Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g1883 ATGCCGCATAGAACGACTTACTTCTTCCCCAGGCAATTTCCGGATCGCGGATTTGACTCGGCGTCAACCTCCAAACACATTTTGGATCACGAGAAGAAAATCAACAAAGACACTTTTAGTACCGAAAGCGACGCGAAACCGACTCCGAGGCCAGCGCGCGACTTTAGCGTCACGAAGAGTTCGGCTGTATCGGATCTTTTCACGGGGGACAAGGCTCAAAGCAACAAGAAACTGCCTGCTTTTTACGATTGGTTGGTGGACAAGAAAGCAACGCGATCGGCATCAGCTCACGTGAAAACTTGGCTTTCCAACTGCGACGAGGACCGCGAGCTTTTGCTTCCGCCACCTACCTCGGAGCCGGAGCATGATACATCGTCGGTTAAGGATCGGAGTGTTGACCGGAACTTTGACCGGCAAGTTTCACTGCCTAGAGTATCAAGCGAGAGTAGCTATGCGGGGAGTTTGTTTTCAGGCACGGGAACGGGGACAGTGGATGGAAACTTTTCCAGCGACGTCAAGGATTCATCGGCGTCAAAGATATTATCCTCGCACCCTGCGAGGCCGGAAGAGATTGAGGCTGTAGATGGTAAGGAAAGCATAGCACAGAGAGCGAAAGAGAGTTATTACCTGCAACTTGCTTTGGCTGCATCGCTTCGTTCCCATGCTAGTCTGGCTGGCGATCCTGTGCTCATGGAGGAATGCAGGATGGAAATTACGGACGCTGAAACTGTTTCTTATCGACTTTGGGTAAGTGGTTGCCTGTCCTACTCCGACAAAATATCAGATGGTTTCTACAATATTCTGGGTATGAACCCGTATCTCTGGGTTATGTGCAATGGTTTTGAGGAAGGTAGACGGCTACCTCCTCTGATGTCGCTTAGAACCATTGAACCAAGTGAGACGTCAATGGAGGTAATTCTTGTGGATAGACATGGGGACTCTCGACTGAAAGAGCTTGAAGACAAGGCACAGGAACTATATTGTGCTTCAGAGAGCACCTTAGTGTTGGTGGAGAAACTAGGAAAGCTTGTTGCGATTTACATGGGGGGCACTTTTCCGGTGGAGCAAGGGGGGTTGCACCTACATTGGAAAGTGGTGAGCAAAAGATTGAGGGAATTCCAGAAATGCATTGTCCTTCCAATTGGTAGTCTTTCTATGGGACTATGCAGGCACCGTGCAATCCTTTTCAAGAAATTGGCAGATTACATAGGTTTGCCATGTCGGATAGCTAGAGGTTGCAAGTACTGTGTTGCAGATCATCGATCCTCTTGCCTTGTCAAAATTGAAGATGACAAGAAATCGTTGAGGGAATATGTAGTTGATTTAGTGGGGGAACCGGGAAATATACATGGTCCAGATTCCTCAATTAATGGAGGGTTCCAATCGTCAATGCCTTCACCGCTCCACATTTCTCATTTAAAAGAGTTTCAAGAACCTTACGTGGAAAGTTATTTCAATCATCAAACTGTTGGGTCAAAGCAAATCTGTGGATTTCCTGAAAATCCTCTACGTTCAGGTTATGGAGAGTACCAGATGAAAGGGGGAAGCACTTTACATAGGAGTTCAGGGGCTGAAACTGATAAATTGGTTGATCAAGCTTTTATGGGTATGAGATCAACTCAGTTGTGTGTGGAGACAAAATTGAGCAAGGAGTGTGTGCTTCAGAGTCATATAATGCCATCCACTGGTGCTGATGCCTCCGAGGTGTTGAGTTCTGTTGGCAGTGAATCTTTACGTGAAAACAAAGTTGTCATTGAAGAAATATATCAAGAAGAGGCGGTTGTGGCGGGGATTTCACTGAATGAAACTAGCATTAATCCATCCAAATTAAGCTTGTCAACTCAAACTGATTCAAAGGAGGTTCAGGGTAGGTCTCAAAATTGTTCAGCATCATCATATCCGAAATATCTGACGCTCGAACCGTCACTTGCAATGGATTGGCTGGAAATTTCATGGGATGAACTACATATAAAGGAGCGTGTCGGAGCTGGCTCCTTTGGTACAGTGCACCGTGCTGAATGGCATGGATCGGATGTTGCTGTCAAGGTTCTAACCGTGCAGGATTTCCATGATGATCAGTTGAAAGAGTTTCTAAGAGAGGTTGCAATAATGAAGCGGGTGCGCCATCCGAATGTGGTACTCTTTATGGGTGCAGTTACAAAGCGACCTCATCTTTCAATAGTGACTGAATATCTGCCCAGGGGTAGTCTATACCGCCTAATCCACAGGCCATCTTCTGGTGAATTGATGGATCAAAGGAAACGATTGCGCATGGCATTGGATGTGGCAAAGGGAATCAACTACCTACATTGTCTCAATCCTCCTATAGTACACTGGGATCTTAAATCCCCTAACTTGTTGGTTGACAAAAATTGGACGGTGAAGGTTTGTGATTTTGGGTTGTCCAGATTCAAAGCAAACACTTTCATATCATCGAAATCTGTTGCTGGAACGCCTGAGTGGATGGCTCCGGAATTCCTTCGTGGAGAGCCCTCAAATGAGAAGTCTGATGTCTACAGTTTTGGAGTGATCCTCTGGGAACTAGTAACCATGCAACAACCATGGAGTGGGCTCGGCCCGGCTCAGGTTGTGGGAGCTGTCGCTTTCCAGAATAGAAAGCTTTCTATCCCACCAAGTACTTCTCCGTTGTTGGCTTCCCTTATTGAATCTTGCTGGGCAGATGATCCTGTTCAGCGCCCATCCTTCACAAGCATCGTCGAGTCCCTAAAGAAATTGCTGAAATCTCCACAGCATTCCAAAATTACTAGGAACGTATTTTTACTCCTAACCGCACTGTTCCACTACCAGGCCTGTAATCTGTATGAACCCACCGAAGAATGCTCTCTTCTCTCAAGTGAACTTGTCCCTGCCAAGCAATTTTATGATTGGCAAATCAACAACCTGGATCTGCCTCCTTTCTTCGAAAACTGGAGCAAAGAATCTGCGTCGATGACTTTAGCGGAAGAACTGATGAGGTCTTACGAACGTCAAGGAAACAAAAATTCATTTCCTCGTGTTTCTTTATCAACAGAGTCCCCTTTCCAACTTGGGCTATTTGATTCTCCTTTAGTTGCAGGATGTGAAATACTGTAA 3093 46.01 MPHRTTYFFPRQFPDRGFDSASTSKHILDHEKKINKDTFSTESDAKPTPRPARDFSVTKSSAVSDLFTGDKAQSNKKLPAFYDWLVDKKATRSASAHVKTWLSNCDEDRELLLPPPTSEPEHDTSSVKDRSVDRNFDRQVSLPRVSSESSYAGSLFSGTGTGTVDGNFSSDVKDSSASKILSSHPARPEEIEAVDGKESIAQRAKESYYLQLALAASLRSHASLAGDPVLMEECRMEITDAETVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNGFEEGRRLPPLMSLRTIEPSETSMEVILVDRHGDSRLKELEDKAQELYCASESTLVLVEKLGKLVAIYMGGTFPVEQGGLHLHWKVVSKRLREFQKCIVLPIGSLSMGLCRHRAILFKKLADYIGLPCRIARGCKYCVADHRSSCLVKIEDDKKSLREYVVDLVGEPGNIHGPDSSINGGFQSSMPSPLHISHLKEFQEPYVESYFNHQTVGSKQICGFPENPLRSGYGEYQMKGGSTLHRSSGAETDKLVDQAFMGMRSTQLCVETKLSKECVLQSHIMPSTGADASEVLSSVGSESLRENKVVIEEIYQEEAVVAGISLNETSINPSKLSLSTQTDSKEVQGRSQNCSASSYPKYLTLEPSLAMDWLEISWDELHIKERVGAGSFGTVHRAEWHGSDVAVKVLTVQDFHDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPSSGELMDQRKRLRMALDVAKGINYLHCLNPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWSGLGPAQVVGAVAFQNRKLSIPPSTSPLLASLIESCWADDPVQRPSFTSIVESLKKLLKSPQHSKITRNVFLLLTALFHYQACNLYEPTEECSLLSSELVPAKQFYDWQINNLDLPPFFENWSKESASMTLAEELMRSYERQGNKNSFPRVSLSTESPFQLGLFDSPLVAGCEIL 1030
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30496870 30506247 - CrPI670011_11g018830.1 Cre11g1883 513628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g1883 1030 PANTHER SERINE-THREONINE PROTEIN KINASE 218 913 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cre11g1883 1030 MobiDBLite consensus disorder prediction 27 57 - -
Cre11g1883 1030 CDD STKc_MAP3K-like 661 909 - -
Cre11g1883 1030 SMART serkin_6 655 913 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g1883 1030 Pfam Protein tyrosine and serine/threonine kinase 655 909 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g1883 1030 Pfam Ethylene-responsive protein kinase Le-CTR1 241 449 - -
Cre11g1883 1030 Gene3D Phosphorylase Kinase; domain 1 648 732 - -
Cre11g1883 1030 Gene3D Transferase(Phosphotransferase) domain 1 734 923 - -
Cre11g1883 1030 MobiDBLite consensus disorder prediction 109 137 - -
Cre11g1883 1030 ProSiteProfiles Protein kinase domain profile. 655 921 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g1883 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 776 788 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g1883 1030 SUPERFAMILY Protein kinase-like (PK-like) 627 908 IPR011009 -
Cre11g1883 1030 MobiDBLite consensus disorder prediction 109 145 - -
Cre11g1883 1030 PRINTS Tyrosine kinase catalytic domain signature 729 742 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g1883 1030 PRINTS Tyrosine kinase catalytic domain signature 770 788 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g1883 1030 PRINTS Tyrosine kinase catalytic domain signature 836 858 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g1883 1030 PRINTS Tyrosine kinase catalytic domain signature 880 902 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g1883 1030 FunFam Serine/threonine-protein kinase CTR1 734 919 - -
Cre11g1883 1030 ProSitePatterns Protein kinases ATP-binding region signature. 661 682 IPR017441 GO:0005524(InterPro)
Cre11g1883 1030 FunFam Serine/threonine-protein kinase isoform 1 645 733 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0716 Cre-Chr3:6040361 Cre11g1883 Cre-Chr11:30496870 1.80E-49 dispersed
Cre05g1949 Cre-Chr5:31636477 Cre11g1883 Cre-Chr11:30496870 4.30E-114 dispersed
Cre06g1214 Cre-Chr6:6022326 Cre11g1883 Cre-Chr11:30496870 3.90E-89 dispersed
Cre09g1453 Cre-Chr9:27746350 Cre11g1883 Cre-Chr11:30496870 2.60E-40 dispersed
Cre10g2049 Cre-Chr10:35190531 Cre11g1883 Cre-Chr11:30496870 3.80E-174 dispersed
Cre11g1679 Cre-Chr11:28162684 Cre11g1883 Cre-Chr11:30496870 1.50E-47 dispersed
Cre11g1883 Cre-Chr11:30496870 Cre08g1301 Cre-Chr8:26089121 1.80E-33 dispersed
Cre11g1883 Cre-Chr11:30496870 Cre04g1072 Cre-Chr4:29424234 1.00E-174 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64567 PF07714 PK_Tyr_Ser-Thr 7.10E-64 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g1883 - - - 0.0