Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g2237 ATGGTGAAAATGAAGTTTGTTTCCATGTCTATGGTTATGTCTGTCGTCTTGTTCATGTGTATTGGATCTTACGCCTCTTTCACTCCCATTGATAACTATTTGATATCGTGTGGTTCTACACAAAACATCACCTTCCAAGGGAGAACTTTTGTTCCTGATTCTGGACATTCATTGCTCTCCAATGATGGTGAAAGCTCTGTTGTTGTTAGTTCAAAAGGCACTACTGCTCCATCTCCAATCTATCAATCTGCTCGGGTTTTCACGAGCATTTCTTCGTATAAATTCGAAATCAAGAAAGAAGGCCGGCATTGGGTTCGATTGTATTTTTATCCTATTCCAAAGTCAGAGAGGAATCTTGCATCTGCATCGATTACTGTTGTTACTGAGAAGTTTGTGCTGTTGAACAACTTCACTTTCAAGAACTACAATGGTTCTTTTATGTTCAAGGAGTATGCAATCAATGTCACTTCAGATTCCTTGACCCTTACTTTCATTCCGTCCAATGGTTCTGTTTCATTTGTTAATGCGATTGAAGTTGTCTCGGTGCCTGATGAGCTGATACCTGACCAAGCATTGGCTTTGAATCCATCTGCTCCTTTTAGCGGTATCTCGGAACTTGCTTTTGAAACTGTTTACCGGCTGAATATGGGGGGTCCTTTACTCACTTCACAAAATGATACGCTTGGAAGGACTTGGGAGAATGATATGAAATACCTCCATGTCAACAGTTCTGCAGTGAATGTCTCTGCCAACCCCAGGAGCATAAAATATCATGCCGGTGTGACACCAGAAACTGCACCAAATTGGGTTTATGCGACTGCCGATGCCATGGGAGACCCAAATGTACCGAACGTGAACTTCAACTTGACTTGGGTTTTCTCTGTTGAGCCAAATTTTCAATATTTTGTCAGAGTGCACTTTTGTGATATAATGAGCAAGGCTCTCAATAATCTGGTTTTCAATCTTTACATCAATTCTGATAATGCTCTGGGAAGCTTTGATCTATCGTCGTTAACCGGTGACTTAGGTGTGCCTTATTACAAAGACTTCATTTCCAACTCAGCAGATTCGACTACTTTGACCGTTAGTGTCGGTCCAGATACAATGGCAGACATCACCAATGCAACCATGAATGGATTGGAGATTATGAAGATAAGCAACCAAGCTGGGAGCTTGGATGGAACTTCATCTGTTGAAAGTCTTTTCCCAGATGCGCCTTCAAAGAAGAACAATATAGCAATCATTGTTGGTTGTGTCTTGGGAGCTGTAGTTGGCCTTGCTTTGCTCATCTTGTGTTATTGCTGTTACATAGGACGCAAGTCAAAGACTACTCAACCACCACACCCTTGGCTGCCTTTGCCCTTATATGGAAACTCTCAAACCATTACAAAAGTGTCAACAACTTCTCAAAAGAGTGGAACTGCAAGCTTCATTTCTTTGGCTTCCTCCAGTCTCGGCAGATTCTTCACATTTCAGGAAATTCTTGATGCTACCAACAAATTTGACGAAAATCTGCTCCTTGGAGTTGGTGGTTTTGGTAGAGTTTACAAGGGAACACTTGAAGATGGTATGAAAGTTGCTGTTAAAAGAGGTAACCCCAGATCAGAACAAGGTCTTGCCGAATTTCGAACTGAAATAGAAATGTTATCAAAGCTCCGACATCGTCACCTAGTGTCTCTTATTGGCTACTGTGATGAAAGATCAGAAATGATTCTTGTCTATGAGTACATGGCAAATGGACCTCTCAGGAGTCACTTGTATGGAACAGATCTACCACCGTTGTCGTGGAAGCAACGACTTGATATTTGCATTGGTGCTGCGAGGGGGCTTCATTATCTTCACACTGGTGCAGCTCAAAGCATTATACACCGAGATGTTAAAACCACAAACATTCTCTTGGACGAGAATTTTGTTGCCAAAGTTGCAGACTTCGGTCTCTCAAAAACTGGGCCATCTCTGGATCAGACTCATGTAAGTACTGCTGTCAAGGGTAGTTTTGGTTACCTCGATCCTGAATACTTCAGGCGACAACAGCTCACTGAGAAGTCAGATGTATATTCATTCGGGGTTGTGCTAATGGAAGTTCTCTGCACGAGGCCAGCGCTAAACCCTGTTCTGCCCCGAGAACAAGTCAATATAGCAGAATGGGCAATGACCTGGCAGAAGAAGGGCATGCTAGATCATATTATGGACCCAAATCTGGTAGGTAAAGTTAATCCAGCATCACTTAAGAAATTTGGTGAAACAGCTGAGAAGTGTCTGGCCGAGTATGGGGTTGACAGGCCATCTATGGGAGACGTCCTGTGGAACCTGGAATATGCTCTTCAGCTCGAGGAAACTTCATCTGCTCTAATGGAACCTGAAGACAACAGCACAAATCACATCCCTACCATCCAACTGACCCCACTTGAGCCATTTGATAATAGTGTAAGCATGATTGATGGAGGGAACTCTGGCACCGACGATGATGCAGAAGATGCTGCAACAAGTGCAGTATTTTCACAGCTCGTAAATCCTCGTGGGAGATGA 2529 42.98 MVKMKFVSMSMVMSVVLFMCIGSYASFTPIDNYLISCGSTQNITFQGRTFVPDSGHSLLSNDGESSVVVSSKGTTAPSPIYQSARVFTSISSYKFEIKKEGRHWVRLYFYPIPKSERNLASASITVVTEKFVLLNNFTFKNYNGSFMFKEYAINVTSDSLTLTFIPSNGSVSFVNAIEVVSVPDELIPDQALALNPSAPFSGISELAFETVYRLNMGGPLLTSQNDTLGRTWENDMKYLHVNSSAVNVSANPRSIKYHAGVTPETAPNWVYATADAMGDPNVPNVNFNLTWVFSVEPNFQYFVRVHFCDIMSKALNNLVFNLYINSDNALGSFDLSSLTGDLGVPYYKDFISNSADSTTLTVSVGPDTMADITNATMNGLEIMKISNQAGSLDGTSSVESLFPDAPSKKNNIAIIVGCVLGAVVGLALLILCYCCYIGRKSKTTQPPHPWLPLPLYGNSQTITKVSTTSQKSGTASFISLASSSLGRFFTFQEILDATNKFDENLLLGVGGFGRVYKGTLEDGMKVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLDICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDHIMDPNLVGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLEETSSALMEPEDNSTNHIPTIQLTPLEPFDNSVSMIDGGNSGTDDDAEDAATSAVFSQLVNPRGR 842
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 34151206 34153734 + CrPI670011_11g022370.1 Cre11g2237 513982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g2237 842 SUPERFAMILY Protein kinase-like (PK-like) 478 772 IPR011009 -
Cre11g2237 842 Gene3D Phosphorylase Kinase; domain 1 459 576 - -
Cre11g2237 842 SMART serkin_6 501 774 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g2237 842 CDD STKc_IRAK 507 772 - -
Cre11g2237 842 Gene3D Transferase(Phosphotransferase) domain 1 577 794 - -
Cre11g2237 842 Pfam Protein tyrosine and serine/threonine kinase 507 698 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g2237 842 FunFam Receptor-like protein kinase FERONIA 207 387 - -
Cre11g2237 842 PANTHER OS03G0124300 PROTEIN-RELATED 8 440 IPR045272 GO:0004714(InterPro)|GO:0006468(InterPro)
Cre11g2237 842 ProSiteProfiles Protein kinase domain profile. 501 774 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g2237 842 MobiDBLite consensus disorder prediction 806 827 - -
Cre11g2237 842 FunFam Receptor-like protein kinase FERONIA 577 793 - -
Cre11g2237 842 FunFam receptor-like protein kinase FERONIA 463 576 - -
Cre11g2237 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g2237 842 Pfam Malectin-like domain 35 385 IPR024788 -
Cre11g2237 842 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524(InterPro)
Cre11g2237 842 FunFam Putative receptor-like protein kinase 32 183 - -
Cre11g2237 842 Gene3D - 32 182 - -
Cre11g2237 842 Gene3D - 206 387 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1991 Cre-Chr2:33349055 Cre11g2237 Cre-Chr11:34151206 2.80E-178 dispersed
Cre04g1339 Cre-Chr4:32224581 Cre11g2237 Cre-Chr11:34151206 2.30E-142 dispersed
Cre04g1678 Cre-Chr4:35088091 Cre11g2237 Cre-Chr11:34151206 2.40E-64 dispersed
Cre05g1020 Cre-Chr5:9444785 Cre11g2237 Cre-Chr11:34151206 5.10E-209 dispersed
Cre09g0221 Cre-Chr9:2312487 Cre11g2237 Cre-Chr11:34151206 2.40E-225 dispersed
Cre11g0973 Cre-Chr11:6985792 Cre11g2237 Cre-Chr11:34151206 2.90E-122 dispersed
Cre11g1753 Cre-Chr11:29171287 Cre11g2237 Cre-Chr11:34151206 1.30E-161 dispersed
Cre11g2237 Cre-Chr11:34151206 Cre09g1021 Cre-Chr9:10465024 2.90E-66 dispersed
Cre02g1679 Cre-Chr2:29849570 Cre11g2237 Cre-Chr11:34151206 4.00E-182 transposed
Cre02g2358 Cre-Chr2:37016091 Cre11g2237 Cre-Chr11:34151206 2.80E-239 transposed
Cre04g2124 Cre-Chr4:38490545 Cre11g2237 Cre-Chr11:34151206 5.80E-192 transposed
Cre11g2237 Cre-Chr11:34151206 Cre08g0879 Cre-Chr8:21917162 2.70E-64 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64581 PF12819 Malectin_like 1.80E-39 CL0202 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g2237 - - - 0.0