Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g2191 ATGCGAATCCTCCTATACATGTTGGACTTGACATTTATTCATAAAACGAGTACAAAGGAGGAAGAGATCTATGGTGTTATTGCTCAGAATAAATCAGTTCCTCCTAATGTTCTTTTGAATCGCATTCTTGGTGTTTCTCATTATGTTAGCCTGTCGCCATTGCGTATCTTAGTTCCTCCAACCCGTCATATGTCTTATGTTGACACCCACTTGCTTTACTTCGGGTTCAAGGGCTGCTGCGCATTATCTAATGTTTATATCAATTGTTCTTTTCATGAATTTGGATTCTGTTTCGTTGTCAAATCCATGGGTTTGGTTGAGGCAGTGGCAGCAAGATTTAGTTCTTTGGAGCTTATTGGAAGAGGATCTTTTGGTGATGTCTACAAGGGGTTTGACAAGGAGCTTAACAAAGAAGTTGCTATCAAAGTTATTGATTTGGAAGAATCTGAGGATGAAATTGAGGATATTCAAAAGGAAATTTCTGTTTTGTCACAATGTCGATCACCCTACATTACTGAGTACTATGGTTCTTATCTCCACCAGACTAAATTATGGATAATAATGGAATATATGGCTGGTGGCTCTGTTGCAGATCTGCTTCAGTCTGGGCCGCCGCTTGATGAAATGTCAATTGCATGCATTTTACGGGATTTGCTGCATGCAATTGATTATTTGCACAGTGAAGGAAAAATTCACAGGGACATTAAAGCGGCAAACATTTTACTGAGTGAAAATGGTGATGTTAAGGTTGCAGATTTTGGTGTTTCTGCTCAATTAACAAGGACAATATCAAGGAGAAAGACATTTGTAGGAACTCCATTCTGGATGGCGCCAGAGGTAATTCAGAACTCTGAAGGATACAATGAGAAGGCAGACATCTGGTCTCTAGGAATCACTGCTATTGAAATGGCAAAAGGGGAGCCTCCACTTGCTGATCTTCATCCCATGAGAGTTCTTTTTATCATACCTCGAGAAAATCCACCTCAGTTGGATGAACATTTTTCTCGCCCTATGAAAGAATTAGTGTCACTGTGTCTGAAGAAAATACCTGCTGAGAGACCCAGTGCAAAAGAGCTTCTGAAGCACCGATTCATTAAGAATGCCAGGAAGAGTCCCAGGCTTCAGGAGAGAATAAGAGAACGTCCGAAGTACCAAATAAAGGAAGAAGATGCAGAAACACCAACAAATGGTCCTAGAGCTATAGGTGAAACGTCAGACACTGTGAAAGTATCAAGAAATGTAAGAGATGAAACTGTTCGTGCCAGCAACCAGAGTAAAGCTCCAAAGAATGCTGGATGGGACTTTAGTATTGGGGGACCACATAGTACAGGTACTGTTCGAAGTGTAGTAAAACCACCTCAAATTAGGGAAAGAAAACCAGAAATTCCTTATGGTCAGGCTGCACCTAGTAGAGTTGCAGAGAGTGGTAACTGGCTAGCTGCGTCTGGAAATGCACCACGCGACATATCAGAGAACACTAGAGATTCATACAGTATGGGAGATGCTAGTGAAGATGAAGAGTTAAGTGGTTCAGGAACTGTTGTGATCCGGTCTCCCAGGGGATCTCAAGCATCTACTCAATTTCATAATGAAAGCAGTCCGTCTGGAAGTGCACAAGCATATTTTGAGGACACATCTTTTAGTGGTACTGTTGTTATGCGTGGACAACGTGATGATTCTGATTCTCCCCAGACTCCAAAATCCAGATTGGGAATTCAAGAAAGGACTTCAAGTTTGTCTCCTGAAGACAGTGCATCAAACCTTGCCGAGGCAAAAGCTGCAATTCAAGCAGGATTGAGAAAAGCTAATGCAAGAGATAGATCAGCTATCAATAAACTCAACGACAGGAAGGAAAACAGAAGAACAGAGCAAACAGTGAGTAGCTCTGACTCTTCAAGGCATTCTCGTGAATTTTTTGATGCGCCACGAGCATTGCTAAAACCATCTCTATCGATTGATGAGGAAGAAAGTGCAAAAATAGCATCGTCTTCTGCACCATTATCGGTTTTGTTTATGTCATCCTTGAAAGAGGTATTTGCAGATGATTCGGAAGGATTGCCTGCTCGTACTGTAATCAATGCACTTATCAATATGGAACACCAAAAACTTGGATCATGTGAGGTTCTTGTTACCAAGTTGCTCCAGAAATTGGCCAGTTCCAAGGAATCTTCACTGAAAGATTTACAAGACTTGGCAACTCGCTTATTCACTAAGGCAAAGACAGTTCCTGAAAATACACAAAATGTCACGGATTCTGATAGCAGCAAAAAGCAACCGAACAGGGAACTTCATTCAAATTCTAATTTGAGCTCGCTTGCTAGATTTTTACTCTCCAGATGGCAAGGTCAGGTGTCAAGGGATCTGAGTCCAGCTTAA 2376 41.41 MRILLYMLDLTFIHKTSTKEEEIYGVIAQNKSVPPNVLLNRILGVSHYVSLSPLRILVPPTRHMSYVDTHLLYFGFKGCCALSNVYINCSFHEFGFCFVVKSMGLVEAVAARFSSLELIGRGSFGDVYKGFDKELNKEVAIKVIDLEESEDEIEDIQKEISVLSQCRSPYITEYYGSYLHQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAIDYLHSEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPMKELVSLCLKKIPAERPSAKELLKHRFIKNARKSPRLQERIRERPKYQIKEEDAETPTNGPRAIGETSDTVKVSRNVRDETVRASNQSKAPKNAGWDFSIGGPHSTGTVRSVVKPPQIRERKPEIPYGQAAPSRVAESGNWLAASGNAPRDISENTRDSYSMGDASEDEELSGSGTVVIRSPRGSQASTQFHNESSPSGSAQAYFEDTSFSGTVVMRGQRDDSDSPQTPKSRLGIQERTSSLSPEDSASNLAEAKAAIQAGLRKANARDRSAINKLNDRKENRRTEQTVSSSDSSRHSREFFDAPRALLKPSLSIDEEESAKIASSSAPLSVLFMSSLKEVFADDSEGLPARTVINALINMEHQKLGSCEVLVTKLLQKLASSKESSLKDLQDLATRLFTKAKTVPENTQNVTDSDSSKKQPNRELHSNSNLSSLARFLLSRWQGQVSRDLSPA 791
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 33593124 33608509 - CrPI670011_11g021910.1 Cre11g2191 513936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g2191 791 SUPERFAMILY Protein kinase-like (PK-like) 111 397 IPR011009 -
Cre11g2191 791 Gene3D Transferase(Phosphotransferase) domain 1 110 400 - -
Cre11g2191 791 MobiDBLite consensus disorder prediction 379 540 - -
Cre11g2191 791 ProSiteProfiles Protein kinase domain profile. 113 365 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g2191 791 MobiDBLite consensus disorder prediction 605 624 - -
Cre11g2191 791 Pfam Protein kinase domain 114 365 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g2191 791 MobiDBLite consensus disorder prediction 553 586 - -
Cre11g2191 791 MobiDBLite consensus disorder prediction 515 540 - -
Cre11g2191 791 MobiDBLite consensus disorder prediction 742 767 - -
Cre11g2191 791 MobiDBLite consensus disorder prediction 599 636 - -
Cre11g2191 791 CDD STKc_MST3_like 112 385 - -
Cre11g2191 791 FunFam serine/threonine-protein kinase dst1 isoform X1 110 399 - -
Cre11g2191 791 Coils Coil 139 166 - -
Cre11g2191 791 MobiDBLite consensus disorder prediction 379 394 - -
Cre11g2191 791 MobiDBLite consensus disorder prediction 553 585 - -
Cre11g2191 791 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 111 758 IPR050629 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)
Cre11g2191 791 SMART serkin_6 113 365 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g2191 791 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g0552 Cre-Chr5:4904613 Cre11g2191 Cre-Chr11:33593124 2.80E-54 dispersed
Cre06g1433 Cre-Chr6:8671485 Cre11g2191 Cre-Chr11:33593124 4.20E-20 dispersed
Cre09g2066 Cre-Chr9:39714244 Cre11g2191 Cre-Chr11:33593124 1.30E-53 dispersed
Cre10g1342 Cre-Chr10:27000420 Cre11g2191 Cre-Chr11:33593124 1.20E-40 dispersed
Cre11g1591 Cre-Chr11:26097022 Cre11g2191 Cre-Chr11:33593124 1.10E-70 dispersed
Cre11g2191 Cre-Chr11:33593124 Cre10g1444 Cre-Chr10:28245196 2.70E-29 dispersed
Cre11g2191 Cre-Chr11:33593124 Cre05g1007 Cre-Chr5:9296725 2.20E-52 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64580 PF00069 Pkinase 2.90E-68 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g2191 K08838 - csv:101214412 1255.35