Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g1996 ATGTCGGAAACGAAGGTGTTCGATGCGGCGGCGGCGACGGAGTTGGTGAAGGAACTGAGAGGTAGTTTTGGCTCCGGCAACACTCGGAGCTACGAGTGGAGAGTGGCGCAGCTTGAGAGTCTCTTGAAGCTCAGCGTTGACCATGAGGAAGATATTTGCGATGCGCTTCGCTCTGACCTCTCCAAGCCTGCGTTGGAATCCGTTATTCATGAGGTCTTCGTTCTTAAACTCAACTCCTTCATTGTTCTGATGCTCTGTCGTTTTCTCGTGTTTGACCTGTTATTTTGTTCGCTTTTGCTCTTTCTGTTGGTTGAATTAATGAACGCGGCACCTGTTTGTTTAAATCTCCAATCCTTTCGAATTCTTTTTGTCTTTCTCCTCCTTCAGTCTCAATCACATCCACCAAATATAGGTAGTGCCTCGCAGTTGCAGTTTGGTCGGGACCATGTGATCATTGAAGAGAACTTACTGATATCTATGGTAAAAAGTTCGTGTAAATTGGCACTTAAAGAACTCAGAAATTGGATGACACCAGAGAAGGTTCAAACTACAATTACCAGTTTTCCTTCGTCTGCTGCAATTGTACCAGAACCTTTGGGTGTTGTGCTGATCATCTCCGCTTGGAATTATCCATTCTATTTATCTCTTGATCCAGTTGTTGGAGCAATAGCAGCTGGTAATGCTGTGGTTCTAAAGCCATCAGAAATTTCTCCAGCAACAGCATCTTTAATAGCAAAACTTCTTGAGAAGTATTTGGATATGTCTGCTGTAAAAGTTGTTGAGGGTGCTATTCCCGAAACTAGTGCTTTGCTGGAGCAAAAGTGGGACAAAATATTTTACACAGGCAATGGAAGAGTGGGGCGAATAGTGATGGCAGCTGCTGCCAAGCACCTTACGCCAGTTGTTTTAGAGCTTGGAGGAAAATCTCCAGTAGTAGTTGATTCAAAAATCAATTTACAAGTTGCCTGTAGGCGGATTATATCTGGTAAATGGGGTGGTAACAATGGACAAGCATGTGTTTCTCCTGATTACATCATAACTACGAAAGAATTTGCTCCAAAATTGGTGGAGTCTCTGAAACAAGAACTGGAGAGATTTTATGGAAAGAATCCGTTGGAATCTAAAGATATATCTCGCATTGTGAATGCTAGCCACTTTAATCGCTTGACCAAGCTCTTAGATGATGATGAAGTTTCTAGCAAGATTGTTCATGGAGGTGAAAAGGACAAAACCAAATTACAGATTGCTCCCACCCTCTTATTGGATGTCCCTCGAGACTCTTTGATTATGACGGAGGAGATATTTGGTCCCTTGCTTCCCATTATCACGGTAGACAAATTGGAGGACAGCTTCGAAATAGTGAATTCGGGCTCAAAGCCACTTGCAGCATATTTATTTACCAACAACAAAAAGCTCAAGGAACAGTTCGTGGCTTGTATATCTGCAGGCGGCGTGGTTATCAATGACACCACCTTACATCTAGCTGTTAGCACACTACCATTTGGAGGAGTAGGGGAGAGTGGAATGGGATCTTGCCATGGGAAGTTTTCATTTGATGCATTTAGCCATAAGAAAGCTGTTCTTTATCGAAGTTTTGTAGGCGACGTGCCGATGCGATACCCACCTTACACAAAGGGAAAGCTTAGATTTCTCAAAGCTCTTCTTGGAGGTGGCATTATGGAGCTCATTCGTGCCCTTCTTGGTTGGTCGTAA 1713 43.37 MSETKVFDAAAATELVKELRGSFGSGNTRSYEWRVAQLESLLKLSVDHEEDICDALRSDLSKPALESVIHEVFVLKLNSFIVLMLCRFLVFDLLFCSLLLFLLVELMNAAPVCLNLQSFRILFVFLLLQSQSHPPNIGSASQLQFGRDHVIIEENLLISMVKSSCKLALKELRNWMTPEKVQTTITSFPSSAAIVPEPLGVVLIISAWNYPFYLSLDPVVGAIAAGNAVVLKPSEISPATASLIAKLLEKYLDMSAVKVVEGAIPETSALLEQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSKINLQVACRRIISGKWGGNNGQACVSPDYIITTKEFAPKLVESLKQELERFYGKNPLESKDISRIVNASHFNRLTKLLDDDEVSSKIVHGGEKDKTKLQIAPTLLLDVPRDSLIMTEEIFGPLLPIITVDKLEDSFEIVNSGSKPLAAYLFTNNKKLKEQFVACISAGGVVINDTTLHLAVSTLPFGGVGESGMGSCHGKFSFDAFSHKKAVLYRSFVGDVPMRYPPYTKGKLRFLKALLGGGIMELIRALLGWS 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 31734088 31739354 + CrPI670011_11g019960.1 Cre11g1996 513741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g1996 570 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 303 310 IPR029510 GO:0016491(InterPro)
Cre11g1996 570 FunFam Aldehyde dehydrogenase 307 507 - -
Cre11g1996 570 Pfam Aldehyde dehydrogenase family 166 527 IPR015590 GO:0016491(InterPro)
Cre11g1996 570 PANTHER ALDEHYDE DEHYDROGENASE 155 569 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(InterPro)|GO:0006081(PANTHER)
Cre11g1996 570 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 157 525 IPR016162 GO:0016491(InterPro)
Cre11g1996 570 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 307 507 IPR016163 GO:0016620(InterPro)
Cre11g1996 570 FunFam Aldehyde dehydrogenase 132 310 - -
Cre11g1996 570 SUPERFAMILY ALDH-like 161 543 IPR016161 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre09g0098 Cre-Chr9:1224496 Cre11g1996 Cre-Chr11:31734088 3.40E-14 dispersed
Cre11g1995 Cre-Chr11:31723262 Cre11g1996 Cre-Chr11:31734088 9.00E-222 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g1996 K00128 - csv:101219569 759.985