Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g2094 ATGGCAATGGTGGATTTCAAGCTTCATCGTCTTCTTCTTTCCACCCTCTTTTTATTTCTTTTATTCATTCCTTCCGTGATCGCAGCAGAGGATTGTCAATGTCCCGAAGACACAGAGGAAGACACAGGGGAACGAAATGCAACTTTAGCTATGAAATACAAAGTCATCGCCATAGCTACGATTCTCGTTGCGGGAATCATTGGTGTGGTGATTCCTTTGCTTGGGAAGGTGATTCCGGCGTTAAGTCCGGAGAAGGATATTTTCTTTGTGATTAAAGCTTTTGCTGCTGGAGTTATATTAGCAACTGGATTTATTCATGTTCTTCCTGATGCTTATGAAAATCTTACGTCGTCGAAATTGAACGAGGATCCATGGGGGAAGTTTCCGTTCACTGGTTTAGTGGCTATGGTGGCGGCGATGGCTACTTTGATGGTGGATGCGGGTGCGAGCTCTTATTATACTCGGATTCATCTTAATAAAGCGCAGCCTGAGTTGATTGGAGATGATGAAATGCGGGGAGGCGGCGGTCGTGATGGTCATGTTCATGTTCATACTCATGCCACTCATGGACATGCTCATGGCTCCGCCGATGTCGTCGGTTCATCCACCGAGATTCTCCGCCACCGTGTCATTTCTCAGGTATTGGAGCTGGGGATAGTGGTACATTCGGTAATTATAGGAATTGGTTTGGGTGTTTCTGAAACTCCGAAAACAATAAGACCTCTTGTGGCCGCCATCACTTTTCATCAGTTATTTGAAGGCATGGGCCTCGGAGGATGCATCGCTCAGGCAAAATTCAAGAACAGGGCAACAATAATAATGGGGCTTTTCTTTTGCTTGACCACACCAATTGGGATAGCAATAGGCATTGGAGTAACAAAGACTTATGATGAAGATAGCCCAAAAGCACTTATAGTGGAAGGAATTTTGAATGCGGCTTCTTCGGGTATCTTAATCTATATGGCTCTTGTAGATCTTCTTGCTGCTGATTTTATGAACCCCAGAATGCAAAGCAATGGGAAACTTCAACTTTTTGCTAACCTTTCTCTTATTCTTGGAGCTGCCTTGATGTCCTTGCTTGCTATATGGGCATAG 1095 44.47 MAMVDFKLHRLLLSTLFLFLLFIPSVIAAEDCQCPEDTEEDTGERNATLAMKYKVIAIATILVAGIIGVVIPLLGKVIPALSPEKDIFFVIKAFAAGVILATGFIHVLPDAYENLTSSKLNEDPWGKFPFTGLVAMVAAMATLMVDAGASSYYTRIHLNKAQPELIGDDEMRGGGGRDGHVHVHTHATHGHAHGSADVVGSSTEILRHRVISQVLELGIVVHSVIIGIGLGVSETPKTIRPLVAAITFHQLFEGMGLGGCIAQAKFKNRATIIMGLFFCLTTPIGIAIGIGVTKTYDEDSPKALIVEGILNAASSGILIYMALVDLLAADFMNPRMQSNGKLQLFANLSLILGAALMSLLAIWA 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 32727640 32729814 + CrPI670011_11g020940.1 Cre11g2094 513839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g2094 364 NCBIfam ZIP zinc/iron transport family 38 364 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Cre11g2094 364 PANTHER ZINC/IRON TRANSPORTER 48 363 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Cre11g2094 364 Pfam ZIP Zinc transporter 52 361 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0204 Cre-Chr1:1426646 Cre11g2094 Cre-Chr11:32727640 8.60E-97 dispersed
Cre02g2252 Cre-Chr2:36124022 Cre11g2094 Cre-Chr11:32727640 6.40E-62 dispersed
Cre04g1927 Cre-Chr4:36810892 Cre11g2094 Cre-Chr11:32727640 1.20E-75 dispersed
Cre08g1643 Cre-Chr8:28950993 Cre11g2094 Cre-Chr11:32727640 1.10E-71 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g2094 K14709 - csv:101215851 579.326