Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre11g1883 | ATGCCGCATAGAACGACTTACTTCTTCCCCAGGCAATTTCCGGATCGCGGATTTGACTCGGCGTCAACCTCCAAACACATTTTGGATCACGAGAAGAAAATCAACAAAGACACTTTTAGTACCGAAAGCGACGCGAAACCGACTCCGAGGCCAGCGCGCGACTTTAGCGTCACGAAGAGTTCGGCTGTATCGGATCTTTTCACGGGGGACAAGGCTCAAAGCAACAAGAAACTGCCTGCTTTTTACGATTGGTTGGTGGACAAGAAAGCAACGCGATCGGCATCAGCTCACGTGAAAACTTGGCTTTCCAACTGCGACGAGGACCGCGAGCTTTTGCTTCCGCCACCTACCTCGGAGCCGGAGCATGATACATCGTCGGTTAAGGATCGGAGTGTTGACCGGAACTTTGACCGGCAAGTTTCACTGCCTAGAGTATCAAGCGAGAGTAGCTATGCGGGGAGTTTGTTTTCAGGCACGGGAACGGGGACAGTGGATGGAAACTTTTCCAGCGACGTCAAGGATTCATCGGCGTCAAAGATATTATCCTCGCACCCTGCGAGGCCGGAAGAGATTGAGGCTGTAGATGGTAAGGAAAGCATAGCACAGAGAGCGAAAGAGAGTTATTACCTGCAACTTGCTTTGGCTGCATCGCTTCGTTCCCATGCTAGTCTGGCTGGCGATCCTGTGCTCATGGAGGAATGCAGGATGGAAATTACGGACGCTGAAACTGTTTCTTATCGACTTTGGGTAAGTGGTTGCCTGTCCTACTCCGACAAAATATCAGATGGTTTCTACAATATTCTGGGTATGAACCCGTATCTCTGGGTTATGTGCAATGGTTTTGAGGAAGGTAGACGGCTACCTCCTCTGATGTCGCTTAGAACCATTGAACCAAGTGAGACGTCAATGGAGGTAATTCTTGTGGATAGACATGGGGACTCTCGACTGAAAGAGCTTGAAGACAAGGCACAGGAACTATATTGTGCTTCAGAGAGCACCTTAGTGTTGGTGGAGAAACTAGGAAAGCTTGTTGCGATTTACATGGGGGGCACTTTTCCGGTGGAGCAAGGGGGGTTGCACCTACATTGGAAAGTGGTGAGCAAAAGATTGAGGGAATTCCAGAAATGCATTGTCCTTCCAATTGGTAGTCTTTCTATGGGACTATGCAGGCACCGTGCAATCCTTTTCAAGAAATTGGCAGATTACATAGGTTTGCCATGTCGGATAGCTAGAGGTTGCAAGTACTGTGTTGCAGATCATCGATCCTCTTGCCTTGTCAAAATTGAAGATGACAAGAAATCGTTGAGGGAATATGTAGTTGATTTAGTGGGGGAACCGGGAAATATACATGGTCCAGATTCCTCAATTAATGGAGGGTTCCAATCGTCAATGCCTTCACCGCTCCACATTTCTCATTTAAAAGAGTTTCAAGAACCTTACGTGGAAAGTTATTTCAATCATCAAACTGTTGGGTCAAAGCAAATCTGTGGATTTCCTGAAAATCCTCTACGTTCAGGTTATGGAGAGTACCAGATGAAAGGGGGAAGCACTTTACATAGGAGTTCAGGGGCTGAAACTGATAAATTGGTTGATCAAGCTTTTATGGGTATGAGATCAACTCAGTTGTGTGTGGAGACAAAATTGAGCAAGGAGTGTGTGCTTCAGAGTCATATAATGCCATCCACTGGTGCTGATGCCTCCGAGGTGTTGAGTTCTGTTGGCAGTGAATCTTTACGTGAAAACAAAGTTGTCATTGAAGAAATATATCAAGAAGAGGCGGTTGTGGCGGGGATTTCACTGAATGAAACTAGCATTAATCCATCCAAATTAAGCTTGTCAACTCAAACTGATTCAAAGGAGGTTCAGGGTAGGTCTCAAAATTGTTCAGCATCATCATATCCGAAATATCTGACGCTCGAACCGTCACTTGCAATGGATTGGCTGGAAATTTCATGGGATGAACTACATATAAAGGAGCGTGTCGGAGCTGGCTCCTTTGGTACAGTGCACCGTGCTGAATGGCATGGATCGGATGTTGCTGTCAAGGTTCTAACCGTGCAGGATTTCCATGATGATCAGTTGAAAGAGTTTCTAAGAGAGGTTGCAATAATGAAGCGGGTGCGCCATCCGAATGTGGTACTCTTTATGGGTGCAGTTACAAAGCGACCTCATCTTTCAATAGTGACTGAATATCTGCCCAGGGGTAGTCTATACCGCCTAATCCACAGGCCATCTTCTGGTGAATTGATGGATCAAAGGAAACGATTGCGCATGGCATTGGATGTGGCAAAGGGAATCAACTACCTACATTGTCTCAATCCTCCTATAGTACACTGGGATCTTAAATCCCCTAACTTGTTGGTTGACAAAAATTGGACGGTGAAGGTTTGTGATTTTGGGTTGTCCAGATTCAAAGCAAACACTTTCATATCATCGAAATCTGTTGCTGGAACGCCTGAGTGGATGGCTCCGGAATTCCTTCGTGGAGAGCCCTCAAATGAGAAGTCTGATGTCTACAGTTTTGGAGTGATCCTCTGGGAACTAGTAACCATGCAACAACCATGGAGTGGGCTCGGCCCGGCTCAGGTTGTGGGAGCTGTCGCTTTCCAGAATAGAAAGCTTTCTATCCCACCAAGTACTTCTCCGTTGTTGGCTTCCCTTATTGAATCTTGCTGGGCAGATGATCCTGTTCAGCGCCCATCCTTCACAAGCATCGTCGAGTCCCTAAAGAAATTGCTGAAATCTCCACAGCATTCCAAAATTACTAGGAACGTATTTTTACTCCTAACCGCACTGTTCCACTACCAGGCCTGTAATCTGTATGAACCCACCGAAGAATGCTCTCTTCTCTCAAGTGAACTTGTCCCTGCCAAGCAATTTTATGATTGGCAAATCAACAACCTGGATCTGCCTCCTTTCTTCGAAAACTGGAGCAAAGAATCTGCGTCGATGACTTTAGCGGAAGAACTGATGAGGTCTTACGAACGTCAAGGAAACAAAAATTCATTTCCTCGTGTTTCTTTATCAACAGAGTCCCCTTTCCAACTTGGGCTATTTGATTCTCCTTTAGTTGCAGGATGTGAAATACTGTAA | 3093 | 46.01 | MPHRTTYFFPRQFPDRGFDSASTSKHILDHEKKINKDTFSTESDAKPTPRPARDFSVTKSSAVSDLFTGDKAQSNKKLPAFYDWLVDKKATRSASAHVKTWLSNCDEDRELLLPPPTSEPEHDTSSVKDRSVDRNFDRQVSLPRVSSESSYAGSLFSGTGTGTVDGNFSSDVKDSSASKILSSHPARPEEIEAVDGKESIAQRAKESYYLQLALAASLRSHASLAGDPVLMEECRMEITDAETVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNGFEEGRRLPPLMSLRTIEPSETSMEVILVDRHGDSRLKELEDKAQELYCASESTLVLVEKLGKLVAIYMGGTFPVEQGGLHLHWKVVSKRLREFQKCIVLPIGSLSMGLCRHRAILFKKLADYIGLPCRIARGCKYCVADHRSSCLVKIEDDKKSLREYVVDLVGEPGNIHGPDSSINGGFQSSMPSPLHISHLKEFQEPYVESYFNHQTVGSKQICGFPENPLRSGYGEYQMKGGSTLHRSSGAETDKLVDQAFMGMRSTQLCVETKLSKECVLQSHIMPSTGADASEVLSSVGSESLRENKVVIEEIYQEEAVVAGISLNETSINPSKLSLSTQTDSKEVQGRSQNCSASSYPKYLTLEPSLAMDWLEISWDELHIKERVGAGSFGTVHRAEWHGSDVAVKVLTVQDFHDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPSSGELMDQRKRLRMALDVAKGINYLHCLNPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWSGLGPAQVVGAVAFQNRKLSIPPSTSPLLASLIESCWADDPVQRPSFTSIVESLKKLLKSPQHSKITRNVFLLLTALFHYQACNLYEPTEECSLLSSELVPAKQFYDWQINNLDLPPFFENWSKESASMTLAEELMRSYERQGNKNSFPRVSLSTESPFQLGLFDSPLVAGCEIL | 1030 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 30496870 | 30506247 | - | CrPI670011_11g018830.1 | Cre11g1883 | 513628 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre11g1883 | 1030 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 218 | 913 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Cre11g1883 | 1030 | MobiDBLite | consensus disorder prediction | 27 | 57 | - | - | |
Cre11g1883 | 1030 | CDD | STKc_MAP3K-like | 661 | 909 | - | - | |
Cre11g1883 | 1030 | SMART | serkin_6 | 655 | 913 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre11g1883 | 1030 | Pfam | Protein tyrosine and serine/threonine kinase | 655 | 909 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre11g1883 | 1030 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 241 | 449 | - | - | |
Cre11g1883 | 1030 | Gene3D | Phosphorylase Kinase; domain 1 | 648 | 732 | - | - | |
Cre11g1883 | 1030 | Gene3D | Transferase(Phosphotransferase) domain 1 | 734 | 923 | - | - | |
Cre11g1883 | 1030 | MobiDBLite | consensus disorder prediction | 109 | 137 | - | - | |
Cre11g1883 | 1030 | ProSiteProfiles | Protein kinase domain profile. | 655 | 921 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre11g1883 | 1030 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 776 | 788 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre11g1883 | 1030 | SUPERFAMILY | Protein kinase-like (PK-like) | 627 | 908 | IPR011009 | - | |
Cre11g1883 | 1030 | MobiDBLite | consensus disorder prediction | 109 | 145 | - | - | |
Cre11g1883 | 1030 | PRINTS | Tyrosine kinase catalytic domain signature | 729 | 742 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre11g1883 | 1030 | PRINTS | Tyrosine kinase catalytic domain signature | 770 | 788 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre11g1883 | 1030 | PRINTS | Tyrosine kinase catalytic domain signature | 836 | 858 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre11g1883 | 1030 | PRINTS | Tyrosine kinase catalytic domain signature | 880 | 902 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre11g1883 | 1030 | FunFam | Serine/threonine-protein kinase CTR1 | 734 | 919 | - | - | |
Cre11g1883 | 1030 | ProSitePatterns | Protein kinases ATP-binding region signature. | 661 | 682 | IPR017441 | GO:0005524(InterPro) | |
Cre11g1883 | 1030 | FunFam | Serine/threonine-protein kinase isoform 1 | 645 | 733 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre03g0716 | Cre-Chr3:6040361 | Cre11g1883 | Cre-Chr11:30496870 | 1.80E-49 | dispersed | |
Cre05g1949 | Cre-Chr5:31636477 | Cre11g1883 | Cre-Chr11:30496870 | 4.30E-114 | dispersed | |
Cre06g1214 | Cre-Chr6:6022326 | Cre11g1883 | Cre-Chr11:30496870 | 3.90E-89 | dispersed | |
Cre09g1453 | Cre-Chr9:27746350 | Cre11g1883 | Cre-Chr11:30496870 | 2.60E-40 | dispersed | |
Cre10g2049 | Cre-Chr10:35190531 | Cre11g1883 | Cre-Chr11:30496870 | 3.80E-174 | dispersed | |
Cre11g1679 | Cre-Chr11:28162684 | Cre11g1883 | Cre-Chr11:30496870 | 1.50E-47 | dispersed | |
Cre11g1883 | Cre-Chr11:30496870 | Cre08g1301 | Cre-Chr8:26089121 | 1.80E-33 | dispersed | |
Cre11g1883 | Cre-Chr11:30496870 | Cre04g1072 | Cre-Chr4:29424234 | 1.00E-174 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64567 | PF07714 | PK_Tyr_Ser-Thr | 7.10E-64 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre11g1883 | - | - | - | 0.0 |