Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre11g2195 | ATGACTGGGAAAGAGATTCTCCACAAGATGAAGGAAAAAGTTGGGCTATGTTCCTCGGATCCAGACTCGGGAAAAGGAAAGAGCAAGATGTCCAAGCATGTCACACATGGTTTTCACTTGGTGGAAGGGAAATCAAATCATGCCATGGAAGATTATGTTGTTGCAGAGTTTAAGCATGTTGATCATCATGAGCTTGGTTTATTTGCAATCTTCGATGGCCATTTGAGCAATTCTATTCCTGATTATCTACAATCACATTTATTTTCTAATATTATAAATGAGCCTGATTTCTGGACCGATCCAAAGAACGCAGTCAGGAAAGCATACGAGGAAACTGATGCTTACATTTTAGAGAAAGCTGTTGATTTTAGTCATGGGGGTTCAACTGCTGTTACGGCCATATTGATAGACTGTAAGACACTAGTAGTGGGCAATGTGGGGGACTCCCGTGCAGTTATCTGTAGTAAAGGCAAGGCCAGACAATTATCAATCGATCATGAGCCGAGCTTTGAGAGAAAAAGCATTGAGGAAAGAGGTGGTTTTGTATCAAACTTTCCTGGAGATGTTCCGCGTGTTGATGGGCAGTTGGCAGTCGCAAGGGCGTTTGGTGATAGGAGCTTAAAGAAACATTTGAGTTCAGAGCCTTATGTGGTAATGGAGATGATAGATGACGAGACCGAATTTGTTATCTTGGCAAGTGATGGATTGTGGAAGGTTATGTCAAATGAAGAAGCGGTAGACTCGATCAGGCATATAAAAGACGCGCATGCAGCTGCCAAACACCTGACAGAGGAGGCCCTCAAGAGGAAGAGCAAAGATGATATCTCTTGTATAGTTGTGAGATTTCACTGA | 852 | 42.61 | MTGKEILHKMKEKVGLCSSDPDSGKGKSKMSKHVTHGFHLVEGKSNHAMEDYVVAEFKHVDHHELGLFAIFDGHLSNSIPDYLQSHLFSNIINEPDFWTDPKNAVRKAYEETDAYILEKAVDFSHGGSTAVTAILIDCKTLVVGNVGDSRAVICSKGKARQLSIDHEPSFERKSIEERGGFVSNFPGDVPRVDGQLAVARAFGDRSLKKHLSSEPYVVMEMIDDETEFVILASDGLWKVMSNEEAVDSIRHIKDAHAAAKHLTEEALKRKSKDDISCIVVRFH | 283 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 33662839 | 33665311 | + | CrPI670011_11g021950.1 | Cre11g2195 | 513940 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre11g2195 | 283 | PANTHER | PROTEIN PHOSPHATASE | 31 | 280 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cre11g2195 | 283 | FunFam | Probable protein phosphatase 2C 39 | 25 | 283 | - | - | |
Cre11g2195 | 283 | SMART | PP2C_4 | 31 | 280 | IPR001932 | - | |
Cre11g2195 | 283 | SUPERFAMILY | PP2C-like | 31 | 283 | IPR036457 | - | |
Cre11g2195 | 283 | ProSiteProfiles | PPM-type phosphatase domain profile. | 35 | 282 | IPR001932 | - | |
Cre11g2195 | 283 | Pfam | Protein phosphatase 2C | 47 | 275 | IPR001932 | - | |
Cre11g2195 | 283 | CDD | PP2Cc | 43 | 282 | IPR001932 | - | |
Cre11g2195 | 283 | Gene3D | - | 16 | 283 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre10g1094 | Cre-Chr10:21739945 | Cre11g2195 | Cre-Chr11:33662839 | 6.00E-85 | dispersed | |
Cre11g1393 | Cre-Chr11:17786343 | Cre11g2195 | Cre-Chr11:33662839 | 9.00E-18 | dispersed | |
Cre11g1835 | Cre-Chr11:29988373 | Cre11g2195 | Cre-Chr11:33662839 | 5.20E-86 | dispersed | |
Cre11g2195 | Cre-Chr11:33662839 | Cre07g0608 | Cre-Chr7:3891444 | 1.30E-100 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre11g2195 | K17506 | - | csv:101215129 | 533.872 |