Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g1981 ATGGGAGCTGAATCAGGGCTTGCAATGTTTTGTGGAATAATTCATAAAATAAAACCCTACTTAGCTATGATTTCCTTGCAATTTGGATATGCAGGGATGTATATTGTCACGATGCTTTGTCTTAAGAAGGGCATGAACCATTACGTTCTCGCCGTTTATCGACACGTCGTTGCCACCATTGTCATCTCTCCCTTCGCCATCGTCCTCGAAAGAAAAATAAGGCCAAAGATGACATTCCCAATCTTTGCAAGAATATTGCTCCTCGGGTTTCTCGAGCCAGTGTTGGATCAAAATCTATACTATGTGGGTTTGAAACTTACTTCAGCAACATTCACTTCTGTCACCATCAATATTCTCCCTGCAGTAACCTTCATTATGGCTCTCATTTTCAGGCTAGAAAGTGTGAATATGAAGAAGATTCGTAGCATCGCGAAGGTGGTAGGAACATTGGTGACAATCGGCGGAGCAATGGTGATGACTCTATACAAAGGACCAATCGTCGACATATTCCACGGCCATGGACGCCACGCCGCCCACCACAGTACTGAGTCCGCCGACCAGCACTGGGTCCTCGGAACCCTCATGCTTCTCGGCAGCATCGTCGGCTGGTCCGGTTTCTTCATCTTGCAATCCTTCACACTGAGGAAATACCCGGCGGAGCTGTCGTTGACCGCCCTGATATGCGTGGCCGGCACGGTGGAGGGCTCCATTGTGACGCTTATTATGGAGCGTGACTTTAGCGTGTGGGCCATTGGCTGGGACTCTCGCCTTCTTGCCGCTGTTTATACCGGTGTGATATGCTCTGGACTTGCATATTACATACAAGGAGTGGTGATTCGGGAACGTGGCCCAGTTTTTGTTACCTCTTTTACCCCTCTCTGCATGATTATTACCGCCTTCCTTGGCTCCATTGTTTTGGCTGAGCAAATTCACCTTGGAAGCATAATCGGAGCTATTTTCATAGTGATGGGGCTATACTTAGTGGTGTGGGGCAAAGCCAAGGACCATCTAAACAAATTGACGAATCAAAAAAGCGGCGCCACCACCACCGAATTACCGATCACCGCCGAGCCGGAAACCACAGCCACCGCCGAGCGTTGTTCTTCCAAGGCTCCACCGGCGTGA 1125 48.98 MGAESGLAMFCGIIHKIKPYLAMISLQFGYAGMYIVTMLCLKKGMNHYVLAVYRHVVATIVISPFAIVLERKIRPKMTFPIFARILLLGFLEPVLDQNLYYVGLKLTSATFTSVTINILPAVTFIMALIFRLESVNMKKIRSIAKVVGTLVTIGGAMVMTLYKGPIVDIFHGHGRHAAHHSTESADQHWVLGTLMLLGSIVGWSGFFILQSFTLRKYPAELSLTALICVAGTVEGSIVTLIMERDFSVWAIGWDSRLLAAVYTGVICSGLAYYIQGVVIRERGPVFVTSFTPLCMIITAFLGSIVLAEQIHLGSIIGAIFIVMGLYLVVWGKAKDHLNKLTNQKSGATTTELPITAEPETTATAERCSSKAPPA 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 31568705 31571640 + CrPI670011_11g019810.1 Cre11g1981 513726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g1981 374 MobiDBLite consensus disorder prediction 349 374 - -
Cre11g1981 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 333 - -
Cre11g1981 374 PANTHER WAT1-RELATED PROTEIN 21 342 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cre11g1981 374 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020(InterPro)
Cre11g1981 374 Pfam EamA-like transporter family 23 148 IPR000620 GO:0016020(InterPro)
Cre11g1981 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 162 - -
Cre11g1981 374 MobiDBLite consensus disorder prediction 349 367 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g0671 Cre-Chr7:4455874 Cre11g1981 Cre-Chr11:31568705 1.90E-83 dispersed
Cre07g0673 Cre-Chr7:4486908 Cre11g1981 Cre-Chr11:31568705 1.10E-92 dispersed
Cre11g1698 Cre-Chr11:28505379 Cre11g1981 Cre-Chr11:31568705 1.70E-55 dispersed
Cre11g1981 Cre-Chr11:31568705 Cre11g2016 Cre-Chr11:31933258 1.50E-35 dispersed
Cre02g1796 Cre-Chr2:31274294 Cre11g1981 Cre-Chr11:31568705 1.50E-59 transposed
Cre04g0633 Cre-Chr4:23822504 Cre11g1981 Cre-Chr11:31568705 2.90E-99 transposed
Cre06g1647 Cre-Chr6:12927282 Cre11g1981 Cre-Chr11:31568705 6.30E-69 transposed
Cre06g1858 Cre-Chr6:24434787 Cre11g1981 Cre-Chr11:31568705 5.50E-57 transposed
Cre11g1745 Cre-Chr11:29068755 Cre11g1981 Cre-Chr11:31568705 1.40E-93 transposed
Cre11g1981 Cre-Chr11:31568705 Cre08g0513 Cre-Chr8:17683883 2.80E-106 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g1981 - - - 0.0