Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g1836 ATGGCGAAAGAGAGAGAACTACTCGTTTACTCAGCTAGATTGGCAGAGCAAGCTGAGAGATACGAAGAGATGGTTGAGAAAATGGAGAAAGTTGCAAAGTTAAACGTGGAATTGACTGTGGAAGAGAGAAATCTGCTATCTGTTGGTTATAAGAATGTAATAGGAGCTAGACGAGCTTCCTGGCGTATTTTATCTTCAATTGAACAGAAGGAAACTACCAAACATAATGAGAAGAATGTGGAACGGATAATTGGTTACAGGCATCGGGTTGAAGATGAGCTCTCTAAAATATGCAGTGACATATTGTCGATCATTGACCAACATCTCCTTCCATGTTCCTCAGCTGGAGAATCTACTGTATTCTACCATAAGATGAAAGGAGACTATTGTCGGTATTTGGCTGAGTTTAAATCTGGTGACGAGCGTAAACAAGTTGCAGATCAATCATTAAAGTCTTATGAGGCTGCATCTGCAATTGCTAACTCTGATTTGTCTCCAACTCATCCTATAAGACTTGGCTTGGCGCTGAACTTCTCTGTTTTCTACTATGAGATATTGAATTCCCCTGAAAGGGCCTGCCACCTTGCCAAGCAGGCCTTTGATGAGGCTATTGCAGAACTTGACAGTCTCAGTGAAGAATCCTACAAGGACAGTACCCTTATTATGCAACTCCTTAGGGACAACCTGACCCTGTGGACTTCTGATCTTCCAGACGAAGGTGGAGAGCAGTCCAATGCTGATGAACTTTAG 750 42.4 MAKERELLVYSARLAEQAERYEEMVEKMEKVAKLNVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKETTKHNEKNVERIIGYRHRVEDELSKICSDILSIIDQHLLPCSSAGESTVFYHKMKGDYCRYLAEFKSGDERKQVADQSLKSYEAASAIANSDLSPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKDSTLIMQLLRDNLTLWTSDLPDEGGEQSNADEL 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 29998120 30000832 - CrPI670011_11g018360.1 Cre11g1836 513581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g1836 249 Pfam 14-3-3 protein 12 233 IPR023410 -
Cre11g1836 249 PRINTS 14-3-3 protein zeta signature 86 110 IPR000308 -
Cre11g1836 249 PRINTS 14-3-3 protein zeta signature 117 139 IPR000308 -
Cre11g1836 249 PRINTS 14-3-3 protein zeta signature 179 205 IPR000308 -
Cre11g1836 249 PRINTS 14-3-3 protein zeta signature 152 178 IPR000308 -
Cre11g1836 249 PRINTS 14-3-3 protein zeta signature 37 66 IPR000308 -
Cre11g1836 249 PRINTS 14-3-3 protein zeta signature 206 235 IPR000308 -
Cre11g1836 249 Coils Coil 11 34 - -
Cre11g1836 249 PIRSF 14-3-3 1 246 IPR000308 -
Cre11g1836 249 ProSitePatterns 14-3-3 proteins signature 2. 215 234 IPR023409 -
Cre11g1836 249 Gene3D - 1 246 IPR036815 -
Cre11g1836 249 SUPERFAMILY 14-3-3 protein 4 235 IPR036815 -
Cre11g1836 249 PANTHER 14-3-3 PROTEIN 4 238 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cre11g1836 249 ProSitePatterns 14-3-3 proteins signature 1. 43 53 IPR023409 -
Cre11g1836 249 SMART 1433_4 5 246 IPR023410 -
Cre11g1836 249 Coils Coil 193 213 - -
Cre11g1836 249 FunFam 14-3-3 protein epsilon 1 246 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g0978 Cre-Chr8:22915643 Cre11g1836 Cre-Chr11:29998120 2.30E-102 dispersed
Cre11g1836 Cre-Chr11:29998120 Cre11g1846 Cre-Chr11:30105296 9.40E-90 dispersed
Cre11g1836 Cre-Chr11:29998120 Cre08g1047 Cre-Chr8:23632186 2.10E-110 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g1836 K06630 - csv:101213169 452.21