Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g2195 ATGACTGGGAAAGAGATTCTCCACAAGATGAAGGAAAAAGTTGGGCTATGTTCCTCGGATCCAGACTCGGGAAAAGGAAAGAGCAAGATGTCCAAGCATGTCACACATGGTTTTCACTTGGTGGAAGGGAAATCAAATCATGCCATGGAAGATTATGTTGTTGCAGAGTTTAAGCATGTTGATCATCATGAGCTTGGTTTATTTGCAATCTTCGATGGCCATTTGAGCAATTCTATTCCTGATTATCTACAATCACATTTATTTTCTAATATTATAAATGAGCCTGATTTCTGGACCGATCCAAAGAACGCAGTCAGGAAAGCATACGAGGAAACTGATGCTTACATTTTAGAGAAAGCTGTTGATTTTAGTCATGGGGGTTCAACTGCTGTTACGGCCATATTGATAGACTGTAAGACACTAGTAGTGGGCAATGTGGGGGACTCCCGTGCAGTTATCTGTAGTAAAGGCAAGGCCAGACAATTATCAATCGATCATGAGCCGAGCTTTGAGAGAAAAAGCATTGAGGAAAGAGGTGGTTTTGTATCAAACTTTCCTGGAGATGTTCCGCGTGTTGATGGGCAGTTGGCAGTCGCAAGGGCGTTTGGTGATAGGAGCTTAAAGAAACATTTGAGTTCAGAGCCTTATGTGGTAATGGAGATGATAGATGACGAGACCGAATTTGTTATCTTGGCAAGTGATGGATTGTGGAAGGTTATGTCAAATGAAGAAGCGGTAGACTCGATCAGGCATATAAAAGACGCGCATGCAGCTGCCAAACACCTGACAGAGGAGGCCCTCAAGAGGAAGAGCAAAGATGATATCTCTTGTATAGTTGTGAGATTTCACTGA 852 42.61 MTGKEILHKMKEKVGLCSSDPDSGKGKSKMSKHVTHGFHLVEGKSNHAMEDYVVAEFKHVDHHELGLFAIFDGHLSNSIPDYLQSHLFSNIINEPDFWTDPKNAVRKAYEETDAYILEKAVDFSHGGSTAVTAILIDCKTLVVGNVGDSRAVICSKGKARQLSIDHEPSFERKSIEERGGFVSNFPGDVPRVDGQLAVARAFGDRSLKKHLSSEPYVVMEMIDDETEFVILASDGLWKVMSNEEAVDSIRHIKDAHAAAKHLTEEALKRKSKDDISCIVVRFH 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 33662839 33665311 + CrPI670011_11g021950.1 Cre11g2195 513940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g2195 283 PANTHER PROTEIN PHOSPHATASE 31 280 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cre11g2195 283 FunFam Probable protein phosphatase 2C 39 25 283 - -
Cre11g2195 283 SMART PP2C_4 31 280 IPR001932 -
Cre11g2195 283 SUPERFAMILY PP2C-like 31 283 IPR036457 -
Cre11g2195 283 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
Cre11g2195 283 Pfam Protein phosphatase 2C 47 275 IPR001932 -
Cre11g2195 283 CDD PP2Cc 43 282 IPR001932 -
Cre11g2195 283 Gene3D - 16 283 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre10g1094 Cre-Chr10:21739945 Cre11g2195 Cre-Chr11:33662839 6.00E-85 dispersed
Cre11g1393 Cre-Chr11:17786343 Cre11g2195 Cre-Chr11:33662839 9.00E-18 dispersed
Cre11g1835 Cre-Chr11:29988373 Cre11g2195 Cre-Chr11:33662839 5.20E-86 dispersed
Cre11g2195 Cre-Chr11:33662839 Cre07g0608 Cre-Chr7:3891444 1.30E-100 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g2195 K17506 - csv:101215129 533.872