Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre11g2131 | ATGCCTGGGAATAAGTATAACGGTAACTCAAACGATATTTCAGACCGTATACCAGGTCGAGTGGAAAGGCTCTTGCGAGAGAGAAAGCTAAGGAAAAGCTGTAAGGATTCATATTCAAACGAGGTAAACGACTACATTAAGGAGTCTGAACTAATTGAAAATGACCTTCGTTTGAAAGAAGAAGAAACCGTTGGAATTCCCTGTAAATTTTCGGAAGCTTCTGTAGCCTCGAGGGCCTTTGCCGAAGGATGTGACAAGCAAGATGGCAAGCCTCCCAGACAACGGCTGCTGGTTGTGGCCAATAGGCTGCCCGTCTCTGCAGTTAGGAGGGGTGAAGATTCCTGGTCTCTGGAGATTAGTGCTGGAGGTTTAGTGAGTGCACTTCTGGGGGTGAAGGAATTTGAGGCCAGATGGATTGGTTGGGCTGGTGTAAATGTACCAGATGAGGTGGGACAAAAGGCACTGACTGAAGCTTTGGCTGAAAAGAGGTGTATACCTGTTTTCCTTGATGAAGAGATTGTTCATCAATACTACAATGGTTACTGCAACAACATTTTATGGCCTCTGTTTCATTACCTTGGCCTTCCTCAAGAAGATCGTCTTGCCACCACCCGTAGCTTTCAGTCTCAGTTTGCCGCATACAAGAAGGCAAACCAAATGTTTGCTGATGTAGTTAACAAGCACTATGAGGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGTTCCTTCCAAAATGCCTCAAGGAACATAATCGTAAGATGAAAGTCGGCTGGTTTCTCCATACACCTTTTCCTTCCTCTGAAATCCACAGAACCCTTCCGTCTCGATCAGAGCTTCTGCGCTCAGTACTTGCTGCTGATCTGGTTGGCTTTCACACATATGATTATGCTCGTCATTTTGTGAGTGCTTGTACTCGTATTCTTGGACTTGAGGGTACACCAGAAGGAGTTGAGGACCAAGGAAAGCTAACACGAGTTGCTGCATTCCCTATTGGTATAGACTCGGATCGATTCATACGTGCACTCAAGATTCCTGAAGTCCAGGAACATATTGAAGAGCTAAAGGAAAGATTCAAAGGTCGAAAGGTAATGCTAGGGGTTGATCGTCTTGATATGATTAAAGGAATACCTCAAAAGATATTAGCATTTGAAAAATTCTTGGAGGAAAACCCTTATTGGCGTGATAAAGTGGTTTTGCTGCAAATTGCAGTGCCAACAAGAACAGATGTGCCAGAATACCAAAAGCTTACAAGCCAAGTTCATGAAATAGTTGGACGTATTAATGGGAGATTTGGAACATTGACTACTGTGCCTATACATCATCTGGATCGCTCCCTTGATTTTCATGCACTATGTGCACTATATGCTGTAACTGATGTAGCACTTGTCACATCTTTGAGGGATGGAATGAATCTCGTCAGTTATGAGTTCGTTGCTTGCCAGGATGCGAAGAAAGGGGTTTTAATTCTTAGCGAGTTTGCTGGTGCTGCACAATCTCTTGGTGCTGGAGCACTTTTGGTCAACCCCTGGAACATAACAGAAGTCGCCAAATCAATTGATCGAGCATTAAATATGGGTGCTGAAGAAAGAGAAAAACGCCATAGGCATAATTTTCTCCATGTGACGACGCACACTGCCCAGGAATGGGCAGAAACTTTTGTGAGTGAACTTAATGATACAGTCGTTGAAGCTGAACTGAGGATTCGACAATGTCCGCCCCTGCTTCCATTTGACAATGCAATTAAACATTATGAGCAATCTACTAATCGATTACTTATACTGGGGTTCAATTCAACATTAACTGAACCAGTGGACACACCCGAGAGAAGAGGTGATCAGATTAGAGAAATGGATCTGAAACTACACCCGGAGTTGAAAGAACCATTGACAGCAATTTGCAACGATCCAAATACGACAGTAGTCATTCTCAGTGGGAGCGACAGAACTGTCTTGGATGATAACTTCGGGGAGTATGACATGTGGTTGGCAGCTGAGAATGGGATGTTTCTACGCTTCACAAGGGGGGACTGGATGACTACAATGCCTGAGCATTTGAATATGGAATGGGTCGACAGTGTGAAGCATGTTTTTGAGTACTTCACTGAGAGAACTCCCCGTTCCCATTTTGAGCTTCGGGAAACTTCACTTGTTTGGAACTATAAATATGCAGATGTTGAGTTTGGAAGGCTTCAAGCAAGGGATATGTTGCAGCATTTATGGACAGGTCCAATTTCTAATGCATCGGTTGATGTTGTTCAAGGTAGCCGATCTGTTGAGGTGCGAGCTGTTGGTGTTACCAAGGGATCAGCAATTGACCGAATATTGGGAGAAATAGTTCATAGCAAGTCCATGACGACTCCAATAGACTATGTCTTGTGTGTAGGCCATTTTCTTGGGAAGTTCATGATCGTACCGTACCTCTTTGCTAGCCCTCCTACTCATTCAAATTATTCATGTCATCAGGATGAAGATGTCTACACTTTCTTTGAGCCTGAACTTCCATCGGATACTATAGGCATGGCAAGAACCAAGGGAACCGATGGACTTAAGTTAACGGGTGAGAGAAGACCTTCCATCAATGTTCCTCTAAATAGGAATGGATCAAAATCGCCTCACAATAAGGGTCGGTCGAGCTCGGAGAAGAAAACTTCAAATCATAACTGTGCAAACGGTCGTAAACCATCACCCGAGAAGATTCAATGGAATGTGCTTGATCTGAAGGCTGAGAACTACTTCTCTTGTGCTGTTGGACGATCTCGGACGAATGCTCGGTATCTGCTCGGATCATCAGATGATGTGGTGACATTCCTAAAGAAGTTGATGGTTCTTCTCGGTTCCATCTTCTCAATTTGCAGGGATGCAGCTGGAGTCGCTGGGCACATATTTGCTTTCGGGCTTTTCCTGTCACCTTTAGATACATTTCGACGTGTTATCAGAAACAAAACAACAGAACAGTTTTCGGGTTTGCCGTATATATATTCTCTGTTAAACTGCCTTATTTGCCTATGGTATGGCACACCTCTCATTTCTCCCAGAAACATGATGGTCGTGACTGTCAATTCAATCGGTGCGGTTTTTCAGTTAGTGTACATCATGCTCTTCATAGCATATGCTGAGAAGGGGAAAAAGATAAAAATGCTAGGATTGTTGCTTGCAGTCTTTGGCCTTTTTATAGTTATTGTTGTTGGGAGCTTACAAATAACTGACCTCCCTTTGCGACGGAACGTTGTCGGGATTTTGAGTTGTGCATCTCTCGTTTCAATGTTCGCTTCTCCCTTGTTTATTATCAATTTGGTGATTCGAACAAAGAGTGTGGAGTTTATGCCATTTTATCTCTCCCTTTCGACCTTCCTCATGAGCATATCTTTCTTCCTTTATGGACTGTTCAATTACGACCTGTTCGTTTATGCCCCAAATGGGATAGGAGCCGTGTTGGGGATAGTTCAATTGGTGTTGTACTGCTACTACAGTCGAGTTGCCAAAGAGGAGTCTAGAGAACCTTTAATCGACAGTGTGGAAACGGGAGAACATTTTTACGTTTACCACAGGAACCCCAAATTTCCGAGGGTTGATAATTTGATCTTCCACAGCGTTGGTGTGCAGTTCGGCATTAGCCAACGAGCCGCTTTCGGGCTGCGCCTTGTGATTTTAAAAGCTTTGTTCTATGGCTCTGCTGCTGCCTCTATGATTTTGTCTACAAGCTGTTTGGACAAAGAATGA | 3726 | 43.69 | MPGNKYNGNSNDISDRIPGRVERLLRERKLRKSCKDSYSNEVNDYIKESELIENDLRLKEEETVGIPCKFSEASVASRAFAEGCDKQDGKPPRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALTEALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKEHNRKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSDRFIRALKIPEVQEHIEELKERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTTVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDAKKGVLILSEFAGAAQSLGAGALLVNPWNITEVAKSIDRALNMGAEEREKRHRHNFLHVTTHTAQEWAETFVSELNDTVVEAELRIRQCPPLLPFDNAIKHYEQSTNRLLILGFNSTLTEPVDTPERRGDQIREMDLKLHPELKEPLTAICNDPNTTVVILSGSDRTVLDDNFGEYDMWLAAENGMFLRFTRGDWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFELRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGSAIDRILGEIVHSKSMTTPIDYVLCVGHFLGKFMIVPYLFASPPTHSNYSCHQDEDVYTFFEPELPSDTIGMARTKGTDGLKLTGERRPSINVPLNRNGSKSPHNKGRSSSEKKTSNHNCANGRKPSPEKIQWNVLDLKAENYFSCAVGRSRTNARYLLGSSDDVVTFLKKLMVLLGSIFSICRDAAGVAGHIFAFGLFLSPLDTFRRVIRNKTTEQFSGLPYIYSLLNCLICLWYGTPLISPRNMMVVTVNSIGAVFQLVYIMLFIAYAEKGKKIKMLGLLLAVFGLFIVIVVGSLQITDLPLRRNVVGILSCASLVSMFASPLFIINLVIRTKSVEFMPFYLSLSTFLMSISFFLYGLFNYDLFVYAPNGIGAVLGIVQLVLYCYYSRVAKEESREPLIDSVETGEHFYVYHRNPKFPRVDNLIFHSVGVQFGISQRAAFGLRLVILKALFYGSAAASMILSTSCLDKE | 1241 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 32983854 | 33001699 | - | CrPI670011_11g021310.1 | Cre11g2131 | 513876 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre11g2131 | 1241 | Coils | Coil | 42 | 62 | - | - | |
Cre11g2131 | 1241 | CDD | GT20_TPS | 95 | 560 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
Cre11g2131 | 1241 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 85 | 943 | IPR001830 | GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(PANTHER)|GO:0005992(InterPro)|GO:0070413(PANTHER) | |
Cre11g2131 | 1241 | Pfam | Trehalose-phosphatase | 617 | 800 | IPR003337 | GO:0005992(InterPro) | |
Cre11g2131 | 1241 | MobiDBLite | consensus disorder prediction | 861 | 875 | - | - | |
Cre11g2131 | 1241 | CDD | HAD_TPP | 593 | 797 | - | - | |
Cre11g2131 | 1241 | Pfam | Glycosyltransferase family 20 | 95 | 560 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
Cre11g2131 | 1241 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 94 | 563 | - | - | |
Cre11g2131 | 1241 | Gene3D | Glycogen Phosphorylase B; | 87 | 341 | - | - | |
Cre11g2131 | 1241 | Gene3D | - | 952 | 1045 | - | - | |
Cre11g2131 | 1241 | Pfam | Sugar efflux transporter for intercellular exchange | 1078 | 1160 | IPR004316 | GO:0016020(InterPro) | |
Cre11g2131 | 1241 | Pfam | Sugar efflux transporter for intercellular exchange | 958 | 1042 | IPR004316 | GO:0016020(InterPro) | |
Cre11g2131 | 1241 | Gene3D | - | 1076 | 1169 | - | - | |
Cre11g2131 | 1241 | FunFam | Bidirectional sugar transporter SWEET | 1075 | 1168 | - | - | |
Cre11g2131 | 1241 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like | 342 | 544 | - | - | |
Cre11g2131 | 1241 | FunFam | Alpha,alpha-trehalose-phosphate synthase | 619 | 690 | - | - | |
Cre11g2131 | 1241 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 | 87 | 341 | - | - | |
Cre11g2131 | 1241 | NCBIfam | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | 95 | 560 | IPR012766 | GO:0003825(InterPro)|GO:0005992(InterPro) | |
Cre11g2131 | 1241 | SUPERFAMILY | HAD-like | 592 | 781 | IPR036412 | - | |
Cre11g2131 | 1241 | MobiDBLite | consensus disorder prediction | 839 | 897 | - | - | |
Cre11g2131 | 1241 | Gene3D | Glycogen Phosphorylase B; | 342 | 544 | - | - | |
Cre11g2131 | 1241 | FunFam | Bidirectional sugar transporter SWEET | 955 | 1045 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre07g0616 | Cre-Chr7:3955023 | Cre11g2131 | Cre-Chr11:32983854 | 2.70E-120 | dispersed | |
Cre08g0596 | Cre-Chr8:18906448 | Cre11g2131 | Cre-Chr11:32983854 | 6.20E-49 | dispersed | |
Cre09g2448 | Cre-Chr9:43831736 | Cre11g2131 | Cre-Chr11:32983854 | 2.70E-39 | dispersed | |
Cre10g0401 | Cre-Chr10:2861517 | Cre11g2131 | Cre-Chr11:32983854 | 5.80E-126 | dispersed | |
Cre10g1574 | Cre-Chr10:29752274 | Cre11g2131 | Cre-Chr11:32983854 | 4.10E-37 | dispersed | |
Cre10g1575 | Cre-Chr10:29767489 | Cre11g2131 | Cre-Chr11:32983854 | 1.10E-34 | dispersed | |
Cre11g2131 | Cre-Chr11:32983854 | Cre03g0996 | Cre-Chr3:8794596 | 0.00E+00 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre11g2131 | K16055 | - | csv:101204478 | 1804.65 |