Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa01g00063 | ATGATCTACTTCACCATGTCCCTCTTCCTACTTCTCTCAACTTCTCTATGGGCTTTTTTTCTTCTCTATCTTTGCATATTCAAATTCTACTGCTTCTCTAGAAAGCGCTTTTACTATTCTCCATCTTCATATCCTTTCATAGGTTGCTTGATTTCTTTTTACAAAAACCGGCGTAGGCTTCTAACCTGGTACACCGATCTGCTGTCGGACTCACCCACTCAGACCATCGTGATGCATCGGCTCGGTTCGAGGCGGACCATTCTGACGGCTAACCCAGCCAATGTAGAACACATGTTGAAGACTAATTTCCTTAATTATCCTAAAGGGAAGCCGTTTACTGATATACTTGGCGATCTACTTGGGTGTGGCATTTTTAACGTCGATGGCGATTTATGGTCCACACAAAGGAAGCTTGCCAGTCATGCATTTTCCGCTAAGTCGTTGAGGGAATTCGTGGTTAAAACGCTTGAAGACGAAGTTCATTTCCGTTTGATTCCGTTGCTTCATAACGCTGCGAGAACTAACGCTGTTCTTGATTTGCAAGATGTTTTGGGAAGACTCGCTTTTGACACCGTTTGTAAGGTTACGTTGGGAACGGACGAGCAATGTTTAGACATGTCGCGCCCAATCCCAGAAATTGTAAAAGCATTCGACGTGGCAACGGCGATCAGCGCAAGGCGGGCAGTGACGCCACTCTACCTCACGTGGAAGGTCAAGCGCATGCTCAACCTCGGCTCTGAAAAGAAGCTAAAACAAGTGGTTCAAACGGTTCACGAATGGATCTCCAATATCATTCACAACAAAGTCCTCAATAACAACGATAATAAAGATCGTAACCATAACCAAACACAAAACAACAGCGATCTGTTATCTCGTCTCCTATCGGCCGGCCTCAACGAGGAAGTCATAAGAGACATGATCGTAAGCTTCATAATGGCTGGCCGCGACACCACCTCAGCTGCCATGACATGGCTCTTTTGGTTGCTCACAAACCACCGGAACATCGAACAAACCATAATCAACGAAGCCACTTCATTGTCCGATCACGATTATTCGAAAACCACGTCGTTGGGTTACGGTTACGAAGAGTTGAAAGATATGAAGTATTTGAAAGCGTGTTTATGCGAGTCGATGAGGCTATACCCACCAGTAGCATGGGATTCAAAGCATGCAGCAGCTGCGGACATTCTCCCAGACGGAACCCAAGTGAGGAAAGGGGATAGAGTGACGTATTTTCCTTACGGAATGGGGCGGATGGAGGAGCTGTGGGGAAAAGACCGGCTAGAGTTCAAACCGGAGAGGTGGTTCCAAAACGGGGAGTTGAAAACGGTGAGTGCGTTCAAGTTTCCGGTGTTTCAAGCGGGTCCAAGGATGTGTTTGGGGACGGAAATGGCGTTCATTCAGATGAAATACGTGATGGCCACGGTTTTGAAACGGTTTGAATTTAGACGAGTGAGTGAAAATAATGAGCCGGTTTTTGTCCCGTTGCTGACAGCGCATATGGCGGGTGGACTAAAGGTTTATGTCAGGGAAAGGACGGAACAATAG | 1548 | 46.51 | MIYFTMSLFLLLSTSLWAFFLLYLCIFKFYCFSRKRFYYSPSSYPFIGCLISFYKNRRRLLTWYTDLLSDSPTQTIVMHRLGSRRTILTANPANVEHMLKTNFLNYPKGKPFTDILGDLLGCGIFNVDGDLWSTQRKLASHAFSAKSLREFVVKTLEDEVHFRLIPLLHNAARTNAVLDLQDVLGRLAFDTVCKVTLGTDEQCLDMSRPIPEIVKAFDVATAISARRAVTPLYLTWKVKRMLNLGSEKKLKQVVQTVHEWISNIIHNKVLNNNDNKDRNHNQTQNNSDLLSRLLSAGLNEEVIRDMIVSFIMAGRDTTSAAMTWLFWLLTNHRNIEQTIINEATSLSDHDYSKTTSLGYGYEELKDMKYLKACLCESMRLYPPVAWDSKHAAAADILPDGTQVRKGDRVTYFPYGMGRMEELWGKDRLEFKPERWFQNGELKTVSAFKFPVFQAGPRMCLGTEMAFIQMKYVMATVLKRFEFRRVSENNEPVFVPLLTAHMAGGLKVYVRERTEQ* | 516 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 362093 | 364751 | + | CsaV3_1G000630.1 | Csa01g00063 | 514560 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa01g00063 | 515 | Gene3D | Cytochrome P450 | 22 | 515 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g00063 | 515 | PRINTS | E-class P450 group IV signature | 304 | 330 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g00063 | 515 | PRINTS | E-class P450 group IV signature | 367 | 383 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g00063 | 515 | PRINTS | E-class P450 group IV signature | 401 | 415 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g00063 | 515 | PRINTS | E-class P450 group IV signature | 418 | 436 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g00063 | 515 | PRINTS | E-class P450 group IV signature | 459 | 477 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g00063 | 515 | Pfam | Cytochrome P450 | 41 | 491 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g00063 | 515 | SUPERFAMILY | Cytochrome P450 | 30 | 512 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g00063 | 515 | PRINTS | P450 superfamily signature | 313 | 330 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g00063 | 515 | PRINTS | P450 superfamily signature | 372 | 383 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g00063 | 515 | PRINTS | P450 superfamily signature | 450 | 459 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g00063 | 515 | PRINTS | P450 superfamily signature | 459 | 470 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g00063 | 515 | PANTHER | CYTOCHROME P450 94B3 | 21 | 510 | - | - | |
Csa01g00063 | 515 | PANTHER | CYTOCHROME P450 | 21 | 510 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa01g00063 | Csa-Chr1:362093 | Csa07g01975 | Csa-Chr7:19392733 | 2.99E-110 | dispersed | |
Csa01g01460 | Csa-Chr1:10240997 | Csa01g00063 | Csa-Chr1:362093 | 4.18E-138 | transposed | |
Csa03g03407 | Csa-Chr3:30730099 | Csa01g00063 | Csa-Chr1:362093 | 9.49E-138 | transposed | |
Csa03g03688 | Csa-Chr3:32808195 | Csa01g00063 | Csa-Chr1:362093 | 9.66E-145 | transposed | |
Csa07g01066 | Csa-Chr7:10198721 | Csa01g00063 | Csa-Chr1:362093 | 2.27E-153 | transposed | |
Csa01g00063 | Csa-Chr1:362093 | Csa03g02498 | Csa-Chr3:23451939 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa01g00063 | K20665 | - | csv:101202989 | 1014.99 |