Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g2082 ATGATTATGGAGCAGTTAAGATACTGCCTCCTTCAAATCTTTGTTGCTTTAGCTATTTCATTTCTGGTTTCTGCACAGGATCAATCAGGATTCATTAGCATCGACTGTGGAATTTCAGAGAATTCAAGCTACAAAGATAGTGTAACAGACATAAAGTACATTTCTGATGTAAACTTCACACAAACTGGAATAAGTAAGAGCATATCATTAGATTTCAACACCACCACTCTTCCACAGCAGTTCTGGTATGTTAGAAGCTTTCCTGAAGGAGAGAGAAACTGTTACACCATAAAGCTTGCTCAGGGTAAAGGTTACAAGTATTTGATCAGAGCGAGTTTCATGTACGGAAACTATGATGGCCAAGGTACAGCGCCAGCTTTCGATCTGTACATGGGTGTTAATAAATGGGATTCAGTAATACTGCGCAATGAATCCAGCATCATAATCAAAGAAGTTATACATGTACTTCCTACATCTTCCATATACATTTGTCTGGTCAATACTGGCTTTGGATCACCTTTTATATCAGCATTGGAGCTTAGGCTTTTGAAAAATGCAAGTTATGTCACTGATTTTGATTTGCTAGCTCTCCACAGACGGTTGGACGTTGGTTCAATGACCAACAGAACCATCAGGTACAATGATGATTTTTCTGATAGGATCTGGATGCCCTATAACTTTCTTAACTATAAAATTATAAGTACTTCATCCACAGTTGATTCAGGAGGTAGCAATTCTTATAATCTACCAAGAATTGTCATGAGCACTGCCATCACAACCTATAATGCCAGTGATCCTCTAGAATTTCACTGGGTTCCTGAAGATCCCAGTACAAAATATCATATATTCTTGCACTTTGCTGATTTGGAAAAGCTCCAAGCTAACCAATTAAGGGAATTTAACATCTATCAAAATGGGAATTATCTTCATGGACCATTCTCTCCTGATTACTTGCAGTCAACTACATTGTCTAGCATATCCCCAATGAGTGGAGATGACATTGCATTTTCATTATCAAAAACTAATGCATCAAATCTTCCACCCATCCTCAATGCACTTGAAATCTACATCGTGCTTGACACATCGCAATCACGCACCGATGAACAGGACATTACAGCCCTGATGAACATCAAATCCTTTTATGGATTGAGAAAGAATTGGCAGGGTGATCCATGCCAGCCAAAATCCTTCTTGTGGCTTGGTCTTAATTGTAGCTATGATGACCAGAGTCCTAATAGAATCACCTCCTTGAACTTGTCTTCGAGCGGATTGGTGGGGGAAATAGCTACCTATGTGTCCGAGCTCACATCGTTACAATATTTGGATTTGTCAAACAATAGCTTGAGTGGACCGGTGCCCGGTTTTCTATCCAAATTGCAGTCCTTGAAAGTTTTAGACTTGAGGGACAATCCTCTCCTTGGTTCTATACCAAGTGAACTCATGGATAGATCGAAGAACGGATCCCTTTCAATAAGGGTTGGAGGAAACATGGATTTTTGTGCTTCATCTTCTTGTCAAAAGAAGAAAAAGAGTTACGTTATTACAATTGTAGCAATAGTTTCATCATTGTTTGTCCTCTTAGCTGCAGCAGCAGTATGGATAATATTATGGAGAAAACGAGCCCGAAAACAGCCTGTCATAAGACTCGGATCACTAGAGGAGAAAAAACAGCAGCTATCTTACTCTCGAATAAAGCGTATTACAAACAACTTTGAGAGAAAAATTGGAGAAGGAGGTTTTGCAAAAGTATTCCTCGGTTACTTGGATAATACTCAAGTCGCCGTGAAGGTTCTTAAGTCTTCGGTTCAAGGTTATAAAGAATTTGAAGCAGAGGTTAAACTTTTGTTGAGAATTCATCATCGAAACTTGACGAGCCTTATCGGATACTGCTGTGAAAAAACCAACCTGGTTCTAATTTATGAGTACATAAATAATGGCAACTTAAAAGAGCATCTATCAGGTGACAAAGTTGGTGTCCTCAGTTGGGAGGAAAGGATGCAAGTAGCAGTCAATGCAGCGCAAGGGTTGGAGTATCTGCATCATGGTTGTAAGCCACCAATTGTTCACAGAGATGTGAAGTCTGCAAACATCCTTTTGAATGACAGATTCCAAGCTAAAATAGCTGATTTTGGTCTATCCAAGAGTTTTCCGACCGAAAGCCGTACTCATTTGACAACTGTTGTTGCAGGGACCGATGGATATCTTGACCCCGAGTATTACGCAACTGGCTGGTTGACTGAGAAAAGCGATGTATATAGTTTTGGAGTTCTTATATTGGAAGTAGTCACTTCCCGTCCAGTCCTCATGATTGATAGAGCTTCTTCACAGAAATATCATATAAGCCAATGGGTAATGCACTTGATGAAAACAGGTGATATAAGGAGCATTGTTGATCAGAGGGTGAGGGAAAACTTCGACTTGAGTTCTGCTTGGAAGGCAGTGGAGATTGCTATGAAATGTTTGTCATTGAATTCCATTGATAGGCCAAACATGAAAGAGGTAGTTACGGTGTTGAGTGAGTGTTTGGCGTTAGAGAAAGCTCGAAAACGAAGAAACGTCGATTCTAATATGGGAAAATCAAATGCAGTTAGTAGGAATTTCAGAGAGAGCGAAGGAGGCTGCAAGCAACTCATGATGAACCAAGAAATAGCCCAAGTGGTTCAAGATGCTGTGAAGCAATGA 2682 39.93 MIMEQLRYCLLQIFVALAISFLVSAQDQSGFISIDCGISENSSYKDSVTDIKYISDVNFTQTGISKSISLDFNTTTLPQQFWYVRSFPEGERNCYTIKLAQGKGYKYLIRASFMYGNYDGQGTAPAFDLYMGVNKWDSVILRNESSIIIKEVIHVLPTSSIYICLVNTGFGSPFISALELRLLKNASYVTDFDLLALHRRLDVGSMTNRTIRYNDDFSDRIWMPYNFLNYKIISTSSTVDSGGSNSYNLPRIVMSTAITTYNASDPLEFHWVPEDPSTKYHIFLHFADLEKLQANQLREFNIYQNGNYLHGPFSPDYLQSTTLSSISPMSGDDIAFSLSKTNASNLPPILNALEIYIVLDTSQSRTDEQDITALMNIKSFYGLRKNWQGDPCQPKSFLWLGLNCSYDDQSPNRITSLNLSSSGLVGEIATYVSELTSLQYLDLSNNSLSGPVPGFLSKLQSLKVLDLRDNPLLGSIPSELMDRSKNGSLSIRVGGNMDFCASSSCQKKKKSYVITIVAIVSSLFVLLAAAAVWIILWRKRARKQPVIRLGSLEEKKQQLSYSRIKRITNNFERKIGEGGFAKVFLGYLDNTQVAVKVLKSSVQGYKEFEAEVKLLLRIHHRNLTSLIGYCCEKTNLVLIYEYINNGNLKEHLSGDKVGVLSWEERMQVAVNAAQGLEYLHHGCKPPIVHRDVKSANILLNDRFQAKIADFGLSKSFPTESRTHLTTVVAGTDGYLDPEYYATGWLTEKSDVYSFGVLILEVVTSRPVLMIDRASSQKYHISQWVMHLMKTGDIRSIVDQRVRENFDLSSAWKAVEIAMKCLSLNSIDRPNMKEVVTVLSECLALEKARKRRNVDSNMGKSNAVSRNFRESEGGCKQLMMNQEIAQVVQDAVKQ 893
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 32599665 32605147 + CrPI670011_11g020820.1 Cre11g2082 513827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g2082 893 FunFam Leucine-rich repeat receptor-like kinase 369 502 - -
Cre11g2082 893 PRINTS Leucine-rich repeat signature 459 472 - -
Cre11g2082 893 PRINTS Leucine-rich repeat signature 438 451 - -
Cre11g2082 893 ProSitePatterns Serine/Threonine protein kinases active-site signature. 687 699 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g2082 893 Gene3D Phosphorylase Kinase; domain 1 550 642 - -
Cre11g2082 893 ProSitePatterns Protein kinases ATP-binding region signature. 575 596 IPR017441 GO:0005524(InterPro)
Cre11g2082 893 ProSiteProfiles Protein kinase domain profile. 569 842 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g2082 893 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 643 851 - -
Cre11g2082 893 Pfam Leucine rich repeat 413 472 IPR001611 GO:0005515(InterPro)
Cre11g2082 893 SUPERFAMILY Protein kinase-like (PK-like) 554 838 IPR011009 -
Cre11g2082 893 Gene3D Ribonuclease Inhibitor 369 492 IPR032675 -
Cre11g2082 893 PANTHER OS07G0107800 PROTEIN-RELATED 24 847 - -
Cre11g2082 893 CDD STKc_IRAK 575 840 - -
Cre11g2082 893 SMART serkin_6 569 842 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g2082 893 Pfam Malectin-like domain 34 357 IPR024788 -
Cre11g2082 893 Gene3D Transferase(Phosphotransferase) domain 1 643 866 - -
Cre11g2082 893 SUPERFAMILY L domain-like 373 481 - -
Cre11g2082 893 Pfam Protein kinase domain 571 835 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1706 Cre-Chr7:32512141 Cre11g2082 Cre-Chr11:32599665 6.80E-40 dispersed
Cre07g1707 Cre-Chr7:32520858 Cre11g2082 Cre-Chr11:32599665 3.20E-201 dispersed
Cre07g1708 Cre-Chr7:32531429 Cre11g2082 Cre-Chr11:32599665 6.90E-169 dispersed
Cre09g0028 Cre-Chr9:600614 Cre11g2082 Cre-Chr11:32599665 6.70E-159 dispersed
Cre09g0032 Cre-Chr9:661677 Cre11g2082 Cre-Chr11:32599665 1.60E-189 dispersed
Cre09g0033 Cre-Chr9:667181 Cre11g2082 Cre-Chr11:32599665 4.20E-190 dispersed
Cre10g2173 Cre-Chr10:36272172 Cre11g2082 Cre-Chr11:32599665 1.70E-104 dispersed
Cre11g2082 Cre-Chr11:32599665 Cre06g0921 Cre-Chr6:2631998 7.00E-71 dispersed
Cre11g2082 Cre-Chr11:32599665 Cre02g2214 Cre-Chr2:35826417 2.50E-14 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64574 PF12819 Malectin_like 4.20E-110 CL0202 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g2082 - - - 0.0