Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g2118 ATGTCGTCTGTGGCAGCTACGATTTCAATTTGGATAATACTTGTGGTATTATTATTATTGGGATGCAAATTTGTAAACTGGATTTGGTTGAAGCCTAAGAAATTAGAGAAGGTTTTAAGAGAGCAAGGATTCGCCGGAAATTCTTACCGGATTCTCTACGGCGACTTGAAGTTCAGAGCTGCCATGAGAGAGCAGGCACTGTCCAAGCCCATGAACTTCTCCAATGATATCGCTCCACGTGTCATTCCATCTATTCATCATACCATCCAGAATTATGGCAAAAATTCATTTATGTGGCTTGGACCCATACCAAGAGTGCACATCATGGACCCTGAACAACTTAAAATTGTGTTTTCATTGATCAATGATTTCCAAAAGCCAACTATAAATCCCTTTGCCAGGTTGCTTGCAGATGGGATTTTAATTCATGAAGGACCAAAATGGGTCAAACACAGAAAGATAATCAATCCTGCATTTCATTTAGAAAAGCTTAAGGATATGGTACCAGCATTCTATCACAGTTGTAACGAGATGGTTAGCAAATGGGAAAACATGGTCTTTGTAGAAGGATCTTGTGAGTTAGATGTCATGCCTTACCTACAAAATATGACTGCTGATGTGATTTCTCGAACTGCATTTGGTAGTAGCTATGAGAAAGGAAAAAAGATCTTCAAGCTTCAAACTGAACTAGCTGAATTGGTGATTCAATCTACCTTAGGGGTTTATATTCCAGGATGGAGATTTCTACCCACAAAGTCAAACAATAAAATGAAAGAGATAAGTAATGAGATAACAACTTTGATCTTGGGTATTATGAATGAAAAGGAAAAGTCTATGAAGGCAGGTGAAGCTATACAAACTGATCTACTTAGCATTCTCATGGAATCCAATTTGAATGAAATTAAACAACATGGAAACAATAAAGACATTGGAATGAGCATAGAAGATGTTATTGCTGAATGCAAGCTTTTCTACATTGCTGGCCAAGAAACTACAGCTACATTACTAGTTTGGACGATGGTATTGCTGAGTACATACTCAGAATGGCAAGAGCGAGCAAGAGCAGAGGTCTTTGAGATCTTTGGTAACAAGAAACCAGACTATGATGGTTTAAGTCGACTAAAAGTTGTAACTATGATCTTGAACGAGGTTCTTAGGTTATACCCACCAGTGAGTATGTTTGGTCGTTTTGTTAAAAAAGAAACACGACTTGGAAAATTGACTTTACCAGCTGGAGTGATGTTGGCCTTACCAACTATTCTTATCCAACGTGATCCTGAACTATGGGGAGAAGATGCAAATGAATTTAAACCAGAAAGGTTTTCTAAGGGAGTTTCTAAAGCAACAAAAAATCCAAGTGCTTTTGTACCCTTTGGTTGGGGTCCTCGAATATGCATAGGACTAAACTTTGCCATGATTGAAGCAAAGTTGGCATTATCAATGATCCTTCAACGCTTCTCATTTGAGCTTTCGTCATCGTATACACATGCTCCCACGGTCACCATAACAACGCAACCTCAACATGGAGCTCATATCATCCTACATAAACTGTAG 1554 38.55 MSSVAATISIWIILVVLLLLGCKFVNWIWLKPKKLEKVLREQGFAGNSYRILYGDLKFRAAMREQALSKPMNFSNDIAPRVIPSIHHTIQNYGKNSFMWLGPIPRVHIMDPEQLKIVFSLINDFQKPTINPFARLLADGILIHEGPKWVKHRKIINPAFHLEKLKDMVPAFYHSCNEMVSKWENMVFVEGSCELDVMPYLQNMTADVISRTAFGSSYEKGKKIFKLQTELAELVIQSTLGVYIPGWRFLPTKSNNKMKEISNEITTLILGIMNEKEKSMKAGEAIQTDLLSILMESNLNEIKQHGNNKDIGMSIEDVIAECKLFYIAGQETTATLLVWTMVLLSTYSEWQERARAEVFEIFGNKKPDYDGLSRLKVVTMILNEVLRLYPPVSMFGRFVKKETRLGKLTLPAGVMLALPTILIQRDPELWGEDANEFKPERFSKGVSKATKNPSAFVPFGWGPRICIGLNFAMIEAKLALSMILQRFSFELSSSYTHAPTVTITTQPQHGAHIILHKL 517
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 32898330 32902071 + CrPI670011_11g021180.1 Cre11g2118 513863
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre11g2118 517 PANTHER CYTOCHROME P450 FAMILY MEMBER 15 509 IPR050665 GO:0004497(PANTHER)
Cre11g2118 517 CDD CYP72 82 513 - -
Cre11g2118 517 FunFam Cytochrome P450 734A1 29 517 - -
Cre11g2118 517 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g2118 517 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g2118 517 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g2118 517 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g2118 517 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g2118 517 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g2118 517 SUPERFAMILY Cytochrome P450 80 515 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g2118 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre11g2118 517 Gene3D Cytochrome P450 74 516 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g2118 517 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g2118 517 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g2118 517 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g2118 517 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g2118 517 Pfam Cytochrome P450 88 492 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre11g1031 Cre-Chr11:7710874 Cre11g2118 Cre-Chr11:32898330 2.10E-91 dispersed
Cre11g2118 Cre-Chr11:32898330 Cre11g2120 Cre-Chr11:32914293 5.90E-280 dispersed
Cre11g2117 Cre-Chr11:32882781 Cre11g2118 Cre-Chr11:32898330 3.60E-207 tandem
Cre11g2118 Cre-Chr11:32898330 Cre11g2119 Cre-Chr11:32905894 5.20E-276 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g2118 - - - 0.0