Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g2137 ATGCTGTTGGCTCGATTACTCGCCGTCGTTTTTTTCTCATCTCTCTGCTTCGTAACCCTCACTTCCGGAGCCGCTCTGTTGCCGGCCGACGAAGTGGAAGCGTTGAAGGAGATCGGAAGGACATTGGGGAAGACGGGGTGGGATTTCACCGCCGATCCATGCGGCGGCGTTAGTAGCGGTTGGGTATCGAATTCCAAACAATTCGACAATAATTTTGCTAATAATGTCACGTGCGACTGCACGTTCCAAAATAATACCGTCTGTCACGTCACCATCATTGTTCTGAAGGCGCAGAGCCTTCAAGGTACTCTGCCTCCGCAACTAGTGAGGTTGCCTTTCCTGCAGGAACTTGATCTCACTCGCAACTATCTCAGCGGCCCGATTCCTCCAGAATGGGGTTCAACCAAGCTTCTCAAAATTTCCCTTCTTGGAAATCGATTGACGGGTCCAATCCCAAAAGAGATTGGAAATATCACCACTCTTACAGACTTGGTTTTGGAAATGAATCATTTTTCTGGAAGTATACCTCCAGAACTTGGAAATTTGACCAACTTATCAAGATTACTTCTTACCTCAAACAACTTTTCTGGGGAGCTCCCACCTTCCTTGGCAAGGATAACCTCATTGACGGACTTAGCTATTCAGGCAAGCGGGTTGAGTGGGCCTATTCCTTCTGAAATTGGACTTTTGACAAAATTAACTGATGTGAGAATCAGCGACTTGAATGGAGGTTCATCGCCCTTTCCACCCCTCAATTCTTTGACAAAATTGAAAACCCTGATATTGAGGAGTTGCAATATAACTGGGATGCTACCCGACAATCTTGGTGGTTTGACATCATTGAAAATCTTAGACTTCAGCTTCAACAAAATTACTGGACCAATACCTGATAGCTTTGAAGCATTAAAAAAAGTGGATAGCATATATCTAACTGGAAACTTGCTAAACGGATCAGTTCCCATTTGGATGCTAGATCAAGGAGAAAGCATTGATCTCTCTTATAACAAGTTTACTCAGAGAAACTCTCAGAACACTGGTTGTCAATCACGAAATTTAAACCTATTTGCAAGCTCTTCACAGGACAATAATTCTGGAGCAGTCTCATGTTTAGGCACTTGTCAAAAAACTTGGTACTCTGTCCATATAAACTGCGGAGGGAATGAAGAATTAATTAATGGAACAACCAAATTTGATGCTGACGCAAACACTGGAAGATCATCATTGTTTTTTCAAGGTGGAGCAAATTGGGGATTTAGCAATACTGGCAATTTTATGGACGATGATCGCTCAACAGACGATTTTATTGCATTAAACTCATCTGCTCTCTCAATACCAAATCCTGAATTGTACATGAGGGCACGCATTTCTCCAATCTCTCTTACTTATTATGCATATTGCTTGGGTACTGGAAACTACACACTAAGCCTTCATTTTGCTGAGATAATGTTTACTAATGACAAAACATACAGTAGCCTTGGCAGACGCTTATTTGATGTTTACGTCCAGGGAAAGCTGGAGTTGAAGGATTTTAATATTGCAGATGCAGCAGGTGGTATTGGCAAACCTTTTGTAAAGAAATTCAAAGTTTCAGTGACTAATGGTACTGTAGAGATCCGCCTATTTTGGGCTGGAAAGGGGTCAAATGCAATCCCTGTGAGAGGAGTTTATGGTCCTCTAATTTCCGCTATTTCTGTTGATCCTGACTTTACGCCACCATCAGAAGGTGGAAATGCCATATCTGCCGGTGCAGTGGTTGGAATTGTGGTTGCTGTGGTCTTTGTTATCATCTTGGTTCTTGGAGTATTATGGTGGAGAGGCTGCCTAAGAAAGACAAGCACACTTGAACAAGAGTTGAAGGGTCTAGATCTAGGAACAGGTTCATTTTCATTAAGACAAATCAGAGCTGCTACTAACAATTTTGATGCTGCCAATAAGATTGGAGAAGGTGGTTTTGGTCCTGTTTACAAGGGTATTCTTGCAGATGGCACCGTAATTGCAGTGAAACAACTTTCTTCAAAATCAAAGCAAGGAAATCGTGAATTTGTGAATGAGATAGGCATGATATCTGCATTGCAGCACCCTCATCTAGTGAAGCTTTATGGATGTTGTATTGAAGGAAATCAACTTTTGCTAATATATGAGTATTTGGAAAACAATAGCCTTGCTCGGGCCTTATTTGGACCTGAAGAATGCCAACTGAAATTGGATTGGCCAACTAGGCAAAAGATTTGTGTTGGTATAGCTAGAGGTTTAGCATACCTTCACGAGGAGTCAAGACTTAAGATCGTTCACCGAGATATCAAAGCTACCAACGTTCTACTCGATAAAAATCTCAACCCCAAGATTTCCGACTTCGGTTTGGCGAAGCTGGATGAAGAAGAAAATACACATATCAGCACCCGGGTTGCTGGAACCTATGGGTATATGGCACCAGAATATGCCATGCGAGGCTACTTAACTGACAAGGCAGATGTGTACAGCTTTGGTATTGTGGCGTTGGAGATAGTTAGTGGTCGAAGCAACACAAGTTTCCGGACCAAGGATGATTGCTTTTACCTTCTTGACCATGCTAATACTTTAAAAGAGAAAGACCGTTTATTAGAGCTTGTCGATCCACGGTTAGGCTCTGATTTCAACAAGAGAGAGGCAATGACGATGATCAACATTGCTCTCCAATGTACAAACGTCGTTGCTGGTGACAGGCCTGCCATGTCATCAGTGGTGAGCATGCTGGAGGGGAAGGTTGTTGTGAAGGAGGTGGTTTCAGATCCCAGTGTCTCAAAACAAGATGTGAATGCAATGTGGAGCCAGATTTATCGCCAGAAAGGGGAAACAACGAGCCAGACGCAAAGTTTGACGATGGATGGACCATGGAGTGGTTCTTCAACAACTGCCAGTGATCTCTATCCCATCAACATGGATTCTAAATACTTGGAGAATAGGAACTAG 2949 42.83 MLLARLLAVVFFSSLCFVTLTSGAALLPADEVEALKEIGRTLGKTGWDFTADPCGGVSSGWVSNSKQFDNNFANNVTCDCTFQNNTVCHVTIIVLKAQSLQGTLPPQLVRLPFLQELDLTRNYLSGPIPPEWGSTKLLKISLLGNRLTGPIPKEIGNITTLTDLVLEMNHFSGSIPPELGNLTNLSRLLLTSNNFSGELPPSLARITSLTDLAIQASGLSGPIPSEIGLLTKLTDVRISDLNGGSSPFPPLNSLTKLKTLILRSCNITGMLPDNLGGLTSLKILDFSFNKITGPIPDSFEALKKVDSIYLTGNLLNGSVPIWMLDQGESIDLSYNKFTQRNSQNTGCQSRNLNLFASSSQDNNSGAVSCLGTCQKTWYSVHINCGGNEELINGTTKFDADANTGRSSLFFQGGANWGFSNTGNFMDDDRSTDDFIALNSSALSIPNPELYMRARISPISLTYYAYCLGTGNYTLSLHFAEIMFTNDKTYSSLGRRLFDVYVQGKLELKDFNIADAAGGIGKPFVKKFKVSVTNGTVEIRLFWAGKGSNAIPVRGVYGPLISAISVDPDFTPPSEGGNAISAGAVVGIVVAVVFVIILVLGVLWWRGCLRKTSTLEQELKGLDLGTGSFSLRQIRAATNNFDAANKIGEGGFGPVYKGILADGTVIAVKQLSSKSKQGNREFVNEIGMISALQHPHLVKLYGCCIEGNQLLLIYEYLENNSLARALFGPEECQLKLDWPTRQKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKNLNPKISDFGLAKLDEEENTHISTRVAGTYGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNTSFRTKDDCFYLLDHANTLKEKDRLLELVDPRLGSDFNKREAMTMINIALQCTNVVAGDRPAMSSVVSMLEGKVVVKEVVSDPSVSKQDVNAMWSQIYRQKGETTSQTQSLTMDGPWSGSSTTASDLYPINMDSKYLENRN 982
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 33063050 33075294 - CrPI670011_11g021370.1 Cre11g2137 513882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g2137 982 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 33 199 - -
Cre11g2137 982 SUPERFAMILY L domain-like 73 338 - -
Cre11g2137 982 ProSiteProfiles Protein kinase domain profile. 640 891 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g2137 982 SMART serkin_6 640 911 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g2137 982 MobiDBLite consensus disorder prediction 945 966 - -
Cre11g2137 982 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 11 927 IPR051824 -
Cre11g2137 982 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 609 715 - -
Cre11g2137 982 Gene3D Ribonuclease Inhibitor 28 241 IPR032675 -
Cre11g2137 982 Pfam Leucine rich repeat 256 315 IPR001611 GO:0005515(InterPro)
Cre11g2137 982 Gene3D Ribonuclease Inhibitor 242 356 IPR032675 -
Cre11g2137 982 CDD STKc_IRAK 646 911 - -
Cre11g2137 982 Pfam Leucine Rich Repeat 184 204 IPR001611 GO:0005515(InterPro)
Cre11g2137 982 Pfam Leucine Rich Repeat 114 133 IPR001611 GO:0005515(InterPro)
Cre11g2137 982 Pfam Leucine Rich Repeat 161 182 IPR001611 GO:0005515(InterPro)
Cre11g2137 982 Pfam Malectin domain 379 563 IPR021720 -
Cre11g2137 982 Gene3D Transferase(Phosphotransferase) domain 1 716 929 - -
Cre11g2137 982 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 377 568 - -
Cre11g2137 982 ProSitePatterns Serine/Threonine protein kinases active-site signature. 762 774 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g2137 982 Pfam Protein tyrosine and serine/threonine kinase 643 910 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g2137 982 Gene3D - 376 567 - -
Cre11g2137 982 SUPERFAMILY Protein kinase-like (PK-like) 624 934 IPR011009 -
Cre11g2137 982 Gene3D Phosphorylase Kinase; domain 1 607 715 - -
Cre11g2137 982 FunFam Putative LRR receptor-like serine/threonine-protein kinase 716 923 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0260 Cre-Chr1:1934774 Cre11g2137 Cre-Chr11:33063050 6.70E-211 dispersed
Cre03g0987 Cre-Chr3:8694909 Cre11g2137 Cre-Chr11:33063050 7.00E-200 dispersed
Cre11g2137 Cre-Chr11:33063050 Cre11g2139 Cre-Chr11:33100759 5.00E-195 dispersed
Cre11g2136 Cre-Chr11:33047180 Cre11g2137 Cre-Chr11:33063050 0.00E+00 tandem
Cre11g2137 Cre-Chr11:33063050 Cre11g2138 Cre-Chr11:33088320 1.10E-202 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64577 PF07714 PK_Tyr_Ser-Thr 2.80E-47 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g2137 - - - 0.0