Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa01g00112 | ATGAACACTTTTCTTCTTCATCTTCTTCCTCCTTCTCTTCAACTCTCACTATATTCAATTTCCTTCACTGCTTTCATCCTCCTCCTCATCTTCCTCCTCCAGAAACGCCTTCTCTCCTCTTCACAATCTTCACCTCCATCTCCACCAGCAAAGATTCCAATCTTCGGCCATCTTCTCAGTCTCGGCTCCCTTCCCCATCTCACTCTCCAAAACTACGCTCGTCTCCATGGTCCTTTATTTCTCCTCCGCCTCGGCTCTGTTCCCACCCTCGTCGTTTCTTCCTCCGAACTCGCTCGCGATATCATGAAAACCCACGATCTCATCTTTGCAAACAGACCCAAATCAAGCATTAGCGACAAACTTCTCTACGGTTCCAGAGACGTCGCCGCTTCCCCTTACGGGGAGTACTGGCGACAGATGAAAAGCGTTTGCGTTCTTCATATGTTGAGCAACAAAAGGGTTCAATCCTTTCGTTGTGTAAGAGAAGAAGAGGTTAAATTGATGATTGAGAAGATTGAGCAGAACCCAGTTGGGGTGAATTTGACTGAGATTTTGTCTGGGTTGACGAACGATGTGGTTTGCAGAGTGGGTTTAGGGAGGAAATACAGAGTGGGAGAAGATGGAGTGAAGTTCATGAGTTTGTTAAAGAAATTTGGGGAATTATTGGGGAGTTTTAGTGTACGAGATTTCATTCCTTGGTTGGGTTGGATCGATTGGATTTCTGGGTTGGATGGTAAAGCAAACAGAATAGCGAAAGAGTTGGATGAGTTCTTTGACAGAGTGATTGAAGATCATATGAATCCAGAAAACAAAGAGATGAGGAATTTTGATGAGCAGAAGGATTTGGTTGATGTTTTGCTTTGGATACAGAGAGAAAACTCCATTGGTTTCCCCCTTGAGATGGAGAGCATCAAAGCTCTAATCTTGGACATGTTTGCAGCAGGAACAGACACAACTTACACAGTATTGGAATGGGCAATGTCAGAACTATTGAAACACCCAGAAGTCATGAAGAAACTGAAGAATGAAATCAGAGAAATAAAAGGTGAACACAAAGGAAGCTATGTAAATGAGGATGATCTAAACAAGATGGTATATCTTAAGGCAGTATTCAAAGAAACATTACGACTACACACACCCATCCCTCTTCTTGTCCCAAGAGAATCAATCAAACCAGTAAAATTAGGAGGGTACGATATCAAACCTGGAACTCGAGTTATGATCAATGCATGGACAATCGGGAGAGACCCAAAAGTATGGGAAGAAGCAGAGAAATTTCAACCAGAAAGATTCATGAACAGTTCGATAGATTTCAAAGGTCAAGATTTTGAGTTGATCCCATTTGGTGCAGGAAGAAGAGGATGTCCTGGAATTATGTTTGCAGCTATGGTTAGTGAGATAACTTTAGCAAATTTGGTGCATAAGTTTGAATGGATTTTGCCTAATGGGGAGGATTTGGACATGACAGGAGCCTTTGGGTTATCCATTCATAGAAAGTTTCCACTTGTGGCTACAGCAATTCCTTGTTAG | 1530 | 42.42 | MNTFLLHLLPPSLQLSLYSISFTAFILLLIFLLQKRLLSSSQSSPPSPPAKIPIFGHLLSLGSLPHLTLQNYARLHGPLFLLRLGSVPTLVVSSSELARDIMKTHDLIFANRPKSSISDKLLYGSRDVAASPYGEYWRQMKSVCVLHMLSNKRVQSFRCVREEEVKLMIEKIEQNPVGVNLTEILSGLTNDVVCRVGLGRKYRVGEDGVKFMSLLKKFGELLGSFSVRDFIPWLGWIDWISGLDGKANRIAKELDEFFDRVIEDHMNPENKEMRNFDEQKDLVDVLLWIQRENSIGFPLEMESIKALILDMFAAGTDTTYTVLEWAMSELLKHPEVMKKLKNEIREIKGEHKGSYVNEDDLNKMVYLKAVFKETLRLHTPIPLLVPRESIKPVKLGGYDIKPGTRVMINAWTIGRDPKVWEEAEKFQPERFMNSSIDFKGQDFELIPFGAGRRGCPGIMFAAMVSEITLANLVHKFEWILPNGEDLDMTGAFGLSIHRKFPLVATAIPC* | 510 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 637804 | 639567 | + | CsaV3_1G001120.1 | Csa01g00112 | 514609 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa01g00112 | 509 | PRINTS | P450 superfamily signature | 314 | 331 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g00112 | 509 | PRINTS | P450 superfamily signature | 369 | 380 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g00112 | 509 | PRINTS | P450 superfamily signature | 446 | 455 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g00112 | 509 | Gene3D | Cytochrome P450 | 32 | 503 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g00112 | 509 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 448 | 457 | IPR017972 | GO:0005506|GO:0016705 | |
Csa01g00112 | 509 | Pfam | Cytochrome P450 | 46 | 488 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g00112 | 509 | SUPERFAMILY | Cytochrome P450 | 45 | 508 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g00112 | 509 | PANTHER | CYTOCHROME P450 71B11-RELATED | 22 | 506 | - | - | |
Csa01g00112 | 509 | PRINTS | E-class P450 group I signature | 73 | 92 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g00112 | 509 | PRINTS | E-class P450 group I signature | 97 | 118 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g00112 | 509 | PRINTS | E-class P450 group I signature | 188 | 206 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g00112 | 509 | PRINTS | E-class P450 group I signature | 303 | 320 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g00112 | 509 | PRINTS | E-class P450 group I signature | 323 | 349 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g00112 | 509 | PRINTS | E-class P450 group I signature | 368 | 386 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g00112 | 509 | PRINTS | E-class P450 group I signature | 409 | 433 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g00112 | 509 | PRINTS | E-class P450 group I signature | 445 | 455 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g00112 | 509 | PRINTS | E-class P450 group I signature | 455 | 478 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa01g00112 | 509 | PANTHER | CYTOCHROME P450 71A21-RELATED | 22 | 506 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa01g00112 | Csa-Chr1:637804 | Csa01g00905 | Csa-Chr1:5635608 | 1.15E-154 | dispersed | |
Csa01g00909 | Csa-Chr1:5662884 | Csa01g00112 | Csa-Chr1:637804 | 1.87E-94 | dispersed | |
Csa01g01762 | Csa-Chr1:14380936 | Csa01g00112 | Csa-Chr1:637804 | 9.02E-73 | transposed | |
Csa06g01117 | Csa-Chr6:9273652 | Csa01g00112 | Csa-Chr1:637804 | 1.76E-75 | transposed | |
Csa01g00112 | Csa-Chr1:637804 | Csa01g00894 | Csa-Chr1:5553408 | 1.24E-150 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa01g00112 | - | - | csv:101203222 | 976.852 |