Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre11g1866 | GATATTGCAGCTGCCGATCTTGCACCAACGCATCCAATCAGGCTGGGCCTAGCACTAAATTTCTCTGTTTTTTACTTTGAGATCCTGAACCAGCCTGACAAAGCCTGTAGCATGGCCAAACAGGCATTTGAAGAAGCCATTGCGGAATTGGACACATTAGGTGAAGAATCATACAAGGATAGCACTCTAATCATGCAGCTCTTAAGAGACAATCTCACCCTTTGGACTTCTGATACACAGATTATCGGTCGGAGTTTGATTCCTTCTAGGGTTTCTCTGAGTTCTCTCTCGTCTCATGGAGGACTTCGCCTTTCACGATGGCAACGTCTGCGGTTTGCTCGAGAGAAGGCACATCAACTTTCGTCAAGATCCTACCTATGGTTTGCAGATGCACTCGTCATTCATCCAAAGACTCTCCCAGGAAAAGGAACTGGAGTGGCCTGGAATTCTCGTGGTTCGCTTTTGATATCTGGATCAGATGACACCCGGATAAACATCTGGAGCTATTCTGGTCGAAAACTATTGCACTCTGTGGATACTGGGCATTCTGCAAACATATTTTGTACAAAATTTGTTCCTGAAACGTCTGATGAACTCGTGGTCTCAGGAGCTGGGGATGCAGAGGTGCGCTTGTTTAATTTATCTCGCTTACGTGGGAGAGGACAAGATGATAATCCCATATCTTCATTGGCTTTGTATCAGTGTCACACCAGAAGAGTAAAAAAATTAGCTGTTGAAATAGGGAATCCAAATGTAGTATGGAGTGCTAGTGAGGATGGGACTCTTAGACAGCATGATTTTCGAGAGGGCATGTCTTGTCCTCCTGACGGAGCTTCTCACCAAGAATGCCACAATGTTCTTCTTGATTTGCGGTGTGGAGCTAAGAGGTCATTGGCTGATCCTCCCAGACAAACCCTTGCTTTGAAATCCTGTGACGTTAGTTCCACTAGGCCTCATTTACTTCTGGTTGGTGGAAGTGATGCATTTGCACGGTTATATGATAGAAGGATGCTGCCGCCCTTGTCTTCCAGCCAGAAGAGGATGTCACCGCCTCCCTGTGTTAACTACTTCTGTCCAATGCATCTCTCTGATCGGGTTCGATCGGGTTTGCATTTGACTCATGTTACTTTTAGTCCGAATGGAGAAGAGATTCTGCTTAGCTATAGTGGAGAACATGTATACTTGATGAATGTAAATCATGCTGGCCTAAATACAATGCAGTATACATCAGGAGATGTTTCTAAGTTAATGAGCTTCACTCCTGTACTCAACGGATTGGAATTGCAGCATCCGGTTTCCAATCTATCAAATGGTTTGCCTTTAAATTGTGGTGTTAATGCAAAGCTTGATAAATGCAGAAAATTATTACAAATTGCTGAAAAATGCTTGGACGGTGGGAACTACTTTGGTGGAATAGAGGCATGCAATGAAATTTTGGATGGATATGGTCGTAATATTGGTGTTATTTTCAAGCACGATACATTATGCACACGTGCTGCCTTATTACTCAAGCGGAAGTGGAAGAATGATGTTCATATGGCCATAAGAGATTGTTATAGTGCTAGGAAAATGGATCATTCCTCTTTCAGAGCACATTACTACATGTGCGAAGCTCTATCGCAGCTGGGTAGACATAAGGAAGCCCTAGATTTTGCATTTGCTGCTCAGTGTTTAGCCCCATCTAACCCTGAAGTGGCAGAGAAGGTGGAAAGTGTAAAGAGGGAACTCGCAGCAGCTGAACTGGAAAAATCAAATAAAGGCAATGATGGAGCTCTAAGATCAGCACCGTTAGGTGGTGTATTATCATTAAGTGACTTTCTTTACCGCTCAGATGCAAATAGTGATGTTTCACAAGATGGGCTGAGATCAGAAAGAGAAGATTCTGATTATGATGAGGAGGTGGAGCTGGACTTTGAAACCTTATCAGGTGATGAAGCCCATGATGTCGATTCCAACGTTCTACATGGAAGTTTAAATCTTAGAATACATAGACGAGTTGATCCAGCAAGAGAGAGGGTTGGCCCAAACGGCTCCTGTGGGTCTCCTTCATCATCACAAAATGATGCAACACTTTATCAGCCGGAACCCGTCATTGATATGAAGCAAAGATATGTAGGTCATTGTAACATCGGAACTGATATTAAACAAGCCAGTTTTCTCGGGCAAAGAGGTGAATACGTTGCCAGTGGTAGCGATGATGGTAGATGGTTTATTTGGGAAAAGGGAACTGGTAGACTGGTTAAAATACTTGTTGGAGATGGAGCTGTTGTGAATTGTGTTCAAAGTCATCCATTTGATTGTGCCATCGCTACTAGCGGGATCGACAATACCATAAAGCTATGGACTCCAACTGATCCAGTCCCGTCACTCATAGCCGGTGGAGCGGTCGGACCGCAGGCAGCCGACGTGTTGGCTGTAATAGAGAATAATCAGCGCAGACTCTGCCGTAATAGAGAAGCCATACTGCCTTTTGAAATTTTAGAGCGGTTTAGGATGCATGATTTCTCTGAAGGAAGCCTTCATCCATTTGAATGTGCTCAGAGTTGA | 2547 | 43.93 | DIAAADLAPTHPIRLGLALNFSVFYFEILNQPDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDTQIIGRSLIPSRVSLSSLSSHGGLRLSRWQRLRFAREKAHQLSSRSYLWFADALVIHPKTLPGKGTGVAWNSRGSLLISGSDDTRINIWSYSGRKLLHSVDTGHSANIFCTKFVPETSDELVVSGAGDAEVRLFNLSRLRGRGQDDNPISSLALYQCHTRRVKKLAVEIGNPNVVWSASEDGTLRQHDFREGMSCPPDGASHQECHNVLLDLRCGAKRSLADPPRQTLALKSCDVSSTRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSDRVRSGLHLTHVTFSPNGEEILLSYSGEHVYLMNVNHAGLNTMQYTSGDVSKLMSFTPVLNGLELQHPVSNLSNGLPLNCGVNAKLDKCRKLLQIAEKCLDGGNYFGGIEACNEILDGYGRNIGVIFKHDTLCTRAALLLKRKWKNDVHMAIRDCYSARKMDHSSFRAHYYMCEALSQLGRHKEALDFAFAAQCLAPSNPEVAEKVESVKRELAAAELEKSNKGNDGALRSAPLGGVLSLSDFLYRSDANSDVSQDGLRSEREDSDYDEEVELDFETLSGDEAHDVDSNVLHGSLNLRIHRRVDPARERVGPNGSCGSPSSSQNDATLYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDGRWFIWEKGTGRLVKILVGDGAVVNCVQSHPFDCAIATSGIDNTIKLWTPTDPVPSLIAGGAVGPQAADVLAVIENNQRRLCRNREAILPFEILERFRMHDFSEGSLHPFECAQS | 848 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 30321977 | 30339946 | - | CrPI670011_11g018660.1 | Cre11g1866 | 513611 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre11g1866 | 848 | MobiDBLite | consensus disorder prediction | 665 | 690 | - | - | |
Cre11g1866 | 848 | Gene3D | - | 699 | 824 | IPR015943 | GO:0005515(InterPro) | |
Cre11g1866 | 848 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 146 | 177 | IPR001680 | GO:0005515(InterPro) | |
Cre11g1866 | 848 | PANTHER | WD REPEAT DOMAIN-CONTAINING FAMILY | 146 | 837 | IPR045151 | GO:0005737(PANTHER)|GO:0045717(PANTHER)|GO:0080008(PANTHER) | |
Cre11g1866 | 848 | SUPERFAMILY | WD40 repeat-like | 143 | 781 | IPR036322 | GO:0005515(InterPro) | |
Cre11g1866 | 848 | Coils | Coil | 562 | 589 | - | - | |
Cre11g1866 | 848 | ProSitePatterns | 14-3-3 proteins signature 2. | 58 | 77 | IPR023409 | - | |
Cre11g1866 | 848 | Gene3D | - | 135 | 424 | IPR015943 | GO:0005515(InterPro) | |
Cre11g1866 | 848 | PRINTS | 14-3-3 protein zeta signature | 49 | 78 | IPR000308 | - | |
Cre11g1866 | 848 | PRINTS | 14-3-3 protein zeta signature | 22 | 48 | IPR000308 | - | |
Cre11g1866 | 848 | SMART | 1433_4 | 1 | 89 | IPR023410 | - | |
Cre11g1866 | 848 | Pfam | 14-3-3 protein | 2 | 76 | IPR023410 | - | |
Cre11g1866 | 848 | FunFam | Transducin family protein / WD-40 repeat family protein | 651 | 825 | - | - | |
Cre11g1866 | 848 | Gene3D | - | 1 | 84 | IPR036815 | - | |
Cre11g1866 | 848 | SMART | WD40_4 | 697 | 740 | IPR001680 | GO:0005515(InterPro) | |
Cre11g1866 | 848 | SMART | WD40_4 | 226 | 266 | IPR001680 | GO:0005515(InterPro) | |
Cre11g1866 | 848 | SMART | WD40_4 | 132 | 168 | IPR001680 | GO:0005515(InterPro) | |
Cre11g1866 | 848 | SMART | WD40_4 | 743 | 782 | IPR001680 | GO:0005515(InterPro) | |
Cre11g1866 | 848 | SMART | WD40_4 | 294 | 334 | IPR001680 | GO:0005515(InterPro) | |
Cre11g1866 | 848 | SMART | WD40_4 | 171 | 213 | IPR001680 | GO:0005515(InterPro) | |
Cre11g1866 | 848 | Pfam | WD domain, G-beta repeat | 745 | 781 | IPR001680 | GO:0005515(InterPro) | |
Cre11g1866 | 848 | Pfam | WD domain, G-beta repeat | 144 | 168 | IPR001680 | GO:0005515(InterPro) | |
Cre11g1866 | 848 | SUPERFAMILY | 14-3-3 protein | 2 | 79 | IPR036815 | - | |
Cre11g1866 | 848 | Gene3D | Tetratricopeptide repeat domain | 444 | 592 | IPR011990 | GO:0005515(InterPro) | |
Cre11g1866 | 848 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 750 | 781 | IPR001680 | GO:0005515(InterPro) | |
Cre11g1866 | 848 | MobiDBLite | consensus disorder prediction | 613 | 632 | - | - | |
Cre11g1866 | 848 | SUPERFAMILY | TPR-like | 449 | 568 | IPR011990 | GO:0005515(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g2385 | Cre-Chr2:37278792 | Cre11g1866 | Cre-Chr11:30321977 | 6.30E-18 | dispersed | |
Cre11g1846 | Cre-Chr11:30105296 | Cre11g1866 | Cre-Chr11:30321977 | 1.10E-35 | dispersed | |
Cre11g1866 | Cre-Chr11:30321977 | Cre02g0742 | Cre-Chr2:4264971 | 2.30E-18 | dispersed | |
Cre11g1866 | Cre-Chr11:30321977 | Cre08g1124 | Cre-Chr8:24432630 | 2.80E-37 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre11g1866 | K11807 | - | csv:101206836 | 1350.88 |