Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g00063 ATGATCTACTTCACCATGTCCCTCTTCCTACTTCTCTCAACTTCTCTATGGGCTTTTTTTCTTCTCTATCTTTGCATATTCAAATTCTACTGCTTCTCTAGAAAGCGCTTTTACTATTCTCCATCTTCATATCCTTTCATAGGTTGCTTGATTTCTTTTTACAAAAACCGGCGTAGGCTTCTAACCTGGTACACCGATCTGCTGTCGGACTCACCCACTCAGACCATCGTGATGCATCGGCTCGGTTCGAGGCGGACCATTCTGACGGCTAACCCAGCCAATGTAGAACACATGTTGAAGACTAATTTCCTTAATTATCCTAAAGGGAAGCCGTTTACTGATATACTTGGCGATCTACTTGGGTGTGGCATTTTTAACGTCGATGGCGATTTATGGTCCACACAAAGGAAGCTTGCCAGTCATGCATTTTCCGCTAAGTCGTTGAGGGAATTCGTGGTTAAAACGCTTGAAGACGAAGTTCATTTCCGTTTGATTCCGTTGCTTCATAACGCTGCGAGAACTAACGCTGTTCTTGATTTGCAAGATGTTTTGGGAAGACTCGCTTTTGACACCGTTTGTAAGGTTACGTTGGGAACGGACGAGCAATGTTTAGACATGTCGCGCCCAATCCCAGAAATTGTAAAAGCATTCGACGTGGCAACGGCGATCAGCGCAAGGCGGGCAGTGACGCCACTCTACCTCACGTGGAAGGTCAAGCGCATGCTCAACCTCGGCTCTGAAAAGAAGCTAAAACAAGTGGTTCAAACGGTTCACGAATGGATCTCCAATATCATTCACAACAAAGTCCTCAATAACAACGATAATAAAGATCGTAACCATAACCAAACACAAAACAACAGCGATCTGTTATCTCGTCTCCTATCGGCCGGCCTCAACGAGGAAGTCATAAGAGACATGATCGTAAGCTTCATAATGGCTGGCCGCGACACCACCTCAGCTGCCATGACATGGCTCTTTTGGTTGCTCACAAACCACCGGAACATCGAACAAACCATAATCAACGAAGCCACTTCATTGTCCGATCACGATTATTCGAAAACCACGTCGTTGGGTTACGGTTACGAAGAGTTGAAAGATATGAAGTATTTGAAAGCGTGTTTATGCGAGTCGATGAGGCTATACCCACCAGTAGCATGGGATTCAAAGCATGCAGCAGCTGCGGACATTCTCCCAGACGGAACCCAAGTGAGGAAAGGGGATAGAGTGACGTATTTTCCTTACGGAATGGGGCGGATGGAGGAGCTGTGGGGAAAAGACCGGCTAGAGTTCAAACCGGAGAGGTGGTTCCAAAACGGGGAGTTGAAAACGGTGAGTGCGTTCAAGTTTCCGGTGTTTCAAGCGGGTCCAAGGATGTGTTTGGGGACGGAAATGGCGTTCATTCAGATGAAATACGTGATGGCCACGGTTTTGAAACGGTTTGAATTTAGACGAGTGAGTGAAAATAATGAGCCGGTTTTTGTCCCGTTGCTGACAGCGCATATGGCGGGTGGACTAAAGGTTTATGTCAGGGAAAGGACGGAACAATAG 1548 46.51 MIYFTMSLFLLLSTSLWAFFLLYLCIFKFYCFSRKRFYYSPSSYPFIGCLISFYKNRRRLLTWYTDLLSDSPTQTIVMHRLGSRRTILTANPANVEHMLKTNFLNYPKGKPFTDILGDLLGCGIFNVDGDLWSTQRKLASHAFSAKSLREFVVKTLEDEVHFRLIPLLHNAARTNAVLDLQDVLGRLAFDTVCKVTLGTDEQCLDMSRPIPEIVKAFDVATAISARRAVTPLYLTWKVKRMLNLGSEKKLKQVVQTVHEWISNIIHNKVLNNNDNKDRNHNQTQNNSDLLSRLLSAGLNEEVIRDMIVSFIMAGRDTTSAAMTWLFWLLTNHRNIEQTIINEATSLSDHDYSKTTSLGYGYEELKDMKYLKACLCESMRLYPPVAWDSKHAAAADILPDGTQVRKGDRVTYFPYGMGRMEELWGKDRLEFKPERWFQNGELKTVSAFKFPVFQAGPRMCLGTEMAFIQMKYVMATVLKRFEFRRVSENNEPVFVPLLTAHMAGGLKVYVRERTEQ* 516
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 362093 364751 + CsaV3_1G000630.1 Csa01g00063 514560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g00063 515 Gene3D Cytochrome P450 22 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g00063 515 PRINTS E-class P450 group IV signature 304 330 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g00063 515 PRINTS E-class P450 group IV signature 367 383 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g00063 515 PRINTS E-class P450 group IV signature 401 415 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g00063 515 PRINTS E-class P450 group IV signature 418 436 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g00063 515 PRINTS E-class P450 group IV signature 459 477 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g00063 515 Pfam Cytochrome P450 41 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g00063 515 SUPERFAMILY Cytochrome P450 30 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g00063 515 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g00063 515 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g00063 515 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g00063 515 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g00063 515 PANTHER CYTOCHROME P450 94B3 21 510 - -
Csa01g00063 515 PANTHER CYTOCHROME P450 21 510 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g00063 Csa-Chr1:362093 Csa07g01975 Csa-Chr7:19392733 2.99E-110 dispersed
Csa01g01460 Csa-Chr1:10240997 Csa01g00063 Csa-Chr1:362093 4.18E-138 transposed
Csa03g03407 Csa-Chr3:30730099 Csa01g00063 Csa-Chr1:362093 9.49E-138 transposed
Csa03g03688 Csa-Chr3:32808195 Csa01g00063 Csa-Chr1:362093 9.66E-145 transposed
Csa07g01066 Csa-Chr7:10198721 Csa01g00063 Csa-Chr1:362093 2.27E-153 transposed
Csa01g00063 Csa-Chr1:362093 Csa03g02498 Csa-Chr3:23451939 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g00063 K20665 - csv:101202989 1014.99