Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g1866 GATATTGCAGCTGCCGATCTTGCACCAACGCATCCAATCAGGCTGGGCCTAGCACTAAATTTCTCTGTTTTTTACTTTGAGATCCTGAACCAGCCTGACAAAGCCTGTAGCATGGCCAAACAGGCATTTGAAGAAGCCATTGCGGAATTGGACACATTAGGTGAAGAATCATACAAGGATAGCACTCTAATCATGCAGCTCTTAAGAGACAATCTCACCCTTTGGACTTCTGATACACAGATTATCGGTCGGAGTTTGATTCCTTCTAGGGTTTCTCTGAGTTCTCTCTCGTCTCATGGAGGACTTCGCCTTTCACGATGGCAACGTCTGCGGTTTGCTCGAGAGAAGGCACATCAACTTTCGTCAAGATCCTACCTATGGTTTGCAGATGCACTCGTCATTCATCCAAAGACTCTCCCAGGAAAAGGAACTGGAGTGGCCTGGAATTCTCGTGGTTCGCTTTTGATATCTGGATCAGATGACACCCGGATAAACATCTGGAGCTATTCTGGTCGAAAACTATTGCACTCTGTGGATACTGGGCATTCTGCAAACATATTTTGTACAAAATTTGTTCCTGAAACGTCTGATGAACTCGTGGTCTCAGGAGCTGGGGATGCAGAGGTGCGCTTGTTTAATTTATCTCGCTTACGTGGGAGAGGACAAGATGATAATCCCATATCTTCATTGGCTTTGTATCAGTGTCACACCAGAAGAGTAAAAAAATTAGCTGTTGAAATAGGGAATCCAAATGTAGTATGGAGTGCTAGTGAGGATGGGACTCTTAGACAGCATGATTTTCGAGAGGGCATGTCTTGTCCTCCTGACGGAGCTTCTCACCAAGAATGCCACAATGTTCTTCTTGATTTGCGGTGTGGAGCTAAGAGGTCATTGGCTGATCCTCCCAGACAAACCCTTGCTTTGAAATCCTGTGACGTTAGTTCCACTAGGCCTCATTTACTTCTGGTTGGTGGAAGTGATGCATTTGCACGGTTATATGATAGAAGGATGCTGCCGCCCTTGTCTTCCAGCCAGAAGAGGATGTCACCGCCTCCCTGTGTTAACTACTTCTGTCCAATGCATCTCTCTGATCGGGTTCGATCGGGTTTGCATTTGACTCATGTTACTTTTAGTCCGAATGGAGAAGAGATTCTGCTTAGCTATAGTGGAGAACATGTATACTTGATGAATGTAAATCATGCTGGCCTAAATACAATGCAGTATACATCAGGAGATGTTTCTAAGTTAATGAGCTTCACTCCTGTACTCAACGGATTGGAATTGCAGCATCCGGTTTCCAATCTATCAAATGGTTTGCCTTTAAATTGTGGTGTTAATGCAAAGCTTGATAAATGCAGAAAATTATTACAAATTGCTGAAAAATGCTTGGACGGTGGGAACTACTTTGGTGGAATAGAGGCATGCAATGAAATTTTGGATGGATATGGTCGTAATATTGGTGTTATTTTCAAGCACGATACATTATGCACACGTGCTGCCTTATTACTCAAGCGGAAGTGGAAGAATGATGTTCATATGGCCATAAGAGATTGTTATAGTGCTAGGAAAATGGATCATTCCTCTTTCAGAGCACATTACTACATGTGCGAAGCTCTATCGCAGCTGGGTAGACATAAGGAAGCCCTAGATTTTGCATTTGCTGCTCAGTGTTTAGCCCCATCTAACCCTGAAGTGGCAGAGAAGGTGGAAAGTGTAAAGAGGGAACTCGCAGCAGCTGAACTGGAAAAATCAAATAAAGGCAATGATGGAGCTCTAAGATCAGCACCGTTAGGTGGTGTATTATCATTAAGTGACTTTCTTTACCGCTCAGATGCAAATAGTGATGTTTCACAAGATGGGCTGAGATCAGAAAGAGAAGATTCTGATTATGATGAGGAGGTGGAGCTGGACTTTGAAACCTTATCAGGTGATGAAGCCCATGATGTCGATTCCAACGTTCTACATGGAAGTTTAAATCTTAGAATACATAGACGAGTTGATCCAGCAAGAGAGAGGGTTGGCCCAAACGGCTCCTGTGGGTCTCCTTCATCATCACAAAATGATGCAACACTTTATCAGCCGGAACCCGTCATTGATATGAAGCAAAGATATGTAGGTCATTGTAACATCGGAACTGATATTAAACAAGCCAGTTTTCTCGGGCAAAGAGGTGAATACGTTGCCAGTGGTAGCGATGATGGTAGATGGTTTATTTGGGAAAAGGGAACTGGTAGACTGGTTAAAATACTTGTTGGAGATGGAGCTGTTGTGAATTGTGTTCAAAGTCATCCATTTGATTGTGCCATCGCTACTAGCGGGATCGACAATACCATAAAGCTATGGACTCCAACTGATCCAGTCCCGTCACTCATAGCCGGTGGAGCGGTCGGACCGCAGGCAGCCGACGTGTTGGCTGTAATAGAGAATAATCAGCGCAGACTCTGCCGTAATAGAGAAGCCATACTGCCTTTTGAAATTTTAGAGCGGTTTAGGATGCATGATTTCTCTGAAGGAAGCCTTCATCCATTTGAATGTGCTCAGAGTTGA 2547 43.93 DIAAADLAPTHPIRLGLALNFSVFYFEILNQPDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDTQIIGRSLIPSRVSLSSLSSHGGLRLSRWQRLRFAREKAHQLSSRSYLWFADALVIHPKTLPGKGTGVAWNSRGSLLISGSDDTRINIWSYSGRKLLHSVDTGHSANIFCTKFVPETSDELVVSGAGDAEVRLFNLSRLRGRGQDDNPISSLALYQCHTRRVKKLAVEIGNPNVVWSASEDGTLRQHDFREGMSCPPDGASHQECHNVLLDLRCGAKRSLADPPRQTLALKSCDVSSTRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSDRVRSGLHLTHVTFSPNGEEILLSYSGEHVYLMNVNHAGLNTMQYTSGDVSKLMSFTPVLNGLELQHPVSNLSNGLPLNCGVNAKLDKCRKLLQIAEKCLDGGNYFGGIEACNEILDGYGRNIGVIFKHDTLCTRAALLLKRKWKNDVHMAIRDCYSARKMDHSSFRAHYYMCEALSQLGRHKEALDFAFAAQCLAPSNPEVAEKVESVKRELAAAELEKSNKGNDGALRSAPLGGVLSLSDFLYRSDANSDVSQDGLRSEREDSDYDEEVELDFETLSGDEAHDVDSNVLHGSLNLRIHRRVDPARERVGPNGSCGSPSSSQNDATLYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDGRWFIWEKGTGRLVKILVGDGAVVNCVQSHPFDCAIATSGIDNTIKLWTPTDPVPSLIAGGAVGPQAADVLAVIENNQRRLCRNREAILPFEILERFRMHDFSEGSLHPFECAQS 848
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30321977 30339946 - CrPI670011_11g018660.1 Cre11g1866 513611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g1866 848 MobiDBLite consensus disorder prediction 665 690 - -
Cre11g1866 848 Gene3D - 699 824 IPR015943 GO:0005515(InterPro)
Cre11g1866 848 ProSiteProfiles Trp-Asp (WD) repeats profile. 146 177 IPR001680 GO:0005515(InterPro)
Cre11g1866 848 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 146 837 IPR045151 GO:0005737(PANTHER)|GO:0045717(PANTHER)|GO:0080008(PANTHER)
Cre11g1866 848 SUPERFAMILY WD40 repeat-like 143 781 IPR036322 GO:0005515(InterPro)
Cre11g1866 848 Coils Coil 562 589 - -
Cre11g1866 848 ProSitePatterns 14-3-3 proteins signature 2. 58 77 IPR023409 -
Cre11g1866 848 Gene3D - 135 424 IPR015943 GO:0005515(InterPro)
Cre11g1866 848 PRINTS 14-3-3 protein zeta signature 49 78 IPR000308 -
Cre11g1866 848 PRINTS 14-3-3 protein zeta signature 22 48 IPR000308 -
Cre11g1866 848 SMART 1433_4 1 89 IPR023410 -
Cre11g1866 848 Pfam 14-3-3 protein 2 76 IPR023410 -
Cre11g1866 848 FunFam Transducin family protein / WD-40 repeat family protein 651 825 - -
Cre11g1866 848 Gene3D - 1 84 IPR036815 -
Cre11g1866 848 SMART WD40_4 697 740 IPR001680 GO:0005515(InterPro)
Cre11g1866 848 SMART WD40_4 226 266 IPR001680 GO:0005515(InterPro)
Cre11g1866 848 SMART WD40_4 132 168 IPR001680 GO:0005515(InterPro)
Cre11g1866 848 SMART WD40_4 743 782 IPR001680 GO:0005515(InterPro)
Cre11g1866 848 SMART WD40_4 294 334 IPR001680 GO:0005515(InterPro)
Cre11g1866 848 SMART WD40_4 171 213 IPR001680 GO:0005515(InterPro)
Cre11g1866 848 Pfam WD domain, G-beta repeat 745 781 IPR001680 GO:0005515(InterPro)
Cre11g1866 848 Pfam WD domain, G-beta repeat 144 168 IPR001680 GO:0005515(InterPro)
Cre11g1866 848 SUPERFAMILY 14-3-3 protein 2 79 IPR036815 -
Cre11g1866 848 Gene3D Tetratricopeptide repeat domain 444 592 IPR011990 GO:0005515(InterPro)
Cre11g1866 848 ProSiteProfiles Trp-Asp (WD) repeats profile. 750 781 IPR001680 GO:0005515(InterPro)
Cre11g1866 848 MobiDBLite consensus disorder prediction 613 632 - -
Cre11g1866 848 SUPERFAMILY TPR-like 449 568 IPR011990 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2385 Cre-Chr2:37278792 Cre11g1866 Cre-Chr11:30321977 6.30E-18 dispersed
Cre11g1846 Cre-Chr11:30105296 Cre11g1866 Cre-Chr11:30321977 1.10E-35 dispersed
Cre11g1866 Cre-Chr11:30321977 Cre02g0742 Cre-Chr2:4264971 2.30E-18 dispersed
Cre11g1866 Cre-Chr11:30321977 Cre08g1124 Cre-Chr8:24432630 2.80E-37 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g1866 K11807 - csv:101206836 1350.88