Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre11g2120 | ATGTCGTCTGTAGGAGCTACGATTTCAATTTGGTTAATACTTGTGGTATTATCATTATTGGGATGGAGATTTCTAAACTGGATTTGGTTAAAGCCCAAGAAATTAGAGAAGCTTTTAAGACAGCAAGGTTTCGCCGGAAATTCTTACCGGATTCTCTACGGCGATTTGAAGTTCAGAGCCGCCATGAGAGAGCAGGCCGTGTCCAAGCCCATGAACTTCTCCAATCATATTGCTCCACGTGTTATTCCTTCTGTTCATCATACCATCCACAAATATGGCAAGAATTCATTCATGTGGCTTGGACCTATGCCAAGAGTGCACATCATGGACCCTGAACAACTTAAAATTGTATTTTCAATGATCAATGATTTCCAAAAGCCAGATTCAAATCCCCTAGTCAAGTTGCTTGCAGATGGAATTGTAAATTATGAAGGACCAAAATGGGTCAAACATAGAAAGATAATCAACCCTGCATTTCATTTAGAAAAGCTTAAGGATATGGTACCAGCATTCTATCACAGTTGTAACGAGATGGTTAGCAAATGGGAAAGTATGGTCTCCATAGAAGGATCTTGTGAGTTGGATGTAATGCCTTATTTACAAAATATGGCTGCTGATGTGATTTCTCGAACTGCATTTGGTAGTAGCTATGAGAAAGGAAAAAAGATCTTCAAGCTTCAAACTGAACTAGCTGAATTGGTGATTCAATCTACCTTACGGGTTTATATTCCAGGATGGAGATTTCTACCCACAAAGTCAAACAATAAAATGAAAGAGATAAGTAATGAGATAACAACTTTGATCTTGGGTATTATGAATGAAAGGGAAAAGTCTATGAAGGCAGGTGAAGCTATACAAACCGATCTACTTAGCATTCTCATGGAATCCAATTTGAATGAAATTAAACAACATGGAAACAATAAAGACATTGGAATGAGCATAGAAGAAGTTATTGCTGAATGCAAGCTTTTCTATATTGCTGGCCAAGAAACTACAGCTACATTACTAGTTTGGACGATGGTATTGTTGAGTACATACTCAGAATGGCAAGAGCGAGCAAGAGCAGAGGTCTTTGAGATCTTTGGTAACAAGAAACCAGACTATGATGGTTTAAGTCGACTAAAAGTTGTAACTATGATCTTGAATGAGGTTCTTAGGTTATACCCACCAGTGAATATGTTTGGTCGTGTTGTTAAAAAAGAAACAAAACTTGGAAATGTGACTTTACCAGCAGGAGTGATGTTGGGCTTACCAAGTATTCTCATCCAACGTGATCCTGAGTCATGGGGAAATGATGCAGATGAATTTAAACCAGAAAGATTTTCTGAGGGAATTTCTAAAGCAACAAAAAATCCAAGTGCTTTTCTACCATTTGGTTGGGGTCCTCGAATATGCATAGGACTAAACTTTGCCATGATTGAAGCAAAAATGGCATTGTCAATGATCCTACAACGCTTCTCATTTGAGCTTTCATCATCATATACACACACTCCCACCGCCTTCTTAACAACCCAGCCTCAACATGGAGCTCATCTCATACTACACAAACTCTAG | 1554 | 38.48 | MSSVGATISIWLILVVLSLLGWRFLNWIWLKPKKLEKLLRQQGFAGNSYRILYGDLKFRAAMREQAVSKPMNFSNHIAPRVIPSVHHTIHKYGKNSFMWLGPMPRVHIMDPEQLKIVFSMINDFQKPDSNPLVKLLADGIVNYEGPKWVKHRKIINPAFHLEKLKDMVPAFYHSCNEMVSKWESMVSIEGSCELDVMPYLQNMAADVISRTAFGSSYEKGKKIFKLQTELAELVIQSTLRVYIPGWRFLPTKSNNKMKEISNEITTLILGIMNEREKSMKAGEAIQTDLLSILMESNLNEIKQHGNNKDIGMSIEEVIAECKLFYIAGQETTATLLVWTMVLLSTYSEWQERARAEVFEIFGNKKPDYDGLSRLKVVTMILNEVLRLYPPVNMFGRVVKKETKLGNVTLPAGVMLGLPSILIQRDPESWGNDADEFKPERFSEGISKATKNPSAFLPFGWGPRICIGLNFAMIEAKMALSMILQRFSFELSSSYTHTPTAFLTTQPQHGAHLILHKL | 517 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 32914293 | 32920881 | + | CrPI670011_11g021200.1 | Cre11g2120 | 513865 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre11g2120 | 517 | Gene3D | Cytochrome P450 | 72 | 516 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g2120 | 517 | CDD | CYP72 | 82 | 513 | - | - | |
| Cre11g2120 | 517 | PRINTS | E-class P450 group I signature | 316 | 333 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g2120 | 517 | PRINTS | E-class P450 group I signature | 336 | 362 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g2120 | 517 | PRINTS | E-class P450 group I signature | 419 | 443 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g2120 | 517 | PRINTS | E-class P450 group I signature | 465 | 488 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g2120 | 517 | PRINTS | E-class P450 group I signature | 89 | 108 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g2120 | 517 | PRINTS | E-class P450 group I signature | 455 | 465 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g2120 | 517 | PRINTS | E-class P450 group I signature | 203 | 221 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g2120 | 517 | SUPERFAMILY | Cytochrome P450 | 79 | 515 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g2120 | 517 | FunFam | Cytochrome P450 734A1 | 29 | 517 | - | - | |
| Cre11g2120 | 517 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 458 | 467 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cre11g2120 | 517 | PRINTS | P450 superfamily signature | 465 | 476 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g2120 | 517 | PRINTS | P450 superfamily signature | 327 | 344 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g2120 | 517 | PRINTS | P450 superfamily signature | 456 | 465 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g2120 | 517 | PRINTS | P450 superfamily signature | 379 | 390 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g2120 | 517 | Pfam | Cytochrome P450 | 88 | 493 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre11g2120 | 517 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 15 | 510 | IPR050665 | GO:0004497(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre03g1897 | Cre-Chr3:35993262 | Cre11g2120 | Cre-Chr11:32914293 | 1.70E-218 | dispersed | |
| Cre05g2530 | Cre-Chr5:36618001 | Cre11g2120 | Cre-Chr11:32914293 | 3.10E-106 | dispersed | |
| Cre10g1652 | Cre-Chr10:30738190 | Cre11g2120 | Cre-Chr11:32914293 | 1.80E-191 | dispersed | |
| Cre11g2118 | Cre-Chr11:32898330 | Cre11g2120 | Cre-Chr11:32914293 | 5.90E-280 | dispersed | |
| Cre11g2120 | Cre-Chr11:32914293 | Cre03g0614 | Cre-Chr3:5062887 | 3.10E-26 | dispersed | |
| Cre11g2119 | Cre-Chr11:32905894 | Cre11g2120 | Cre-Chr11:32914293 | 1.60E-272 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre11g2120 | - | - | - | 0.0 |