Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre11g2299 ATGGCGACGATGGCGATGAAGGGCAAAGTTTGTGTTACAGGGGCTGGAGGGTTTATTGGTTCGTGGGTCGTCAAGCTTCTGCTATCCAGGGATTATATTGTTCACGGCACTGTCAGGGAGCCTAGCGATGCTAAGTATGATCACTTGAGAAAACTTGAGAAAGCGACCGAGAATTTGGAACTGTTTAAGGCTGATTTGCTGAACTACGAGTCTCTGCGTTCAGCGATTGCAGGATGTGATGGAGTTTTCCATGTTGCCTGTCCAGTTCCTTCCACAACTTCATCAAACCCCGAGACAGAAGTGATTGAACCTGCTGTAAAGGGCACACATAATGTGCTTGAAGCTTGTGTTGAAGCAAAAATTAAGCGAGTAGTTGTAGTATCCTCAGCCGCTGCAGTGTTTTTCAATCCCAGTTGGCCTCAAGGTCGAGTAATGGATGAAAGTTGTTGGTCCGATATGGAGCACTGCAGAGCTACTAAGAACTGGTATTTTCTGGCAAAAACAAAAGCTGAAAGTGAAGCCTTGGAGTTTGGGAGAAGATGTGGGCTCGACGTTGTGACTATGTGTCCTACTCTCGTTATCGGGCCGGTTTTGCAGGCAACAGTCAACGCCAGCAGCTTGGTCCTTCTCAAAATTCTAAAAGAAGGATGTGAGTCGATGGAAAACAGGCTACGGATGTTAGTAGACGTACGAGATGTAGCAGAGGCGCTAGTTCTTTTATATGAGAAGGGGGAGGCAGAAGGAAGGTATATCTGTACCGCGCATACAATTGAGACAAGGGAGCTGGTGGATGCATTGAAGAGGAAGTACCCTGATTATAGCTATCCAAAGAAGTTGATTGAAGGGAAGGCGGAGTCGGTAAGTCTGAGCTCGGAGAAGCTGCAAAGATTGGGTTGGAAGTATCGGGCGTTAGAGGACACGCTTGTGGATGCTGTCCAGAGTTTCAAAGACGCCGGCATGTTGGAGTGA 969 47.47 MATMAMKGKVCVTGAGGFIGSWVVKLLLSRDYIVHGTVREPSDAKYDHLRKLEKATENLELFKADLLNYESLRSAIAGCDGVFHVACPVPSTTSSNPETEVIEPAVKGTHNVLEACVEAKIKRVVVVSSAAAVFFNPSWPQGRVMDESCWSDMEHCRATKNWYFLAKTKAESEALEFGRRCGLDVVTMCPTLVIGPVLQATVNASSLVLLKILKEGCESMENRLRMLVDVRDVAEALVLLYEKGEAEGRYICTAHTIETRELVDALKRKYPDYSYPKKLIEGKAESVSLSSEKLQRLGWKYRALEDTLVDAVQSFKDAGMLE 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 34606621 34609509 + CrPI670011_11g022990.1 Cre11g2299 514044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre11g2299 322 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 313 IPR050425 GO:0016616(PANTHER)
Cre11g2299 322 Coils Coil 52 72 - -
Cre11g2299 322 FunFam NAD(P)-binding Rossmann-fold superfamily protein 3 322 - -
Cre11g2299 322 Gene3D - 2 322 - -
Cre11g2299 322 Pfam NAD dependent epimerase/dehydratase family 10 246 IPR001509 -
Cre11g2299 322 CDD FR_SDR_e 10 299 - -
Cre11g2299 322 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 316 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre06g0816 Cre-Chr6:1498111 Cre11g2299 Cre-Chr11:34606621 1.10E-48 dispersed
Cre10g1448 Cre-Chr10:28289633 Cre11g2299 Cre-Chr11:34606621 2.10E-73 dispersed
Cre10g1449 Cre-Chr10:28312177 Cre11g2299 Cre-Chr11:34606621 1.20E-68 dispersed
Cre11g2299 Cre-Chr11:34606621 Cre08g0914 Cre-Chr8:22288645 3.10E-08 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre11g2299 - - - 0.0