Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g2139 ATGGATTTTTGTATTTGGAGATTGAAGAGTGTTTGTGTATTGCTGCTTTTCAGCTGCTTCTTCCACTTTAGATCTCATGCCCAACCTTTACCTCAACAAGAAGTGAGAGCCCTCGAAGAAATATCTACAAAGTTAAAGAACTTAAATTGGAAAGTGCATCAAAATTCTTGCATTAATGGCGATGGCTTTTCCAATCTATTTATCAGTTCCACTAATTTGAGAGAGGTCAATTGCACTTGTACCACTATTTGCCACGTCACCAGCATACGGCTAAAAGGTCTTAATCTAGTTGGAGTTCTGCCCGTAGAATTTGCAAATCTGACTCAACTCCGGGATTTTTCCATAATTGGAAACCGACTCAGCGGTGAGATTCCTCCTGAAATTGGTGATATTGTTTCACTTGAGGAACTGATCTTGGAAGACAATCAGATTGGAGGAAATCTTTCTGAAAATCTCGGAAAACTAACCAGCTTACGTCGATTACTTGTTTCTTCAAATAATATTACAGGGTCGATTCCAGAATCTTTTCGAAACTTGAGGAACTTGACTGAATTTCGGGTGGATGGAACTAACATATCAGGAAAGATACCTCAATATATTGGCAACTGGACCAAACTTCTTAAATTGGTCTTGAGAAATTGTTTAATCGAGGGTCGTATTCCTGAATATATTGGATCGTTTAATGAATTAAGAACTTTAGATCTAAGCTTCAACAGATTAAGTGGTCCAATTCCAGAAACATTTCAAAATCTATTCGTCCAAAAAACTGCCTTCATGTTTCTGCATAACAACTCCTTAATCGGGCAAGTACCGAGTTGGATTATTGCCCAAAGTGGCAGCAGCAATAGAAACATAGATTTATCTTACAACCATTTTACAGGAATAAGCGATTTCAGTTGTACACAGTCTAATAATATTAACTTGGTTTCAAGTTCTACCGCAAAGAATAAAAGTGATGGTTGGTGCCAAATGAAGGATCTCCCTTGCTCTACAAAACCTCAATTTGATTCATTGTTCATTAATTGTGGAGGAGGAAGTATGGAATTTAATGGTAGTAGATATGAAGGGGATGATACTCAAGGTGGGAAAGCCAATTTCTTTTTCTCAACACAAAGATGGGGTTACACTACTACTGGTGTTTCATTGCTAAATGATCACCTTCCTTTCAAACTGTCATCTACCAATTCCTCTGTTTCTTCTTCTTCACCAACCCTCTATTCCACTGCTAGAGTTTCCCCTCTTTCTCTCAATTACTATGGCCTTTGCCTCATCAGTGGAAGCTACAATGTCAAGCTTCACTTTGCTGAAATTTTGTTTACTCCTGACCAAACTTATACCAGCCTCGGAAGACGTATTTTCGATATCTCCATTCAAGGAAAGTTGATTAAGAAGGATTTTAACATAGTGGAGGAAGCTGGAGGTGTTGGTAAAGAGTTTATTTTAGAAGTGCCTAATGTTATGGTCAATAATGGAAGTAGTACTCTTGAGATCTCCTTGTATTGGGCTGGTAAAGGAACAATTTACATTCCATACTTAGGGGTTCATGGACCTCTGATATCTGCAATCACCGTCACACCAAACTTCAAAGTGGAAACTAATGTGGAAACTAGAGGGCTACCGGCTGGAGCTATTGCTGGCATTGTTGTTGGTATTTTCGTCTTTGTCGTCCTAGTATTTGTTGTTCTTCGATGGAAGGGTTATTTAGGCGGAAAGGAAACCGAAGACGATGAACTTCGAGACTTGAAATTACAAACAGGTTATTTCAGTTTAAGACAAATCAAAGCAGCCACCAACAGCTTTGACTCTGCTAATAAGATTGGGGAGGGAGGCTTTGGTCCTGTCTACAAGGGAGTACTATCAGATGGCACTTCAATTGCTGTAAAACAACTATCTTCTAAATCAAGACAAGGGAATCGTGAATTCATCACAGAAATTGGGATGATTTCTGCATTACAACATCCAAATCTTGTTAAGCTTTATGGTTGCTGTATTGAAGGAAACCAATTGTTGCTTATTTATGAGTATCTACAGAACAATAATCTTGCTCGAGCACTTTTTAGCCCTGAGAAACATTCCTTGCATTTGGATTGGCCAATAAGAATGAAGATATGTTTGGGAATAGCAAAAGGGTTGGCTTACCTTCATGAAGAATCAAGATTGAAAATTGTTCATAGAGATATAAAAGCTACTAATGTTCTACTTGATGGAAACTTGAATGCCAAGATCTCTGATTTTGGGTTGGCTAAGCTTGATGAAGAGGAGAATACTCATATTAGCACAAGAATTGCTGGCACAATTGGTTATATGGCTCCTGAATACGCAATGAGGGGTTATTTGACTGATAAGGCTGACGTTTATAGCTTTGGAGTGGTGGCATTAGAGATTGTTAGTGGTAAAAGTAATACGAATTACAGACCGAAAGAGGAATTTGTTTATCTTCTTGATTGGGCTTGTGTTCTACAAGAGGAAGGGAACTTACTTGAACTTGTTGATCCAAATCTTGGCTCACATTACTCAAAAGAGGAGGTCATGAGGATGCTTCATATAGCTCTCTTGTGCACAAACTTGTCTCCAAGTCTCAGACCATCCATGTCTTCTGTGGTTAGCATGCTGGAAGGTAAAATCGCAGTCGAAGTATCGAACATCAAGCGCAACACGACCGGTCAAGATGCAAGGTTCAAAGCATTTGATCACAAACTGTCACGAGATAGCCTAACAAGCATTTCGACCTCGTCGCAATTGCAAGGCATTGAGACGCAAAAAAGCATGTTAATGGATGGGTCATGGATTGACTCATCATCTACTTCTACTCAAGACAGAGACAATGCTCGAGAGCATTCTTCAACAAGAAGTCTCCTTACAGATTCATTCTAA 2874 39.0 MDFCIWRLKSVCVLLLFSCFFHFRSHAQPLPQQEVRALEEISTKLKNLNWKVHQNSCINGDGFSNLFISSTNLREVNCTCTTICHVTSIRLKGLNLVGVLPVEFANLTQLRDFSIIGNRLSGEIPPEIGDIVSLEELILEDNQIGGNLSENLGKLTSLRRLLVSSNNITGSIPESFRNLRNLTEFRVDGTNISGKIPQYIGNWTKLLKLVLRNCLIEGRIPEYIGSFNELRTLDLSFNRLSGPIPETFQNLFVQKTAFMFLHNNSLIGQVPSWIIAQSGSSNRNIDLSYNHFTGISDFSCTQSNNINLVSSSTAKNKSDGWCQMKDLPCSTKPQFDSLFINCGGGSMEFNGSRYEGDDTQGGKANFFFSTQRWGYTTTGVSLLNDHLPFKLSSTNSSVSSSSPTLYSTARVSPLSLNYYGLCLISGSYNVKLHFAEILFTPDQTYTSLGRRIFDISIQGKLIKKDFNIVEEAGGVGKEFILEVPNVMVNNGSSTLEISLYWAGKGTIYIPYLGVHGPLISAITVTPNFKVETNVETRGLPAGAIAGIVVGIFVFVVLVFVVLRWKGYLGGKETEDDELRDLKLQTGYFSLRQIKAATNSFDSANKIGEGGFGPVYKGVLSDGTSIAVKQLSSKSRQGNREFITEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLQNNNLARALFSPEKHSLHLDWPIRMKICLGIAKGLAYLHEESRLKIVHRDIKATNVLLDGNLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWACVLQEEGNLLELVDPNLGSHYSKEEVMRMLHIALLCTNLSPSLRPSMSSVVSMLEGKIAVEVSNIKRNTTGQDARFKAFDHKLSRDSLTSISTSSQLQGIETQKSMLMDGSWIDSSSTSTQDRDNAREHSSTRSLLTDSF 957
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 33100759 33112383 + CrPI670011_11g021390.1 Cre11g2139 513884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g2139 957 Gene3D Phosphorylase Kinase; domain 1 569 675 - -
Cre11g2139 957 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 569 675 - -
Cre11g2139 957 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 13 895 IPR051824 -
Cre11g2139 957 ProSitePatterns Serine/Threonine protein kinases active-site signature. 722 734 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g2139 957 SUPERFAMILY Protein kinase-like (PK-like) 584 875 IPR011009 -
Cre11g2139 957 Pfam Protein tyrosine and serine/threonine kinase 603 870 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g2139 957 FunFam Putative LRR receptor-like serine/threonine-protein kinase 676 883 - -
Cre11g2139 957 Gene3D - 337 527 - -
Cre11g2139 957 SMART serkin_6 600 871 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g2139 957 SUPERFAMILY L domain-like 64 322 - -
Cre11g2139 957 Gene3D Ribonuclease Inhibitor 194 324 IPR032675 -
Cre11g2139 957 Pfam Leucine Rich Repeat 157 179 IPR001611 GO:0005515(InterPro)
Cre11g2139 957 Pfam Leucine Rich Repeat 230 251 IPR001611 GO:0005515(InterPro)
Cre11g2139 957 FunFam Leucine-rich repeat receptor protein kinase EMS1 173 273 - -
Cre11g2139 957 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 79 172 - -
Cre11g2139 957 MobiDBLite consensus disorder prediction 928 957 - -
Cre11g2139 957 Pfam Malectin domain 338 522 IPR021720 -
Cre11g2139 957 Gene3D Transferase(Phosphotransferase) domain 1 676 895 - -
Cre11g2139 957 Gene3D Ribonuclease Inhibitor 32 193 IPR032675 -
Cre11g2139 957 ProSiteProfiles Protein kinase domain profile. 600 875 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g2139 957 CDD STKc_IRAK 606 873 - -
Cre11g2139 957 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 335 527 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre11g2137 Cre-Chr11:33063050 Cre11g2139 Cre-Chr11:33100759 5.00E-195 dispersed
Cre11g2138 Cre-Chr11:33088320 Cre11g2139 Cre-Chr11:33100759 1.5e-311 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64579 PF07714 PK_Tyr_Ser-Thr 2.70E-49 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g2139 - - - 0.0