Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g2154 ATGAATCCCTACTCCGAGAAAACACTCACAGAAGAGGTTCTCTATCTTCACTCTCTCTGGCGTCGAGGCCCGCCGAGGAACCCTAAACCCACTCACAACCATTCATCCACCGTCGTCGCCGCTGCCGCGAATCGGAACCCCTCCAACAAGAGACCTAGAGATCCAAAGAATCGAAAGAACAAGAAGAAAAAACCACGCCCCGAGCCACCGCAACACTCCGGCCCCGAGTGGCCCTGTCCGGAGCCGGTTCAATATCAGCTCTCCACGTCATCTGGGTGGCCGTCAATTGAGCCTGTTGCCACTCCGGCGCCTCAGCCTGTGTCTTCTGAAGAGCGAGCAAATTTTGCGGCGTTGCAATTGCAGTACAAGGGTTCCGAGGCTTGCCGGGGATTTTTCGCTAGAAATGCCGATTCGGGGAGCGACGAAGAGGAGGAGGAGGAGGAGGAAGCTGAGGGCAATGATGGGGAAATGATGGAAAGTGAAGAATATAAATTCTTTTTGAAGATGTTTGTGGAGAATGACGAACTTAGGGGTTATTACGAGAAGAATTCTGAAAGTGGGTTGTTTTGTTGCTTGGTTTGTGGTGGAATGGGGAGAAAGAAATCTGGGAAAAGGTTTAAGAACTGCGTTGGGCTTGTTCAACATTCGATTTCGATATCGAGGACGAAGAAGAAGCAGGCTCATAGGGCTTTTGGGCAGGTCGTATGCAGGGTTTTTGGTTGGGATATTAATCGACTTCCGACGATTGTGTTGAAGGGCGAGCCCCTTGGTCGATCATTAGCCAATTCTGGAGACTTGAAGGTTCAGCCAGAGGAAAATCATGTGGCTAAAGAGCATGATGACATTGATAAGAAGAATGAAGTGGTTTCAGTGGATGAGAATGAACAGAAATTGGAGGAAGAAAAGGCAGCTGAAGATCCTACTTCTAATGCTAAAGATGTGAGTTCTGGAGAGAATGATGATGCCTGCAAAGATAACGATGTCAAACTGCAAGCAAAAAATACAGATAATTCAATATCAGGCATGGGAGAAAGCAATACAGAAATGGATAATTTGCCTGTGTCAGAGTCGATTTTGAAAGCATGTAAAGAATTTTTTGCAGCCTTCTTTACATCTATGAGCGACGATGATGTTAGTGAAAACAACTTAATCGACGGAGATAGAGTTGAGGAATGCAAAGAGTTCAAATTCTTTTTAAAGTTGTTCATCAAGAACGAAAGCTTGAGAAGATATTACGAGAACAAATATGATGATGGAGAATTTTTCTGTTTAGCTTGTGAAGGAGCAGGAAAGAAAATGTTAAATAGTTTTAAGACATGTGGCCGCCTTCTCCAGCATACAACTTCTCTAGGGAAGAGCAAAATGGGGAAAAAACCGGTTCAGAAGCCTCACATTGCTAAAATGTTGAAAATGAAAATGCTGGCTCATAGGGCATATAGTTTAGTTATATGTAAGGTTCTTGGTTGGGACATTGAAAAGCTTCCTGCAGTCGTGTTAAAAGGCAAAGCTCTTGGTCGTTCCTTAACGAAGTCAGACGTGTCAAAGTTACAGGACGAATCTGTTGGCAATGCAATTGATAATACGACGGAAGCGGATGTTCCTGTAGAAGACGACTGTACAAAGATTAAGGAAATATAA 1638 44.38 MNPYSEKTLTEEVLYLHSLWRRGPPRNPKPTHNHSSTVVAAAANRNPSNKRPRDPKNRKNKKKKPRPEPPQHSGPEWPCPEPVQYQLSTSSGWPSIEPVATPAPQPVSSEERANFAALQLQYKGSEACRGFFARNADSGSDEEEEEEEEAEGNDGEMMESEEYKFFLKMFVENDELRGYYEKNSESGLFCCLVCGGMGRKKSGKRFKNCVGLVQHSISISRTKKKQAHRAFGQVVCRVFGWDINRLPTIVLKGEPLGRSLANSGDLKVQPEENHVAKEHDDIDKKNEVVSVDENEQKLEEEKAAEDPTSNAKDVSSGENDDACKDNDVKLQAKNTDNSISGMGESNTEMDNLPVSESILKACKEFFAAFFTSMSDDDVSENNLIDGDRVEECKEFKFFLKLFIKNESLRRYYENKYDDGEFFCLACEGAGKKMLNSFKTCGRLLQHTTSLGKSKMGKKPVQKPHIAKMLKMKMLAHRAYSLVICKVLGWDIEKLPAVVLKGKALGRSLTKSDVSKLQDESVGNAIDNTTEADVPVEDDCTKIKEI 545
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 33213460 33215742 - CrPI670011_11g021540.1 Cre11g2154 513899

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g2154 545 MobiDBLite consensus disorder prediction 29 44 - -
Cre11g2154 545 PANTHER OS06G0153600 PROTEIN 1 347 - -
Cre11g2154 545 MobiDBLite consensus disorder prediction 139 156 - -
Cre11g2154 545 MobiDBLite consensus disorder prediction 21 110 - -
Cre11g2154 545 MobiDBLite consensus disorder prediction 52 66 - -
Cre11g2154 545 MobiDBLite consensus disorder prediction 134 157 - -
Cre11g2154 545 MobiDBLite consensus disorder prediction 262 327 - -
Cre11g2154 545 MobiDBLite consensus disorder prediction 270 308 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g2154 - - - - 0.0
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g108 . . . . . Bpe08g00983 . . . . . Cma09g00823 . Car09g00741 . . . Bhi09g03516 . . . . . . Cla11g01708 Cam11g1776 Cec11g1797 Cco11g1802 Clacu11g1935 Cmu11g1746 Cre11g2154 Cone6ag0196 . . . Lsi04g02010 Csa04g02283 Chy07g00020 Cme07g00534 . . . . . . Bma07g01166 . . . Cmo09g00818 . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008090 1 5 0 1 1 0 1 1 0 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 32