Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g2267 ATGAGCTGTTTTTCTTGCATTCGTGCTCGTTGTAAAGACGCCAGCAAGGTCGAAATTGACAATGGGAGTGGAAGGGGGAAGTCGTATGCAAATGAAACTGGAAAGGGGAAGGAATCGCAAACAAGAAGTGGAAACAACCGGAAATGTGGAGCTGCACGAAGCTTCCCATTTCGTGAATTGGCGACGGCTACGAGAGGTTTCAAGGAAGTGAACTTGATTGGTGAAGGGGGTTTTGGAAGAGTTTACAAAGGCCGATTAGAAACAGGCCAGGTTGTTGCGATCAAACAACTCAATCATGATGGTCTTCAGGGATATCAAGAATTCATTGTCGAAGTTCTTATGTTAAGTTTATTGCATCACTGTAATCTTGTCACGTTGATTGGTTATTGTACTGATGGAGATCAAAGACTGTTGGTCTACGAATATATGTCGATGGGAAGCTTGGAGAACCATCTTTTTGGTTTGTCGCCCGAACGGCCACCATTGAGTTGGAACACTAGAATCAAGATTGCTCTTGGTGCAGCCCAGGGCCTTGAGTATCTTCACTGCACAGCCAATCCGCCAGTCATCTACCGTGACTTGAAATCTGCAAATATTTTACTGGATGATGACTTCAATCCAAAGCTCTCGGATTTTGGACTGGCAAAGTTAGGACCGGTTGGTGACAACACTCATGTTTCCACCAGAGTTATGGGAACGTATGGCTATTGTGCTCCGGAGTATGCCATGAGTGGCAAACTGACCCTTAAATCTGATATTTATTGCTTTGGTGTAGTTCTCCTGGAGCTAATTACAGGTAGGAAAGCTATCGACTCCACCAAGAAACCTGGAGAGCAAAATCTGGTTGCTTGGTCTCGCCCTTTTCTAAAAGACCGGAGGAAGTTCATTCAATTAGTCGACCCACTGCTGGAAGGGCGCTACCCTCTTCGTTGTCTACACCATGCAATCGCAATTGCTGCAATGTGTCTCCAGGAGCAACCAACATTCCGGCCAATTATCAGTGATATCGTTGTGGCCCTTGAGTACTTAGCTTCTCAGAGTTACTTATCAGAACAACCGAGGGACGGCATGCCTAGTCCGTCCAAGCTATCTCCTCAAGGGGACAGGAGTAACCGTCTCTGTAAGGTGCATTTGCTGGCGTTAGCAAAACCCGACCAACTCCAATCTCCTGTTTAA 1176 46.09 MSCFSCIRARCKDASKVEIDNGSGRGKSYANETGKGKESQTRSGNNRKCGAARSFPFRELATATRGFKEVNLIGEGGFGRVYKGRLETGQVVAIKQLNHDGLQGYQEFIVEVLMLSLLHHCNLVTLIGYCTDGDQRLLVYEYMSMGSLENHLFGLSPERPPLSWNTRIKIALGAAQGLEYLHCTANPPVIYRDLKSANILLDDDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYCFGVVLLELITGRKAIDSTKKPGEQNLVAWSRPFLKDRRKFIQLVDPLLEGRYPLRCLHHAIAIAAMCLQEQPTFRPIISDIVVALEYLASQSYLSEQPRDGMPSPSKLSPQGDRSNRLCKVHLLALAKPDQLQSPV 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 34447006 34449630 - CrPI670011_11g022670.1 Cre11g2267 514012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g2267 391 Gene3D Transferase(Phosphotransferase) domain 1 143 356 - -
Cre11g2267 391 ProSitePatterns Protein kinases ATP-binding region signature. 73 95 IPR017441 GO:0005524(InterPro)
Cre11g2267 391 CDD STKc_IRAK 73 341 - -
Cre11g2267 391 MobiDBLite consensus disorder prediction 33 48 - -
Cre11g2267 391 Pfam Protein kinase domain 68 336 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g2267 391 PIRSF ILK 25 355 - -
Cre11g2267 391 MobiDBLite consensus disorder prediction 350 369 - -
Cre11g2267 391 FunFam Serine/threonine-protein kinase PBS1 143 356 - -
Cre11g2267 391 FunFam probable serine/threonine-protein kinase RLCKVII 37 142 - -
Cre11g2267 391 Gene3D Phosphorylase Kinase; domain 1 37 142 - -
Cre11g2267 391 PANTHER OS07G0668900 PROTEIN 33 355 - -
Cre11g2267 391 ProSiteProfiles Protein kinase domain profile. 67 343 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g2267 391 SMART serkin_6 67 343 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre11g2267 391 MobiDBLite consensus disorder prediction 22 50 - -
Cre11g2267 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre11g2267 391 SUPERFAMILY Protein kinase-like (PK-like) 50 341 IPR011009 -
Cre11g2267 391 MobiDBLite consensus disorder prediction 350 368 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g0879 Cre-Chr8:21917162 Cre11g2267 Cre-Chr11:34447006 4.40E-155 dispersed
Cre10g1470 Cre-Chr10:28563898 Cre11g2267 Cre-Chr11:34447006 4.20E-75 dispersed
Cre10g2179 Cre-Chr10:36331013 Cre11g2267 Cre-Chr11:34447006 2.90E-125 dispersed
Cre11g1014 Cre-Chr11:7454804 Cre11g2267 Cre-Chr11:34447006 3.40E-78 dispersed
Cre11g1560 Cre-Chr11:25254329 Cre11g2267 Cre-Chr11:34447006 1.30E-82 dispersed
Cre11g2267 Cre-Chr11:34447006 Cre02g0678 Cre-Chr2:3742944 6.60E-82 wgd
Cre11g2267 Cre-Chr11:34447006 Cre08g0898 Cre-Chr8:22081648 1.60E-32 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64582 PF00069 Pkinase 4.30E-45 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g2267 - - - 0.0