Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre11g2291 | ATGGGGCTCAAAGTGCTTTCCGCTCTCGACACTGCCAAAACCCAATTGTACCATTTCAAGGCCATCGTCATCGCCGGGATGGGCCTCTTCACCGACGCCTACGATCTCTTCAGTATCACTCCCATTATGACTCTCCTCGGACGTGTCTATTACCCGGACCAACACTACGAGATTCCGGCCGCCGTCAAATCCGCTATGCTCGCGGTGGCTCTTCTGGGGACGGCGATGGGTCAACTGGTGTTTGGCATACTCGGAGACAGAGTGGGACGGCGGCGCGTGTACGGACTCGCATTGGCGCTGATGGTGGTGAGTTCCATCGACTGTGGATTCTCAATCTGCACCACCAGGAGCTGTGTCCTTGTGAGCCTAGGGTTTTTCAGGTTCCTTCTGGGGCTGGGAATTGGGGGAGATTACCCATTGTCGGCGACCATAATGTCGGAGTTCGCTAACAAGAAGACACGTGGAGCGTTCATAGCGGCGGTGTTCTCGATGCAGGGATTCGGGATCTTGGCCAGCGCCACCGTCACCATGATCGTCTGCTCCATATTCGATCGGGCCTCTAACTACCCAACCAGTGATCGTACTCCGATGGGGGCCGATATTGCTTGGAGGCTGATTCTCATGCTCGGCGCTGTGCCGGCGGCGATGACTTATTACTGGCGAATGATGATGCCGGAAACTGCCAGATACACGGCTCTGGTTGAGAGGAATGTGGAACAAGCGGCAAAGGATATGGAAAAAGTGTTGGATGTGTCGTTGGTTGATATCACGGAAGACAGCCCTTTGCCCCCTTCTCCCCCAAATTTCTCCTTCTTTTCCAACCAATTTCTTCGCCGCCATGGCCGCGATCTCCTTTCCTGTGCCGCCTCCTGGTTCCTCGTCGACATCGTCTTCTACAGCAGCAACCTCTTCCAATCCAAAATCTACACCCAATTCCTTCCTTCCAACCAAAAATCCATCAACGTCTACCGTCAAGCCTTCAACGAAGCCAGACTCCAAGCCATCGTCGCCGTCTGTTCCACCATTCCTGGCTACTGGATCTCCGTCTTTTTCATCGACCGTCTCGGCCGAGTCACCATCCAAATCCTCGGATTTCTCTTCATGGCCCTCGGCTATCTCCTCATCGCCATCCCCTACAACTCTTTCTGGGTCTCCGATAAACACAAATACGGTTTCATGCTATTCTACTGCCTCACATTCTTCTTCTCAAATTTCGGCCCCAACACCACCACTTTCATTCTCCCCGCCGAGCTCTTTCCCGCTAGGTTCCGTTCCACCTGCCATGGAATCTCCGGCGCCGCCGGCAAAATCGGGGCCATCATCGGAGCCGTGGGCTTCCTGTGGGCCTCGCACGACCGGAAGGACGGCGGAATTGGGATGAAGGCATCGTTGATGTTGCTTGGTGGGGTGAGTCTTGCGGGAGTGGCGGTCACGTATTTCTTCACCAGAGAAACCAATGGAAGGTCGTTGGAAGAGAATGAGAAGGAAGATGAATACGCTGGGATTTTGTTTCTCAGGTGCTTTCACTTTCACCCTCACCCTCACCACGCTACTGCTACTCCTACTGCTACTGCCTACTCCCGCCCGTCTGTTGCTCAACACGACGACATGTCGTCACGTTCTACCTCCAACTCCATTCCAACTACTACCACACCAATTCATTATTAG | 1668 | 53.96 | MGLKVLSALDTAKTQLYHFKAIVIAGMGLFTDAYDLFSITPIMTLLGRVYYPDQHYEIPAAVKSAMLAVALLGTAMGQLVFGILGDRVGRRRVYGLALALMVVSSIDCGFSICTTRSCVLVSLGFFRFLLGLGIGGDYPLSATIMSEFANKKTRGAFIAAVFSMQGFGILASATVTMIVCSIFDRASNYPTSDRTPMGADIAWRLILMLGAVPAAMTYYWRMMMPETARYTALVERNVEQAAKDMEKVLDVSLVDITEDSPLPPSPPNFSFFSNQFLRRHGRDLLSCAASWFLVDIVFYSSNLFQSKIYTQFLPSNQKSINVYRQAFNEARLQAIVAVCSTIPGYWISVFFIDRLGRVTIQILGFLFMALGYLLIAIPYNSFWVSDKHKYGFMLFYCLTFFFSNFGPNTTTFILPAELFPARFRSTCHGISGAAGKIGAIIGAVGFLWASHDRKDGGIGMKASLMLLGGVSLAGVAVTYFFTRETNGRSLEENEKEDEYAGILFLRCFHFHPHPHHATATPTATAYSRPSVAQHDDMSSRSTSNSIPTTTTPIHY | 555 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 34569255 | 34572008 | - | CrPI670011_11g022910.1 | Cre11g2291 | 514036 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre11g2291 | 555 | Gene3D | MFS general substrate transporter like domains | 17 | 502 | IPR036259 | - | |
Cre11g2291 | 555 | SUPERFAMILY | MFS general substrate transporter | 9 | 497 | IPR036259 | - | |
Cre11g2291 | 555 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 6 | 493 | - | - | |
Cre11g2291 | 555 | ProSitePatterns | Sugar transport proteins signature 2. | 129 | 154 | IPR005829 | GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro) | |
Cre11g2291 | 555 | Pfam | Sugar (and other) transporter | 23 | 494 | IPR005828 | GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro) | |
Cre11g2291 | 555 | CDD | MFS_PhT | 22 | 485 | - | - | |
Cre11g2291 | 555 | FunFam | Inorganic phosphate transporter 1-6 | 17 | 501 | - | - | |
Cre11g2291 | 555 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 21 | 486 | IPR020846 | GO:0022857(InterPro) | |
Cre11g2291 | 555 | MobiDBLite | consensus disorder prediction | 529 | 555 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre07g0464 | Cre-Chr7:2409442 | Cre11g2291 | Cre-Chr11:34569255 | 3.40E-137 | dispersed | |
Cre08g0505 | Cre-Chr8:17473711 | Cre11g2291 | Cre-Chr11:34569255 | 2.90E-86 | dispersed | |
Cre11g2291 | Cre-Chr11:34569255 | Cre06g1458 | Cre-Chr6:9103398 | 1.40E-138 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre11g2291 | K08176 | - | csv:101218554 | 915.99 |