e-90 328.2
Cre11g1836 . 5 236 14-3-3 family AT4G09000 73.1 1.6e-89 326.6
Cre08g1063 . 6 261 14-3-3 family AT1G78300 89.8 1.6e-124 442.6
Cre11g1846 . 5 258 14-3-3 family AT1G78300 91.0 1.6e-124 442.6
Cre07g1973 . 6 253 14-3-3 family AT1G78300 87.1 5.5e-117 417.5
Cre08g1124 . 11 247 14-3-3 family AT1G78300 75.9 6.1e-100 360.9
Cre07g0637 . 7 247 14-3-3 family AT1G78300 71.6 2.3e-94 342.4
Cre08g0978 . 8 257 14-3-3 family AT1G78300 70.6 5.5e-93 337.8
Cre05g2547 . 8 255 14-3-3 family AT1G78300 70.8 9.5e-93 337.0
Cre08g1047 . 73 322 14-3-3 family AT1G78300 67.9 6.1e-92 334.3
Cre11g1836 . 1 243 14-3-3 family AT1G78300 69.4 5.7e-90 327.8
Cre07g1973 . 6 259 14-3-3 family AT5G38480 90.6 7.8e-124 440.3
Cre08g1063 . 6 252 14-3-3 family AT5G38480 85.8 1.1e-114 409.8
Cre11g1846 . 6 252 14-3-3 family AT5G38480 85.4 2.5e-114 408.7
Cre08g1124 . 10 251 14-3-3 family AT5G38480 74.0 2.8e-97 352.1
Cre05g2547 . 8 255 14-3-3 family AT5G38480 73.6 4.9e-94 341.3
Cre07g0637 . 7 247 14-3-3 family AT5G38480 72.4 2.4e-93 339.0
Cre08g1047 . 77 319 14-3-3 family AT5G38480 72.2 7.1e-93 337.4
Cre08g0978 . 8 255 14-3-3 family AT5G38480 72.0 9.3e-93 337.0
Cre11g1836 . 5 248 14-3-3 family AT5G38480 71.1 2.1e-89 325.9
Cre08g1063 . 3 242 14-3-3 family AT1G35160 90.0 1.5e-118 422.9
Cre11g1846 . 4 242 14-3-3 family AT1G35160 89.5 7.4e-118 420.6
Cre07g1973 . 6 240 14-3-3 family AT1G35160 86.8 6.1e-112 401.0
Cre08g1124 . 1 246 14-3-3 family AT1G35160 73.2 3.8e-98 355.1
Cre07g0637 . 2 237 14-3-3 family AT1G35160 71.4 1.4e-92 336.7
Cre05g2547 . 8 239 14-3-3 family AT1G35160 73.1 2.7e-91 332.4
Cre08g0978 . 8 239 14-3-3 family AT1G35160 72.6 1.3e-90 330.1
Cre08g1047 . 71 308 14-3-3 family AT1G35160 68.8 2.2e-90 329.3
Cre11g1836 . 5 236 14-3-3 family AT1G35160 73.1 1.9e-89 326.2
Cre07g1973 . 5 254 14-3-3 family AT5G16050 86.4 2.6e-117 418.7
Cre08g1063 . 3 253 14-3-3 family AT5G16050 79.3 1.3e-108 389.8
Cre11g1846 . 4 251 14-3-3 family AT5G16050 79.5 5.9e-106 380.9
Cre08g1124 . 10 248 14-3-3 family AT5G16050 71.1 2.2e-92 335.9
Cre08g0978 . 3 246 14-3-3 family AT5G16050 66.3 2.6e-85 312.4
Cre07g0637 . 1 246 14-3-3 family AT5G16050 65.5 5.7e-85 311.2
Cre05g2547 . 3 246 14-3-3 family AT5G16050 65.0 9.8e-85 310.5
Cre08g1047 . 74 319 14-3-3 family AT5G16050 64.9 2.2e-84 309.3
Cre11g1836 . 5 242 14-3-3 family AT5G16050 66.3 1.7e-81 299.7
Cre08g1124 . 9 246 14-3-3 family AT5G10450 86.6 5.1e-113 404.4
Cre11g1846 . 1 242 14-3-3 family AT5G10450 79.4 1.5e-104 376.3
Cre08g1063 . 3 251 14-3-3 family AT5G10450 76.8 1.9e-104 375.9
Cre07g1973 . 7 259 14-3-3 family AT5G10450 74.0 3.7e-103 371.7
Cre07g0637 . 1 238 14-3-3 family AT5G10450 67.6 5.7e-88 321.2
Cre08g1047 . 77 308 14-3-3 family AT5G10450 67.2 2.6e-85 312.4
Cre05g2547 . 3 239 14-3-3 family AT5G10450 66.3 7.6e-85 310.8
Cre11g1836 . 5 236 14-3-3 family AT5G10450 67.7 3.8e-84 308.5
Cre08g0978 . 3 239 14-3-3 family AT5G10450 65.4 2.5e-83 305.8
Cre07g1973 . 4 261 14-3-3 family AT3G02520 91.5 1.9e-128 455.7
Cre08g1063 . 6 252 14-3-3 family AT3G02520 87.1 8.7e-118 420.2
Cre11g1846 . 5 258 14-3-3 family AT3G02520 84.8 5.6e-117 417.5
Cre08g1124 . 10 248 14-3-3 family AT3G02520 75.7 6.3e-100 360.9
Cre08g0978 . 8 257 14-3-3 family AT3G02520 69.4 3.3e-93 338.6
Cre05g2547 . 8 256 14-3-3 family AT3G02520 68.9 4.3e-93 338.2
Cre08g1047 . 73 321 14-3-3 family AT3G02520 69.4 1.7e-92 336.3
Cre07g0637 . 4 238 14-3-3 family AT3G02520 71.7 1.8e-91 332.8
Cre11g1836 . 1 241 14-3-3 family AT3G02520 71.6 1.2e-90 330.1
Cre08g1124 . 9 246 14-3-3 family AT5G65430 88.2 6.8e-115 410.6
Cre11g1846 . 1 242 14-3-3 family AT5G65430 80.2 4.9e-105 377.9
Cre08g1063 . 8 242 14-3-3 family AT5G65430 80.5 9.2e-104 373.6
Cre07g1973 . 7 241 14-3-3 family AT5G65430 79.2 1.2e-103 373.2
Cre07g0637 . 1 238 14-3-3 family AT5G65430 69.3 2.2e-89 325.9
Cre05g2547 . 8 239 14-3-3 family AT5G65430 69.8 4.6e-87 318.2
Cre08g1047 . 77 308 14-3-3 family AT5G65430 69.4 1.7e-86 316.2
Cre11g1836 . 5 236 14-3-3 family AT5G65430 69.4 1.9e-85 312.8
Cre08g0978 . 8 239 14-3-3 family AT5G65430 68.5 9.5e-85 310.5
Cre11g1866 . 1 81 14-3-3 family AT5G65430 90.1 1.6e-36 150.2
Cre07g0637 . 1 257 14-3-3 family AT2G42590 81.0 2.9e-116 415.2
Cre08g1047 . 75 314 14-3-3 family AT2G42590 77.9 5.7e-104 374.4
Cre05g2547 . 6 257 14-3-3 family AT2G42590 75.5 7.4e-104 374.0
Cre08g0978 . 6 253 14-3-3 family AT2G42590 75.4 1.1e-102 370.2
Cre11g1836 . 3 245 14-3-3 family AT2G42590 74.9 3.5e-101 365.2
Cre07g1973 . 8 248 14-3-3 family AT2G42590 73.0 1.5e-91 333.2
Cre08g1063 . 8 248 14-3-3 family AT2G42590 70.5 4.2e-91 331.6
Cre11g1846 . 8 245 14-3-3 family AT2G42590 71.4 2.1e-90 329.3
Cre08g1124 . 11 248 14-3-3 family AT2G42590 64.7 8.0e-82 300.8
Cre08g1047 . 73 313 14-3-3 family AT1G22300 80.5 1.0e-104 376.7
Cre07g0637 . 6 242 14-3-3 family AT1G22300 78.5 2.0e-103 372.5
Cre05g2547 . 5 244 14-3-3 family AT1G22300 77.5 3.7e-102 368.2
Cre08g0978 . 5 244 14-3-3 family AT1G22300 76.7 1.8e-101 365.9
Cre11g1836 . 1 241 14-3-3 family AT1G22300 76.8 1.7e-99 359.4
Cre07g1973 . 4 246 14-3-3 family AT1G22300 70.4 3.9e-91 331.6
Cre08g1063 . 8 246 14-3-3 family AT1G22300 70.3 1.0e-88 323.6
Cre11g1846 . 8 245 14-3-3 family AT1G22300 69.3 2.6e-87 318.9
Cre08g1124 . 11 248 14-3-3 family AT1G22300 64.7 1.5e-79 293.1
Cre07g0637 . 6 246 14-3-3 family AT1G34760 80.5 2.8e-105 378.6
Cre08g1047 . 73 317 14-3-3 family AT1G34760 80.4 6.1e-105 377.5
Cre05g2547 . 5 247 14-3-3 family AT1G34760 80.2 1.0e-104 376.7
Cre08g0978 . 5 247 14-3-3 family AT1G34760 79.4 6.8e-104 374.0
Cre11g1836 . 1 244 14-3-3 family AT1G34760 77.5 5.0e-99 357.8
Cre07g1973 . 4 250 14-3-3 family AT1G34760 70.9 1.2e-89 326.6
Cre08g1063 . 8 245 14-3-3 family AT1G34760 72.3 6.2e-89 324.3
Cre11g1846 . 8 249 14-3-3 family AT1G34760 69.4 5.2e-88 321.2
Cre08g1124 . 11 247 14-3-3 family AT1G34760 64.1 2.9e-78 288.9
Cre05g2547 . 2 254 14-3-3 family AT1G26480 86.6 1.8e-118 422.5
Cre08g0978 . 2 254 14-3-3 family AT1G26480 85.8 8.8e-118 420.2
Cre07g0637 . 3 242 14-3-3 family AT1G26480 80.8 4.8e-108 387.9
Cre08g1047 . 74 321 14-3-3 family AT1G26480 77.0 8.5e-105 377.1
Cre11g1836 . 3 242 14-3-3 family AT1G26480 78.3 1.2e-101 366.7
Cre08g1063 . 8 260 14-3-3 family AT1G26480 72.0 5.7e-93 337.8
Cre11g1846 . 8 247 14-3-3 family AT1G26480 73.8 1.4e-91 333.2
Cre07g1973 . 5 256 14-3-3 family AT1G26480 72.0 2.4e-91 332.4
Cre08g1124 . 11 244 14-3-3 family AT1G26480 66.2 1.9e-80 296.2
Cre05g2547 . 5 237 14-3-3 family AT1G78220 52.6 1.0e-64 243.8
Cre07g0637 . 6 236 14-3-3 family AT1G78220 51.3 1.1e-63 240.4
Cre08g1047 . 73 306 14-3-3 family AT1G78220 50.6 9.6e-63 237.3
Cre08g0978 . 5 237 14-3-3 family AT1G78220 50.9 2.1e-62 236.1
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000281 3 7 3 4 1 5 6 5 5 3 5 5 6 5 5 5 5 6 6 5 5 5 5 4 4 5 4 9 8 4 148