Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre11g2299 | ATGGCGACGATGGCGATGAAGGGCAAAGTTTGTGTTACAGGGGCTGGAGGGTTTATTGGTTCGTGGGTCGTCAAGCTTCTGCTATCCAGGGATTATATTGTTCACGGCACTGTCAGGGAGCCTAGCGATGCTAAGTATGATCACTTGAGAAAACTTGAGAAAGCGACCGAGAATTTGGAACTGTTTAAGGCTGATTTGCTGAACTACGAGTCTCTGCGTTCAGCGATTGCAGGATGTGATGGAGTTTTCCATGTTGCCTGTCCAGTTCCTTCCACAACTTCATCAAACCCCGAGACAGAAGTGATTGAACCTGCTGTAAAGGGCACACATAATGTGCTTGAAGCTTGTGTTGAAGCAAAAATTAAGCGAGTAGTTGTAGTATCCTCAGCCGCTGCAGTGTTTTTCAATCCCAGTTGGCCTCAAGGTCGAGTAATGGATGAAAGTTGTTGGTCCGATATGGAGCACTGCAGAGCTACTAAGAACTGGTATTTTCTGGCAAAAACAAAAGCTGAAAGTGAAGCCTTGGAGTTTGGGAGAAGATGTGGGCTCGACGTTGTGACTATGTGTCCTACTCTCGTTATCGGGCCGGTTTTGCAGGCAACAGTCAACGCCAGCAGCTTGGTCCTTCTCAAAATTCTAAAAGAAGGATGTGAGTCGATGGAAAACAGGCTACGGATGTTAGTAGACGTACGAGATGTAGCAGAGGCGCTAGTTCTTTTATATGAGAAGGGGGAGGCAGAAGGAAGGTATATCTGTACCGCGCATACAATTGAGACAAGGGAGCTGGTGGATGCATTGAAGAGGAAGTACCCTGATTATAGCTATCCAAAGAAGTTGATTGAAGGGAAGGCGGAGTCGGTAAGTCTGAGCTCGGAGAAGCTGCAAAGATTGGGTTGGAAGTATCGGGCGTTAGAGGACACGCTTGTGGATGCTGTCCAGAGTTTCAAAGACGCCGGCATGTTGGAGTGA | 969 | 47.47 | MATMAMKGKVCVTGAGGFIGSWVVKLLLSRDYIVHGTVREPSDAKYDHLRKLEKATENLELFKADLLNYESLRSAIAGCDGVFHVACPVPSTTSSNPETEVIEPAVKGTHNVLEACVEAKIKRVVVVSSAAAVFFNPSWPQGRVMDESCWSDMEHCRATKNWYFLAKTKAESEALEFGRRCGLDVVTMCPTLVIGPVLQATVNASSLVLLKILKEGCESMENRLRMLVDVRDVAEALVLLYEKGEAEGRYICTAHTIETRELVDALKRKYPDYSYPKKLIEGKAESVSLSSEKLQRLGWKYRALEDTLVDAVQSFKDAGMLE | 322 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 34606621 | 34609509 | + | CrPI670011_11g022990.1 | Cre11g2299 | 514044 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre11g2299 | 322 | PANTHER | NAD DEPENDENT EPIMERASE/DEHYDRATASE | 9 | 313 | IPR050425 | GO:0016616(PANTHER) | |
Cre11g2299 | 322 | Coils | Coil | 52 | 72 | - | - | |
Cre11g2299 | 322 | FunFam | NAD(P)-binding Rossmann-fold superfamily protein | 3 | 322 | - | - | |
Cre11g2299 | 322 | Gene3D | - | 2 | 322 | - | - | |
Cre11g2299 | 322 | Pfam | NAD dependent epimerase/dehydratase family | 10 | 246 | IPR001509 | - | |
Cre11g2299 | 322 | CDD | FR_SDR_e | 10 | 299 | - | - | |
Cre11g2299 | 322 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 3 | 316 | IPR036291 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre06g0816 | Cre-Chr6:1498111 | Cre11g2299 | Cre-Chr11:34606621 | 1.10E-48 | dispersed | |
Cre10g1448 | Cre-Chr10:28289633 | Cre11g2299 | Cre-Chr11:34606621 | 2.10E-73 | dispersed | |
Cre10g1449 | Cre-Chr10:28312177 | Cre11g2299 | Cre-Chr11:34606621 | 1.20E-68 | dispersed | |
Cre11g2299 | Cre-Chr11:34606621 | Cre08g0914 | Cre-Chr8:22288645 | 3.10E-08 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre11g2299 | - | - | - | 0.0 |