Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre11g2267 | ATGAGCTGTTTTTCTTGCATTCGTGCTCGTTGTAAAGACGCCAGCAAGGTCGAAATTGACAATGGGAGTGGAAGGGGGAAGTCGTATGCAAATGAAACTGGAAAGGGGAAGGAATCGCAAACAAGAAGTGGAAACAACCGGAAATGTGGAGCTGCACGAAGCTTCCCATTTCGTGAATTGGCGACGGCTACGAGAGGTTTCAAGGAAGTGAACTTGATTGGTGAAGGGGGTTTTGGAAGAGTTTACAAAGGCCGATTAGAAACAGGCCAGGTTGTTGCGATCAAACAACTCAATCATGATGGTCTTCAGGGATATCAAGAATTCATTGTCGAAGTTCTTATGTTAAGTTTATTGCATCACTGTAATCTTGTCACGTTGATTGGTTATTGTACTGATGGAGATCAAAGACTGTTGGTCTACGAATATATGTCGATGGGAAGCTTGGAGAACCATCTTTTTGGTTTGTCGCCCGAACGGCCACCATTGAGTTGGAACACTAGAATCAAGATTGCTCTTGGTGCAGCCCAGGGCCTTGAGTATCTTCACTGCACAGCCAATCCGCCAGTCATCTACCGTGACTTGAAATCTGCAAATATTTTACTGGATGATGACTTCAATCCAAAGCTCTCGGATTTTGGACTGGCAAAGTTAGGACCGGTTGGTGACAACACTCATGTTTCCACCAGAGTTATGGGAACGTATGGCTATTGTGCTCCGGAGTATGCCATGAGTGGCAAACTGACCCTTAAATCTGATATTTATTGCTTTGGTGTAGTTCTCCTGGAGCTAATTACAGGTAGGAAAGCTATCGACTCCACCAAGAAACCTGGAGAGCAAAATCTGGTTGCTTGGTCTCGCCCTTTTCTAAAAGACCGGAGGAAGTTCATTCAATTAGTCGACCCACTGCTGGAAGGGCGCTACCCTCTTCGTTGTCTACACCATGCAATCGCAATTGCTGCAATGTGTCTCCAGGAGCAACCAACATTCCGGCCAATTATCAGTGATATCGTTGTGGCCCTTGAGTACTTAGCTTCTCAGAGTTACTTATCAGAACAACCGAGGGACGGCATGCCTAGTCCGTCCAAGCTATCTCCTCAAGGGGACAGGAGTAACCGTCTCTGTAAGGTGCATTTGCTGGCGTTAGCAAAACCCGACCAACTCCAATCTCCTGTTTAA | 1176 | 46.09 | MSCFSCIRARCKDASKVEIDNGSGRGKSYANETGKGKESQTRSGNNRKCGAARSFPFRELATATRGFKEVNLIGEGGFGRVYKGRLETGQVVAIKQLNHDGLQGYQEFIVEVLMLSLLHHCNLVTLIGYCTDGDQRLLVYEYMSMGSLENHLFGLSPERPPLSWNTRIKIALGAAQGLEYLHCTANPPVIYRDLKSANILLDDDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYCFGVVLLELITGRKAIDSTKKPGEQNLVAWSRPFLKDRRKFIQLVDPLLEGRYPLRCLHHAIAIAAMCLQEQPTFRPIISDIVVALEYLASQSYLSEQPRDGMPSPSKLSPQGDRSNRLCKVHLLALAKPDQLQSPV | 391 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 34447006 | 34449630 | - | CrPI670011_11g022670.1 | Cre11g2267 | 514012 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre11g2267 | 391 | Gene3D | Transferase(Phosphotransferase) domain 1 | 143 | 356 | - | - | |
Cre11g2267 | 391 | ProSitePatterns | Protein kinases ATP-binding region signature. | 73 | 95 | IPR017441 | GO:0005524(InterPro) | |
Cre11g2267 | 391 | CDD | STKc_IRAK | 73 | 341 | - | - | |
Cre11g2267 | 391 | MobiDBLite | consensus disorder prediction | 33 | 48 | - | - | |
Cre11g2267 | 391 | Pfam | Protein kinase domain | 68 | 336 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre11g2267 | 391 | PIRSF | ILK | 25 | 355 | - | - | |
Cre11g2267 | 391 | MobiDBLite | consensus disorder prediction | 350 | 369 | - | - | |
Cre11g2267 | 391 | FunFam | Serine/threonine-protein kinase PBS1 | 143 | 356 | - | - | |
Cre11g2267 | 391 | FunFam | probable serine/threonine-protein kinase RLCKVII | 37 | 142 | - | - | |
Cre11g2267 | 391 | Gene3D | Phosphorylase Kinase; domain 1 | 37 | 142 | - | - | |
Cre11g2267 | 391 | PANTHER | OS07G0668900 PROTEIN | 33 | 355 | - | - | |
Cre11g2267 | 391 | ProSiteProfiles | Protein kinase domain profile. | 67 | 343 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre11g2267 | 391 | SMART | serkin_6 | 67 | 343 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre11g2267 | 391 | MobiDBLite | consensus disorder prediction | 22 | 50 | - | - | |
Cre11g2267 | 391 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 189 | 201 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre11g2267 | 391 | SUPERFAMILY | Protein kinase-like (PK-like) | 50 | 341 | IPR011009 | - | |
Cre11g2267 | 391 | MobiDBLite | consensus disorder prediction | 350 | 368 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre08g0879 | Cre-Chr8:21917162 | Cre11g2267 | Cre-Chr11:34447006 | 4.40E-155 | dispersed | |
Cre10g1470 | Cre-Chr10:28563898 | Cre11g2267 | Cre-Chr11:34447006 | 4.20E-75 | dispersed | |
Cre10g2179 | Cre-Chr10:36331013 | Cre11g2267 | Cre-Chr11:34447006 | 2.90E-125 | dispersed | |
Cre11g1014 | Cre-Chr11:7454804 | Cre11g2267 | Cre-Chr11:34447006 | 3.40E-78 | dispersed | |
Cre11g1560 | Cre-Chr11:25254329 | Cre11g2267 | Cre-Chr11:34447006 | 1.30E-82 | dispersed | |
Cre11g2267 | Cre-Chr11:34447006 | Cre02g0678 | Cre-Chr2:3742944 | 6.60E-82 | wgd | |
Cre11g2267 | Cre-Chr11:34447006 | Cre08g0898 | Cre-Chr8:22081648 | 1.60E-32 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64582 | PF00069 | Pkinase | 4.30E-45 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre11g2267 | - | - | - | 0.0 |