Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre11g2117 | ATGAGCCAGGAAGACAAATCCGCCACTGTGGGTGTCGTCGTCCACCACCATCACGAATCCAATTCCGGCCACCCTCACTACGGAACCTTCCAAGGCGTCGCTAACTATCCTCCCGTCGGATTCCCCCAGCCTACTCGCCCGCCTGGTGTCTCCGACTCCGATGATCCTTCTCAATATCAGCAATATGCTCATGGCTATCAAGCTGTCCCCGGATATGCTATTGTTGAAGGAAGACCAGTGAGAGAGCAGCGCCTTCCTTGCTGCGGTATTGGCATCGGGTGGTTCCTGTTTATTATTGGTTTCTTCCTTCCTGCTATCCCATGGTATGCTGGAGCAGTTCTTATACTATGTGGCAGGGTAGACTACCGTGAGAAACCAGGATATGTTGCTTGCTCAATTGCTGCTGTTCTTGCCACAGTTGCAATTATTTTCGGTGCCACAAAGGAAGCCGATGTCTGCCAGGTTGTTGCTCAGCCTGATGATCTTCTAAGGTTAAATCTTCTAAAGGCCGAAGAAGTTAGAGAAGCTTTTAAGACCGCAAGGATTGTCTACGGCGACTTGAAGGACGAAGCCGCCATGAGAGAGCAGGTCATGTCCAAGCCCATGAACTTCTCCAATCATATTGCTCCACGTGTTATTCCTTTTACTCATCATACCATCCACAATTATGGCAAGAATTCATTCATGTGGGCTGGGCCTATGCCAAGAGTGCACATCACGGACACTAAACAACTTAAAACTGTGTTTTCATTGATTAATGATTTCCAAAAGCCAACTATGAATCCCATTATCAAGTTGCTTGCAGATGAACTTGATATGGTACCAGCAATATTCTATCACAGTTGTAACGAGATGGTTAGCAAATGGGAAAGCATGGTCTCTGTAGAAGGATCTTGTGAGTTAGATGTAAGGCCTTTTTTACAAAATATGGCTGCAGATATGATTTCTCGAACTGCATTTGGGAGTAGCCATGAGAAAGGAAAAAAGATCTTCAAGCTTCAAACTGAACTAGCTAAATTGGTGGCTCAATCTGCTTTTGGGATTTATATTCCAGGATGGAGATTTCTACCCACAAAGTCAAATAATAAAATAGAAGAGATAAATAAAGAGATAAAAACTTTGATTTTGGGTATTATAAATGAAAGGGAAAAGTCTATGAAGGAAGGTGAAGCTATGCAAAGTGATCTACTAAGCATTCTCATGGAATCCAATTTCAATGAACTTAAACATGGAAATAATAAAGACATTAGAATGAGCAAAGAAGATGTTATTACTGAATGCAAGCTTTTCTATATTGCTGGCCAAGAAACTACAACAACATTACTAATTTGGACGATGGTATTGTTGAGTTCATACTCAGAATGGCAAGAACGAGCGAGAGCAGAGGTCTTTGAAATCTTTGGTAATAAGAAACCAGATTATGATGGTTTAAGTCGTCTAAAAATTGTTCTCAGATTATACCCACCAGTGGGTATGATTAGTCGTCTTGTTAAAAAAGAAACAAGACTTGGAAAATTGACTTTACCAGCAGAACTTATGTTAGGCTTACCGATTGTTCTTATCCAACATGATCCTAAGCTATGGGGAGAAGATGCAGATGAATTTAAACCAGAAAGATTTTCTGCCGGAGTTTCGAAAGCAACAAAGAATCCAATTGCTTTTCTACCATTTGGTTGGGGTCCTCGAATATGCATAGGACTAAACTTTGCCATGATTGAAGCGAAAATGACATTATCAATGATCCTGCAACGATTTTCATTTGAGCTTTCATCATTATATACACACGCTCCCACCGTTGTTGTAACAACGCAACCTCAACATGGAGCTCATATCATACTACACAAATTGTAG | 1851 | 41.27 | MSQEDKSATVGVVVHHHHESNSGHPHYGTFQGVANYPPVGFPQPTRPPGVSDSDDPSQYQQYAHGYQAVPGYAIVEGRPVREQRLPCCGIGIGWFLFIIGFFLPAIPWYAGAVLILCGRVDYREKPGYVACSIAAVLATVAIIFGATKEADVCQVVAQPDDLLRLNLLKAEEVREAFKTARIVYGDLKDEAAMREQVMSKPMNFSNHIAPRVIPFTHHTIHNYGKNSFMWAGPMPRVHITDTKQLKTVFSLINDFQKPTMNPIIKLLADELDMVPAIFYHSCNEMVSKWESMVSVEGSCELDVRPFLQNMAADMISRTAFGSSHEKGKKIFKLQTELAKLVAQSAFGIYIPGWRFLPTKSNNKIEEINKEIKTLILGIINEREKSMKEGEAMQSDLLSILMESNFNELKHGNNKDIRMSKEDVITECKLFYIAGQETTTTLLIWTMVLLSSYSEWQERARAEVFEIFGNKKPDYDGLSRLKIVLRLYPPVGMISRLVKKETRLGKLTLPAELMLGLPIVLIQHDPKLWGEDADEFKPERFSAGVSKATKNPIAFLPFGWGPRICIGLNFAMIEAKMTLSMILQRFSFELSSLYTHAPTVVVTTQPQHGAHIILHKL | 616 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 32882781 | 32893877 | + | CrPI670011_11g021170.1 | Cre11g2117 | 513862 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre11g2117 | 616 | Gene3D | Cytochrome P450 | 205 | 613 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g2117 | 616 | PRINTS | P450 superfamily signature | 478 | 489 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g2117 | 616 | PRINTS | P450 superfamily signature | 564 | 575 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g2117 | 616 | PRINTS | P450 superfamily signature | 555 | 564 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g2117 | 616 | PRINTS | P450 superfamily signature | 433 | 450 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g2117 | 616 | SUPERFAMILY | Cytochrome P450 | 210 | 614 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g2117 | 616 | PRINTS | E-class P450 group I signature | 310 | 328 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g2117 | 616 | PRINTS | E-class P450 group I signature | 564 | 587 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g2117 | 616 | PRINTS | E-class P450 group I signature | 554 | 564 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g2117 | 616 | PRINTS | E-class P450 group I signature | 442 | 468 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g2117 | 616 | PRINTS | E-class P450 group I signature | 422 | 439 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g2117 | 616 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 175 | 608 | IPR050665 | GO:0004497(PANTHER) | |
| Cre11g2117 | 616 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 557 | 566 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cre11g2117 | 616 | Pfam | Cytochrome P450 | 277 | 591 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre03g1013 | Cre-Chr3:8969419 | Cre11g2117 | Cre-Chr11:32882781 | 2.00E-40 | dispersed | |
| Cre11g2117 | Cre-Chr11:32882781 | Cre11g2119 | Cre-Chr11:32905894 | 1.60E-207 | dispersed | |
| Cre11g2117 | Cre-Chr11:32882781 | Cre11g2118 | Cre-Chr11:32898330 | 3.60E-207 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre11g2117 | - | - | - | 0.0 |