Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g1846 ATGGCGGTCACCTCTTCCCCTCGCGAGGAGTATGTTTACATGGCCAAGCTTGCCGAGCAAGCTGAGCGCTATGAGGAGATGGTCGAGTTTATGGAGAAGGTCTCCGCCGCTACAGACAACGAGGAGCTCACCGTCGAGGAGCGGAACCTGCTCTCTGTTGCTTACAAGAATGTTATTGGAGCGCGTAGAGCCTCCTGGAGGATTATTTCCTCCATTGAACAGAAGGAGGAGAGCCGAGGGAATGATGATCATGTCTCCGTTATCCGAGAATACAGATCCAAGATCGAGACTGAGCTCTCCAACATCTGTGATGGGATCCTTAAGCTTCTTGACTCCCGTCTCATTTCCTCTGCTGCGTCTGGTGACTCCAAGGTGTTTTATCTCAAGATGAAGGGAGATTATCATAGATACCTTGCTGAATTCAAGACCGGAGCCGAGCGGAAGGAAGCTGCCGAAAGTACTCTCACTGCTTATAAATCTGCACAGGATATTGCAAATGCTGAACTTGCTCCTACTCACCCCATACGACTTGGGCTGGCTTTGAACTTCTCAGTGTTCTATTATGAGATTCTGAATTCCCCTGATCGTGCTTGCAGCCTTGCTAAACAGGCATTCGATGAAGCAATTGCTGAGTTGGATACACTGGGCGAGGAATCATACAAAGATAGCACTTTGATCATGCAACTTCTTCGTGACAACCTCACTCTATGGACTTCGGACATGCAGGATGATGGAGATGAGATTAAAGAAGCAGCTCCCAAACGTGACGATGAATAG 777 48.52 MAVTSSPREEYVYMAKLAEQAERYEEMVEFMEKVSAATDNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSVIREYRSKIETELSNICDGILKLLDSRLISSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGDEIKEAAPKRDDE 258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30105296 30107307 + CrPI670011_11g018460.1 Cre11g1846 513591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g1846 258 PIRSF 14-3-3 2 250 IPR000308 -
Cre11g1846 258 SMART 1433_4 8 250 IPR023410 -
Cre11g1846 258 FunFam 14-3-3 protein epsilon 4 251 - -
Cre11g1846 258 Coils Coil 14 34 - -
Cre11g1846 258 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Cre11g1846 258 Pfam 14-3-3 protein 14 238 IPR023410 -
Cre11g1846 258 Gene3D - 1 252 IPR036815 -
Cre11g1846 258 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Cre11g1846 258 PANTHER 14-3-3 PROTEIN 8 243 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cre11g1846 258 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Cre11g1846 258 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Cre11g1846 258 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Cre11g1846 258 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Cre11g1846 258 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Cre11g1846 258 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Cre11g1846 258 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1973 Cre-Chr7:35160388 Cre11g1846 Cre-Chr11:30105296 3.20E-117 dispersed
Cre08g1124 Cre-Chr8:24432630 Cre11g1846 Cre-Chr11:30105296 5.40E-101 dispersed
Cre11g1836 Cre-Chr11:29998120 Cre11g1846 Cre-Chr11:30105296 9.40E-90 dispersed
Cre11g1846 Cre-Chr11:30105296 Cre11g1866 Cre-Chr11:30321977 1.10E-35 dispersed
Cre11g1846 Cre-Chr11:30105296 Cre08g1063 Cre-Chr8:23757153 4.30E-130 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g1846 K06630 - csv:101210822 494.967