Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g2131 ATGCCTGGGAATAAGTATAACGGTAACTCAAACGATATTTCAGACCGTATACCAGGTCGAGTGGAAAGGCTCTTGCGAGAGAGAAAGCTAAGGAAAAGCTGTAAGGATTCATATTCAAACGAGGTAAACGACTACATTAAGGAGTCTGAACTAATTGAAAATGACCTTCGTTTGAAAGAAGAAGAAACCGTTGGAATTCCCTGTAAATTTTCGGAAGCTTCTGTAGCCTCGAGGGCCTTTGCCGAAGGATGTGACAAGCAAGATGGCAAGCCTCCCAGACAACGGCTGCTGGTTGTGGCCAATAGGCTGCCCGTCTCTGCAGTTAGGAGGGGTGAAGATTCCTGGTCTCTGGAGATTAGTGCTGGAGGTTTAGTGAGTGCACTTCTGGGGGTGAAGGAATTTGAGGCCAGATGGATTGGTTGGGCTGGTGTAAATGTACCAGATGAGGTGGGACAAAAGGCACTGACTGAAGCTTTGGCTGAAAAGAGGTGTATACCTGTTTTCCTTGATGAAGAGATTGTTCATCAATACTACAATGGTTACTGCAACAACATTTTATGGCCTCTGTTTCATTACCTTGGCCTTCCTCAAGAAGATCGTCTTGCCACCACCCGTAGCTTTCAGTCTCAGTTTGCCGCATACAAGAAGGCAAACCAAATGTTTGCTGATGTAGTTAACAAGCACTATGAGGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGTTCCTTCCAAAATGCCTCAAGGAACATAATCGTAAGATGAAAGTCGGCTGGTTTCTCCATACACCTTTTCCTTCCTCTGAAATCCACAGAACCCTTCCGTCTCGATCAGAGCTTCTGCGCTCAGTACTTGCTGCTGATCTGGTTGGCTTTCACACATATGATTATGCTCGTCATTTTGTGAGTGCTTGTACTCGTATTCTTGGACTTGAGGGTACACCAGAAGGAGTTGAGGACCAAGGAAAGCTAACACGAGTTGCTGCATTCCCTATTGGTATAGACTCGGATCGATTCATACGTGCACTCAAGATTCCTGAAGTCCAGGAACATATTGAAGAGCTAAAGGAAAGATTCAAAGGTCGAAAGGTAATGCTAGGGGTTGATCGTCTTGATATGATTAAAGGAATACCTCAAAAGATATTAGCATTTGAAAAATTCTTGGAGGAAAACCCTTATTGGCGTGATAAAGTGGTTTTGCTGCAAATTGCAGTGCCAACAAGAACAGATGTGCCAGAATACCAAAAGCTTACAAGCCAAGTTCATGAAATAGTTGGACGTATTAATGGGAGATTTGGAACATTGACTACTGTGCCTATACATCATCTGGATCGCTCCCTTGATTTTCATGCACTATGTGCACTATATGCTGTAACTGATGTAGCACTTGTCACATCTTTGAGGGATGGAATGAATCTCGTCAGTTATGAGTTCGTTGCTTGCCAGGATGCGAAGAAAGGGGTTTTAATTCTTAGCGAGTTTGCTGGTGCTGCACAATCTCTTGGTGCTGGAGCACTTTTGGTCAACCCCTGGAACATAACAGAAGTCGCCAAATCAATTGATCGAGCATTAAATATGGGTGCTGAAGAAAGAGAAAAACGCCATAGGCATAATTTTCTCCATGTGACGACGCACACTGCCCAGGAATGGGCAGAAACTTTTGTGAGTGAACTTAATGATACAGTCGTTGAAGCTGAACTGAGGATTCGACAATGTCCGCCCCTGCTTCCATTTGACAATGCAATTAAACATTATGAGCAATCTACTAATCGATTACTTATACTGGGGTTCAATTCAACATTAACTGAACCAGTGGACACACCCGAGAGAAGAGGTGATCAGATTAGAGAAATGGATCTGAAACTACACCCGGAGTTGAAAGAACCATTGACAGCAATTTGCAACGATCCAAATACGACAGTAGTCATTCTCAGTGGGAGCGACAGAACTGTCTTGGATGATAACTTCGGGGAGTATGACATGTGGTTGGCAGCTGAGAATGGGATGTTTCTACGCTTCACAAGGGGGGACTGGATGACTACAATGCCTGAGCATTTGAATATGGAATGGGTCGACAGTGTGAAGCATGTTTTTGAGTACTTCACTGAGAGAACTCCCCGTTCCCATTTTGAGCTTCGGGAAACTTCACTTGTTTGGAACTATAAATATGCAGATGTTGAGTTTGGAAGGCTTCAAGCAAGGGATATGTTGCAGCATTTATGGACAGGTCCAATTTCTAATGCATCGGTTGATGTTGTTCAAGGTAGCCGATCTGTTGAGGTGCGAGCTGTTGGTGTTACCAAGGGATCAGCAATTGACCGAATATTGGGAGAAATAGTTCATAGCAAGTCCATGACGACTCCAATAGACTATGTCTTGTGTGTAGGCCATTTTCTTGGGAAGTTCATGATCGTACCGTACCTCTTTGCTAGCCCTCCTACTCATTCAAATTATTCATGTCATCAGGATGAAGATGTCTACACTTTCTTTGAGCCTGAACTTCCATCGGATACTATAGGCATGGCAAGAACCAAGGGAACCGATGGACTTAAGTTAACGGGTGAGAGAAGACCTTCCATCAATGTTCCTCTAAATAGGAATGGATCAAAATCGCCTCACAATAAGGGTCGGTCGAGCTCGGAGAAGAAAACTTCAAATCATAACTGTGCAAACGGTCGTAAACCATCACCCGAGAAGATTCAATGGAATGTGCTTGATCTGAAGGCTGAGAACTACTTCTCTTGTGCTGTTGGACGATCTCGGACGAATGCTCGGTATCTGCTCGGATCATCAGATGATGTGGTGACATTCCTAAAGAAGTTGATGGTTCTTCTCGGTTCCATCTTCTCAATTTGCAGGGATGCAGCTGGAGTCGCTGGGCACATATTTGCTTTCGGGCTTTTCCTGTCACCTTTAGATACATTTCGACGTGTTATCAGAAACAAAACAACAGAACAGTTTTCGGGTTTGCCGTATATATATTCTCTGTTAAACTGCCTTATTTGCCTATGGTATGGCACACCTCTCATTTCTCCCAGAAACATGATGGTCGTGACTGTCAATTCAATCGGTGCGGTTTTTCAGTTAGTGTACATCATGCTCTTCATAGCATATGCTGAGAAGGGGAAAAAGATAAAAATGCTAGGATTGTTGCTTGCAGTCTTTGGCCTTTTTATAGTTATTGTTGTTGGGAGCTTACAAATAACTGACCTCCCTTTGCGACGGAACGTTGTCGGGATTTTGAGTTGTGCATCTCTCGTTTCAATGTTCGCTTCTCCCTTGTTTATTATCAATTTGGTGATTCGAACAAAGAGTGTGGAGTTTATGCCATTTTATCTCTCCCTTTCGACCTTCCTCATGAGCATATCTTTCTTCCTTTATGGACTGTTCAATTACGACCTGTTCGTTTATGCCCCAAATGGGATAGGAGCCGTGTTGGGGATAGTTCAATTGGTGTTGTACTGCTACTACAGTCGAGTTGCCAAAGAGGAGTCTAGAGAACCTTTAATCGACAGTGTGGAAACGGGAGAACATTTTTACGTTTACCACAGGAACCCCAAATTTCCGAGGGTTGATAATTTGATCTTCCACAGCGTTGGTGTGCAGTTCGGCATTAGCCAACGAGCCGCTTTCGGGCTGCGCCTTGTGATTTTAAAAGCTTTGTTCTATGGCTCTGCTGCTGCCTCTATGATTTTGTCTACAAGCTGTTTGGACAAAGAATGA 3726 43.69 MPGNKYNGNSNDISDRIPGRVERLLRERKLRKSCKDSYSNEVNDYIKESELIENDLRLKEEETVGIPCKFSEASVASRAFAEGCDKQDGKPPRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALTEALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKEHNRKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSDRFIRALKIPEVQEHIEELKERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTTVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDAKKGVLILSEFAGAAQSLGAGALLVNPWNITEVAKSIDRALNMGAEEREKRHRHNFLHVTTHTAQEWAETFVSELNDTVVEAELRIRQCPPLLPFDNAIKHYEQSTNRLLILGFNSTLTEPVDTPERRGDQIREMDLKLHPELKEPLTAICNDPNTTVVILSGSDRTVLDDNFGEYDMWLAAENGMFLRFTRGDWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFELRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGSAIDRILGEIVHSKSMTTPIDYVLCVGHFLGKFMIVPYLFASPPTHSNYSCHQDEDVYTFFEPELPSDTIGMARTKGTDGLKLTGERRPSINVPLNRNGSKSPHNKGRSSSEKKTSNHNCANGRKPSPEKIQWNVLDLKAENYFSCAVGRSRTNARYLLGSSDDVVTFLKKLMVLLGSIFSICRDAAGVAGHIFAFGLFLSPLDTFRRVIRNKTTEQFSGLPYIYSLLNCLICLWYGTPLISPRNMMVVTVNSIGAVFQLVYIMLFIAYAEKGKKIKMLGLLLAVFGLFIVIVVGSLQITDLPLRRNVVGILSCASLVSMFASPLFIINLVIRTKSVEFMPFYLSLSTFLMSISFFLYGLFNYDLFVYAPNGIGAVLGIVQLVLYCYYSRVAKEESREPLIDSVETGEHFYVYHRNPKFPRVDNLIFHSVGVQFGISQRAAFGLRLVILKALFYGSAAASMILSTSCLDKE 1241
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 32983854 33001699 - CrPI670011_11g021310.1 Cre11g2131 513876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g2131 1241 Coils Coil 42 62 - -
Cre11g2131 1241 CDD GT20_TPS 95 560 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Cre11g2131 1241 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 85 943 IPR001830 GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(PANTHER)|GO:0005992(InterPro)|GO:0070413(PANTHER)
Cre11g2131 1241 Pfam Trehalose-phosphatase 617 800 IPR003337 GO:0005992(InterPro)
Cre11g2131 1241 MobiDBLite consensus disorder prediction 861 875 - -
Cre11g2131 1241 CDD HAD_TPP 593 797 - -
Cre11g2131 1241 Pfam Glycosyltransferase family 20 95 560 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Cre11g2131 1241 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 94 563 - -
Cre11g2131 1241 Gene3D Glycogen Phosphorylase B; 87 341 - -
Cre11g2131 1241 Gene3D - 952 1045 - -
Cre11g2131 1241 Pfam Sugar efflux transporter for intercellular exchange 1078 1160 IPR004316 GO:0016020(InterPro)
Cre11g2131 1241 Pfam Sugar efflux transporter for intercellular exchange 958 1042 IPR004316 GO:0016020(InterPro)
Cre11g2131 1241 Gene3D - 1076 1169 - -
Cre11g2131 1241 FunFam Bidirectional sugar transporter SWEET 1075 1168 - -
Cre11g2131 1241 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 342 544 - -
Cre11g2131 1241 FunFam Alpha,alpha-trehalose-phosphate synthase 619 690 - -
Cre11g2131 1241 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 87 341 - -
Cre11g2131 1241 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 95 560 IPR012766 GO:0003825(InterPro)|GO:0005992(InterPro)
Cre11g2131 1241 SUPERFAMILY HAD-like 592 781 IPR036412 -
Cre11g2131 1241 MobiDBLite consensus disorder prediction 839 897 - -
Cre11g2131 1241 Gene3D Glycogen Phosphorylase B; 342 544 - -
Cre11g2131 1241 FunFam Bidirectional sugar transporter SWEET 955 1045 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g0616 Cre-Chr7:3955023 Cre11g2131 Cre-Chr11:32983854 2.70E-120 dispersed
Cre08g0596 Cre-Chr8:18906448 Cre11g2131 Cre-Chr11:32983854 6.20E-49 dispersed
Cre09g2448 Cre-Chr9:43831736 Cre11g2131 Cre-Chr11:32983854 2.70E-39 dispersed
Cre10g0401 Cre-Chr10:2861517 Cre11g2131 Cre-Chr11:32983854 5.80E-126 dispersed
Cre10g1574 Cre-Chr10:29752274 Cre11g2131 Cre-Chr11:32983854 4.10E-37 dispersed
Cre10g1575 Cre-Chr10:29767489 Cre11g2131 Cre-Chr11:32983854 1.10E-34 dispersed
Cre11g2131 Cre-Chr11:32983854 Cre03g0996 Cre-Chr3:8794596 0.00E+00 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g2131 K16055 - csv:101204478 1804.65