Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g2245 ATGGAGGTTTGTTTCTCAACGGAATTGCCCTCTTTCGATATGCGGATTGCTGTTGCAGAAGAGGCTGGTGTTTTTTGGGTTGAGATTGTGGTGAATTTGGGGTGGAATTCTGTGAAATTTTGGAATTTGAAGTACTGGGGTTTTGGCAAAATGATGTTATCCGCGTCGCCTTCGGCAATAGCTCGAAGCTCACTGGAGGAAATGCTTGATTCTCTTCGACGAAGGGATGAGATTGAGAAGCCTAAAGACTTGCCGCCTGCATTGCCGTCTCGGCCCACTTCGAAGGCTCGCATTCCGCCGGTGAAGCGGGCTTTACCCGTCAATTTCAGGGTTAATGATGACGGTTCCTCAGAGTGCTCTATTAATGTCTTTAATGGAAGGGAAGATGCAATGAGGAAGGAGAATGGTTTGGGTAACTTTGCATTCAGGAGAATAAAGGGAGATCAAGACGATGAATCGCCTTACATGGTAGCTTCAGAAAATGATAATAGAGATCAAGTGTATGGCTCGAATGGTGCTTCTGCTTTACTTTCAAATATTCAAGGGTCTAACTGGGAGGACAATATCAGTTATTTTCTTCATAAGAAACTCCGGGTTTGGTGTCAACTTCCAACTGGACAATGGGAGTTAGGAACTATACAGTCAAACAGTGGGGTGGAGGCATCTGTCATGCTCTCAAACAAAAAGGTTGTTAAAGTTTCAACAGTAGATCTTTTACCTGCTAATCCAGATATAGTGGAGGGGGTTGATGATCTTGCACAGCTCGGTTATTTGAATGAGCCTTCGGTTATTCACAGTCTCCAGAGAAGATTTTCTCGGGATAAAATTTATAGTAAGGCTGGGTCAGTTTTGATTGCAGTCAATCCCTTGAAAGACACTAAACAGTATGGAAATGGATTAATTACAGCCTATAGACAGAGAGTCATGAATGACCCTCATGTTTATGCTATAGCTGATTCTGCCTATTCTGCGATGATGCAAGATGAAGTTAATCAATCTATTATCATCAGTGGAGAAAGTGGAGCTGGAAAAACTGAGACAGCAAAAGCTGCAGTTCAATACCTGGCTGCTCTTGGTGGTGGCAGTGGCATAGATGATAGAATCCCACAGGCGAATGTTATACTGGAAGCATTTGGGAATGCTAAAACCTCCAGAAACAACAATGCTAGCAGATTTGGGAAGTTGATTGAAATTCTTTTTAGCAGAACAGGGAAGATATGTGGTGCTGTAATCCAGACATTTCTGTTGGAAAAGTCAAGAGTTGTTCAGCTGGTCAATGGTGAGAGATCATTCCATGTCTTTTATCAACTTTGTGCTGGAGCATCATCTACACTTAAAGAGAAATTGAATATCAGAGTGGCTAGTGAGTACAGTTACCTTAATCACAGTGAATGCCTGGTGATTGGTGGTGTGGATGATGCACGGAAATTTCATATTCTTGTGGAAGCCCTAGATACACTTCAATTCACAAAAGAAGATCAAGAGCATGCATTTGGTTTGCTTGCTGCGGTGTTGTGGATAGGAAACATTACGTTTCAAACAATCGATAGTGAAAATCATGTGGAGGTCATGGCTAATGAAGCGGTTGCAAATGCTGCCAAGCTGATGGGTTGCAGTCCTAATGAGCTTAAGTTAGTTTTGTCGACCCACAAAGTGCAATCAGGCAACGGCAGCATTGCTAAAAAATTGACATTACGCCAGGCAACCGATGCAAGAGATGCTTTGGCAAAATTTATCTATGCAAGCTTGTTTGACTGGCTTGTAGAACAGATCAATAAGTCACTTAAACCAAGAACGGAGCATTCTGGAAGATCCATAAATATTCTTGACTTCTATGGGTTTGAGTCATTTAAGAAGAATGGCTTCGAACAGTTTTGTATCAATTATGCAAATGAGAGACTGCAGCAGCATTTTATGAGGCACCTGTTCAAACTTCAGCAGGAGGACTATGAATTTAATGGGGTCGATGGCACAAAAGTCAACTTTGAAGACAATCAAGAGTGTTTGAATCTTATTGAGAAGAAACCTCTTGGAGTTCTAGCTTTGTTGGACGAAGAGTTAAATTTTCCCAAGGCTACAGATCTTACATTTGCTAATAAACTAAAGCAACACTTTAAGTCTCAACCTCGCTTTAAAGGGGAAAGAGGTAGGGCTTTTGGTATTCGCCATTATGCTGGAGAGGTTGTATATGATACAAATGGGTTTTTGGAGAAGAATAGAGATCTGCTGCATTCCGATTCCATCCAACTCTTTTCATCATGTACTTGCAAGCTACTGCAATTACTTGCCTCAAAACTGATTAACCATTCCCAGAAACCAACAGTTTCAATGTGCTCTACAGAAGTAGTAGAATCCCCCGAGCCAGGTGTTGGTACCAAGTACAAGCTTCTACTATTTGACCTATTTCATAAATTGGAGTACACCAGCCATCATTTCATTTGTTGCATAAGGCCGAACAGAAATCAAGTTGGTGGCTTATTTGAGGAGGACCTTGTCCTACAACAGCTTCGGTACTGTGGAATTTTGGAAGTTGTGAGAATTTCAAGATCTGGATATCCTATCAGAATGATGCATCACGAATTTGCTGGAAGGTATGGATTCCTCCTTAAAGAAACTGGTGCATCTCGAGATCCATTGAGTATATCAATTGCTGTTCTACAACAATTTAATGTCCACCCCGAGATGTACCACGTTGGTTATACCAAACTATTTTTCCGACCTGGGCAGATTAGGGCATTGGATGAAAGGAGGAAGCAAGTTATGCAAGGCATCCTAGGGGTACAAAAGTACTTTCGTGGTTGCCATTCCCGTGGCAACTTCCATGATCTTAAGCAAGGGGCCACTACCTTACAATCATTTATTCGTGGTGAAAATGCCAGAAGGAGATGTACCGTTAAGGTGAAGAGGTTCTCATTCGTTGTGTATGCTTTTAGCGTTCCTAAGAAGGCTTACGAACTCCAGGGAATCATACGTTTACAATCTGTCATACGTGGTTCATTGGCTCGAAAGCATTTTTGGAGCATGCGTGATTCAAAGAGGGATTTTCCTGAAAACAAGAAATCTAAACTGACAACAGGCAGAAGGGTTTCAGAGGAAGAATTTCAAGAACGGGTTCAATCCTTGCCAACAACTCTGACTGAGCTTCAAAAGAGGGTCCTGGAGGCAGAAGCAACCATAGAGAAAAAGGAAGGGGAAAATGCTGCACTGCGGGAGCAAGTAAAACAATTCGAGTCTAGGCGGTTAGAATATGAAGCCAAGATGAAGTCCATGGAGGATATGTGGCAAAAGCAGATGGCATCTTTGCAAATGAGTCTTGCTGCTGCTAAAAAGACTCTTGCTGCTGAAAATGTAGCCTGTCCACCAGGAAGAGTTGATGCTGGTAACTCACCACCTCACTATTATGATTCTGAGGATACGACGTCAATGGGATCCCGAACACCTGGTGGTACCACACCTATAAAGGCTTCTGGAATTTCTGAAGTTGGAGCAGGCCGAGAAATGAATGGTACTTTAGTGGCAGTGAACAATCTTGTAAAGGAATTTGAACAGCGAAGAACTGCATTTGACGATGATGCCAAAGCTTTAATTGAAGCAAAATCAGGTCAGGCACAGACAGGGTCTAATTTAAATCCAGATGAAGAATACCGTAAAATTAAAGTCCGATTTGAAGCATGGAAAAAAGAGTACAAGGCTAGATTAAGGGAAACAAAAGCTAAGTTCAGCTTTGTGAATGAATGGAGAGCTCTTGAAAAGAAGGGGGAGAAAACTGTTGAGTTATCTTCTGACAACATGTGGGTGTTGAAGCTGAACCTGATAAAGCCGAGAAATGTGTCGCCCGTTCGTGGGATGGAAGGAGAGTGTTCAGAAGTTGTCATTAGCTCCTTTTCTGAAGTGCATTGGAAATGTGGGCAGTTTTTTGAGTTCTGCTGGAAGTTTGAATGTATATTAGGAAATACCTCAAGAGCTCATCTTGGCAGATCAGCAGAGAGTCCAGCAGTGTCCTATTGA 4008 42.14 MEVCFSTELPSFDMRIAVAEEAGVFWVEIVVNLGWNSVKFWNLKYWGFGKMMLSASPSAIARSSLEEMLDSLRRRDEIEKPKDLPPALPSRPTSKARIPPVKRALPVNFRVNDDGSSECSINVFNGREDAMRKENGLGNFAFRRIKGDQDDESPYMVASENDNRDQVYGSNGASALLSNIQGSNWEDNISYFLHKKLRVWCQLPTGQWELGTIQSNSGVEASVMLSNKKVVKVSTVDLLPANPDIVEGVDDLAQLGYLNEPSVIHSLQRRFSRDKIYSKAGSVLIAVNPLKDTKQYGNGLITAYRQRVMNDPHVYAIADSAYSAMMQDEVNQSIIISGESGAGKTETAKAAVQYLAALGGGSGIDDRIPQANVILEAFGNAKTSRNNNASRFGKLIEILFSRTGKICGAVIQTFLLEKSRVVQLVNGERSFHVFYQLCAGASSTLKEKLNIRVASEYSYLNHSECLVIGGVDDARKFHILVEALDTLQFTKEDQEHAFGLLAAVLWIGNITFQTIDSENHVEVMANEAVANAAKLMGCSPNELKLVLSTHKVQSGNGSIAKKLTLRQATDARDALAKFIYASLFDWLVEQINKSLKPRTEHSGRSINILDFYGFESFKKNGFEQFCINYANERLQQHFMRHLFKLQQEDYEFNGVDGTKVNFEDNQECLNLIEKKPLGVLALLDEELNFPKATDLTFANKLKQHFKSQPRFKGERGRAFGIRHYAGEVVYDTNGFLEKNRDLLHSDSIQLFSSCTCKLLQLLASKLINHSQKPTVSMCSTEVVESPEPGVGTKYKLLLFDLFHKLEYTSHHFICCIRPNRNQVGGLFEEDLVLQQLRYCGILEVVRISRSGYPIRMMHHEFAGRYGFLLKETGASRDPLSISIAVLQQFNVHPEMYHVGYTKLFFRPGQIRALDERRKQVMQGILGVQKYFRGCHSRGNFHDLKQGATTLQSFIRGENARRRCTVKVKRFSFVVYAFSVPKKAYELQGIIRLQSVIRGSLARKHFWSMRDSKRDFPENKKSKLTTGRRVSEEEFQERVQSLPTTLTELQKRVLEAEATIEKKEGENAALREQVKQFESRRLEYEAKMKSMEDMWQKQMASLQMSLAAAKKTLAAENVACPPGRVDAGNSPPHYYDSEDTTSMGSRTPGGTTPIKASGISEVGAGREMNGTLVAVNNLVKEFEQRRTAFDDDAKALIEAKSGQAQTGSNLNPDEEYRKIKVRFEAWKKEYKARLRETKAKFSFVNEWRALEKKGEKTVELSSDNMWVLKLNLIKPRNVSPVRGMEGECSEVVISSFSEVHWKCGQFFEFCWKFECILGNTSRAHLGRSAESPAVSY 1335
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 34221993 34233204 + CrPI670011_11g022450.1 Cre11g2245 513990
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre11g2245 1335 Gene3D - 617 808 - -
Cre11g2245 1335 FunFam Myosin heavy chain 429 485 - -
Cre11g2245 1335 Coils Coil 1045 1093 - -
Cre11g2245 1335 FunFam Myosin IE heavy chain 486 594 - -
Cre11g2245 1335 Gene3D Kinesin motor domain 246 851 IPR036961 -
Cre11g2245 1335 ProSiteProfiles Myosin motor domain profile. 247 918 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre11g2245 1335 ProSiteProfiles IQ motif profile. 985 1014 - -
Cre11g2245 1335 Gene3D - 852 919 - -
Cre11g2245 1335 SMART iq_5 942 964 IPR000048 GO:0005515(InterPro)
Cre11g2245 1335 SMART iq_5 984 1006 IPR000048 GO:0005515(InterPro)
Cre11g2245 1335 SMART iq_5 919 941 IPR000048 GO:0005515(InterPro)
Cre11g2245 1335 Gene3D - 924 969 - -
Cre11g2245 1335 Pfam IQ calmodulin-binding motif 988 1005 IPR000048 GO:0005515(InterPro)
Cre11g2245 1335 Pfam IQ calmodulin-binding motif 946 963 IPR000048 GO:0005515(InterPro)
Cre11g2245 1335 Gene3D Myosin VI head, motor domain, U50 subdomain 486 594 - -
Cre11g2245 1335 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 194 243 IPR004009 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre11g2245 1335 PRINTS Myosin heavy chain signature 605 633 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre11g2245 1335 PRINTS Myosin heavy chain signature 277 296 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre11g2245 1335 PRINTS Myosin heavy chain signature 658 686 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre11g2245 1335 PRINTS Myosin heavy chain signature 331 356 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre11g2245 1335 PRINTS Myosin heavy chain signature 373 400 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre11g2245 1335 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 227 967 IPR027417 -
Cre11g2245 1335 CDD MYSc_Myo8 261 906 IPR036022 -
Cre11g2245 1335 ProSiteProfiles IQ motif profile. 943 971 - -
Cre11g2245 1335 PANTHER MYOSIN 198 1259 - GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER)
Cre11g2245 1335 SMART MYSc_2a 241 919 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre11g2245 1335 Pfam Myosin head (motor domain) 249 906 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre11g2245 1335 Gene3D - 429 485 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1734 Cre-Chr2:30583782 Cre11g2245 Cre-Chr11:34221993 0.00E+00 dispersed
Cre09g0765 Cre-Chr9:7501834 Cre11g2245 Cre-Chr11:34221993 1.60E-136 dispersed
Cre11g2245 Cre-Chr11:34221993 Cre06g0901 Cre-Chr6:2375693 2.40E-147 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g2245 K10357 - csv:101210624 2112.04