Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g1995 ATGGCGGAGATAACGGTGTTCGACGGAGAAGCGGCGGAGAGAGTGGTGGCGGAGCTGAGGGAGAGCTATAATTCCGGCAAAACGCGAAGCTACGAATGGAGAGTGAATCAATTGAAGAATCTGTTGAAATTGGTTTGTGAAAACGAAGAAGAGATGGTTCAAACCGTTCATTCCGATCTTTATAAACCCGAATTTGAAGCCTTCGCTCATGAGATAGCTCTATTAAAAGGTTCGTGTAAATTGGCACTTAAAGAACTCAGGCGTTGGATGGCACCAGAAAAGGTTAAAACTTCAATTACCACATTTCCTTCGTCTGGAGCAATTGTTCCAGAACCTTTCGGTGTCGTCCTTATCATTTCTGCTTGGAATTATCCATTCTTGTTATCTCTCGATCCAGTTGTTGGAGCAATAGCAGCTGGCAATGCTGTGGTTCTAAAGCCATCAGAAATTTCCCCAAGAACATCATCTTTGATGGCAAAACTTTTGGCGAAATATTTGGATACATCTGCTGTAAAAGTTGTTGAGGGTGCTGTTCCCGAAACTAATGCTTTGCTGGAGCAGAAGTGGGACAAAATATTTTACACAGGCAATGGAAGAGTGGGGCGGATAGTGATGGCAGCTGCTGCCAAGCATCTTACGCCAGTTGTTTTAGAGCTTGGAGGAAAATCTCCAGTAGTAGTTGATTCAGAAATCAATTTACAAGTTGCGAGTAGGCGGATTATAGCTGGCAAGTGGGGTTGTAACAATGGACAAGCATGCATTGCTCCTGATTATATCATAACACCGAAAGAATTTGCTCCAAAATTGGTGGAGTCTCTTAAACAAGAACTGGAGAGATTTTATGGAAAGAATCCGTTGGAAACTAAAGATTTATCTCGCATTGTGAATGCTAAACACTTTGATCGCTTGACAAGGCTCTTAGATGATGATAAAGTTTCTGGCAAGATCGTGCATGGAGGTGAAAAGGACAAAACAAAGCTACAGATTGCTCCCACCCTCTTATTGGATGTCCCTCGAGACTCACTAATTATGACGGAGGAGATATTTGGTCCCCTACTTCCCATTCTCACGGTCGACAAGGTGGAGGACAGCTTCGAAATAGTGAACTCGGGCACAAAGCCACTTGCAGCATATTTATTTACTAGCAACAAGAAGCTCAAGGAACGATTCGTGGCTTGTATCTCTGCAGGGGGTGTGGCCATCAATGAAACCGCCTTACATCTGACGATTAGCACGTTACCGTTCGGAGGAGTTGGAGAGAGTGGAATGGGAGCTTACCATGGAAAGTTCTCCTTTGATGCATTTAGCCATAAGAAGGCCGTTCTTTATCGAAGTTTTGCAGGCGATGCGCCGATGAGATATCCGCCATACACAAAGGGAAAGCTCAGAATTCTCAAGGCTCTTCTTGGAGGTGGCATATTGGGACTCATTCGTGCTTTACTTGGTTGGTCATAA 1455 44.12 MAEITVFDGEAAERVVAELRESYNSGKTRSYEWRVNQLKNLLKLVCENEEEMVQTVHSDLYKPEFEAFAHEIALLKGSCKLALKELRRWMAPEKVKTSITTFPSSGAIVPEPFGVVLIISAWNYPFLLSLDPVVGAIAAGNAVVLKPSEISPRTSSLMAKLLAKYLDTSAVKVVEGAVPETNALLEQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSEINLQVASRRIIAGKWGCNNGQACIAPDYIITPKEFAPKLVESLKQELERFYGKNPLETKDLSRIVNAKHFDRLTRLLDDDKVSGKIVHGGEKDKTKLQIAPTLLLDVPRDSLIMTEEIFGPLLPILTVDKVEDSFEIVNSGTKPLAAYLFTSNKKLKERFVACISAGGVAINETALHLTISTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSFAGDAPMRYPPYTKGKLRILKALLGGGILGLIRALLGWS 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 31723262 31730311 + CrPI670011_11g019950.1 Cre11g1995 513740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g1995 484 PIRSF ALDH 2 474 IPR012394 GO:0006081(InterPro)
Cre11g1995 484 Pfam Aldehyde dehydrogenase family 2 441 IPR015590 GO:0016491(InterPro)
Cre11g1995 484 FunFam Aldehyde dehydrogenase 221 421 - -
Cre11g1995 484 PANTHER ALDEHYDE DEHYDROGENASE 11 482 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(InterPro)|GO:0006081(PANTHER)
Cre11g1995 484 SUPERFAMILY ALDH-like 13 457 IPR016161 GO:0016491(InterPro)
Cre11g1995 484 CDD ALDH_F3FHI 12 443 - -
Cre11g1995 484 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 221 421 IPR016163 GO:0016620(InterPro)
Cre11g1995 484 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 20 439 IPR016162 GO:0016491(InterPro)
Cre11g1995 484 FunFam Aldehyde dehydrogenase 20 224 - -
Cre11g1995 484 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 217 224 IPR029510 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1260 Cre-Chr7:26490044 Cre11g1995 Cre-Chr11:31723262 1.50E-134 dispersed
Cre11g1995 Cre-Chr11:31723262 Cre11g1996 Cre-Chr11:31734088 9.00E-222 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g1995 K00128 - csv:101219329 870.537