Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g2120 ATGTCGTCTGTAGGAGCTACGATTTCAATTTGGTTAATACTTGTGGTATTATCATTATTGGGATGGAGATTTCTAAACTGGATTTGGTTAAAGCCCAAGAAATTAGAGAAGCTTTTAAGACAGCAAGGTTTCGCCGGAAATTCTTACCGGATTCTCTACGGCGATTTGAAGTTCAGAGCCGCCATGAGAGAGCAGGCCGTGTCCAAGCCCATGAACTTCTCCAATCATATTGCTCCACGTGTTATTCCTTCTGTTCATCATACCATCCACAAATATGGCAAGAATTCATTCATGTGGCTTGGACCTATGCCAAGAGTGCACATCATGGACCCTGAACAACTTAAAATTGTATTTTCAATGATCAATGATTTCCAAAAGCCAGATTCAAATCCCCTAGTCAAGTTGCTTGCAGATGGAATTGTAAATTATGAAGGACCAAAATGGGTCAAACATAGAAAGATAATCAACCCTGCATTTCATTTAGAAAAGCTTAAGGATATGGTACCAGCATTCTATCACAGTTGTAACGAGATGGTTAGCAAATGGGAAAGTATGGTCTCCATAGAAGGATCTTGTGAGTTGGATGTAATGCCTTATTTACAAAATATGGCTGCTGATGTGATTTCTCGAACTGCATTTGGTAGTAGCTATGAGAAAGGAAAAAAGATCTTCAAGCTTCAAACTGAACTAGCTGAATTGGTGATTCAATCTACCTTACGGGTTTATATTCCAGGATGGAGATTTCTACCCACAAAGTCAAACAATAAAATGAAAGAGATAAGTAATGAGATAACAACTTTGATCTTGGGTATTATGAATGAAAGGGAAAAGTCTATGAAGGCAGGTGAAGCTATACAAACCGATCTACTTAGCATTCTCATGGAATCCAATTTGAATGAAATTAAACAACATGGAAACAATAAAGACATTGGAATGAGCATAGAAGAAGTTATTGCTGAATGCAAGCTTTTCTATATTGCTGGCCAAGAAACTACAGCTACATTACTAGTTTGGACGATGGTATTGTTGAGTACATACTCAGAATGGCAAGAGCGAGCAAGAGCAGAGGTCTTTGAGATCTTTGGTAACAAGAAACCAGACTATGATGGTTTAAGTCGACTAAAAGTTGTAACTATGATCTTGAATGAGGTTCTTAGGTTATACCCACCAGTGAATATGTTTGGTCGTGTTGTTAAAAAAGAAACAAAACTTGGAAATGTGACTTTACCAGCAGGAGTGATGTTGGGCTTACCAAGTATTCTCATCCAACGTGATCCTGAGTCATGGGGAAATGATGCAGATGAATTTAAACCAGAAAGATTTTCTGAGGGAATTTCTAAAGCAACAAAAAATCCAAGTGCTTTTCTACCATTTGGTTGGGGTCCTCGAATATGCATAGGACTAAACTTTGCCATGATTGAAGCAAAAATGGCATTGTCAATGATCCTACAACGCTTCTCATTTGAGCTTTCATCATCATATACACACACTCCCACCGCCTTCTTAACAACCCAGCCTCAACATGGAGCTCATCTCATACTACACAAACTCTAG 1554 38.48 MSSVGATISIWLILVVLSLLGWRFLNWIWLKPKKLEKLLRQQGFAGNSYRILYGDLKFRAAMREQAVSKPMNFSNHIAPRVIPSVHHTIHKYGKNSFMWLGPMPRVHIMDPEQLKIVFSMINDFQKPDSNPLVKLLADGIVNYEGPKWVKHRKIINPAFHLEKLKDMVPAFYHSCNEMVSKWESMVSIEGSCELDVMPYLQNMAADVISRTAFGSSYEKGKKIFKLQTELAELVIQSTLRVYIPGWRFLPTKSNNKMKEISNEITTLILGIMNEREKSMKAGEAIQTDLLSILMESNLNEIKQHGNNKDIGMSIEEVIAECKLFYIAGQETTATLLVWTMVLLSTYSEWQERARAEVFEIFGNKKPDYDGLSRLKVVTMILNEVLRLYPPVNMFGRVVKKETKLGNVTLPAGVMLGLPSILIQRDPESWGNDADEFKPERFSEGISKATKNPSAFLPFGWGPRICIGLNFAMIEAKMALSMILQRFSFELSSSYTHTPTAFLTTQPQHGAHLILHKL 517
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 32914293 32920881 + CrPI670011_11g021200.1 Cre11g2120 513865
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre11g2120 517 Gene3D Cytochrome P450 72 516 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g2120 517 CDD CYP72 82 513 - -
Cre11g2120 517 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g2120 517 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g2120 517 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g2120 517 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g2120 517 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g2120 517 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g2120 517 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g2120 517 SUPERFAMILY Cytochrome P450 79 515 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g2120 517 FunFam Cytochrome P450 734A1 29 517 - -
Cre11g2120 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre11g2120 517 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g2120 517 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g2120 517 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g2120 517 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g2120 517 Pfam Cytochrome P450 88 493 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre11g2120 517 PANTHER CYTOCHROME P450 FAMILY MEMBER 15 510 IPR050665 GO:0004497(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1897 Cre-Chr3:35993262 Cre11g2120 Cre-Chr11:32914293 1.70E-218 dispersed
Cre05g2530 Cre-Chr5:36618001 Cre11g2120 Cre-Chr11:32914293 3.10E-106 dispersed
Cre10g1652 Cre-Chr10:30738190 Cre11g2120 Cre-Chr11:32914293 1.80E-191 dispersed
Cre11g2118 Cre-Chr11:32898330 Cre11g2120 Cre-Chr11:32914293 5.90E-280 dispersed
Cre11g2120 Cre-Chr11:32914293 Cre03g0614 Cre-Chr3:5062887 3.10E-26 dispersed
Cre11g2119 Cre-Chr11:32905894 Cre11g2120 Cre-Chr11:32914293 1.60E-272 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g2120 - - - 0.0