Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g00114 ATGGAACCACGACGTCGACGCCGTCCTCCCTTACTTCTACTTCTACTTCAGCTTTGTATCTTCTTTCTCTTCTTCTTTTCTTCTTATGCAGTCGATTTCTTCTTCAATTCCTTCTCAAACGAATCGAATGGCACTGATTTCATTCTCATTAGCGACGCCAGGTTCGATTCCCCTGTAATCCGCCTCAACAACGACTCAAACCAGAATTCAATCGGTCGTGTTTTCTATCACACGAAGCTAACTATGAAACCCACTTCGAATTTCTCAAAGATTTCTTCCTTTTCAACTTCTTTTGTGTTCTCGATCTTGCTGGAAGACGCTACTAGTCCAGGCTTCGGTTTGGCCTTCGTTCTTTCCAATTCTACTTCCCCTCCCGGTGTCATCGCCGGCCAATACTTTGGTCTCTTTACTAATTCAACAACCCACGTCGTTGCTCCACTTCTCGCCGTCGAATTCGACACTGGCCGAAACACGGAGTTCAACGACCCAGATGATAGTCACATCGGAATCGATTTGAACAGTGTGTTGTCGAGTAAAATACACGGCGCTGGGTATTTTGGTTCCAATGGGCAATTTATTCCGATTCAGATGAGAAATGGGCAAAACCTTCGCGCTTGGATCGAATTCGATGGAGCAAATTTCGAAATTAATGTCACAATCGCCCCAATTGGAATTCCTCGTCCTTCGATACCCACTTTGAGTTTTAGAGATCCTTTAATTGCAAATTATGTATCGACTGAAATGTTTGTGGGATTTTCAGCATCGAAGACAAAATGGGTTGAGGCGCAAAGGATTTTAGCTTGGAGTTTTAGTGACACTGGGGTTGCTAGAGACATTAACACCACAAATTTCCCTGTGTTTATGAGAGAATCACCACCATCTCCTTTGTCGCCAGGATCGGTTGCCGGTATTGTAATTGGCTGTGTTCTGTTTGTGATCATAGTTTCTGGGTTTGGATTTTTTTGGTACTGGCGAAAGAACAGAGCAAAAGAAGAAGACGAAGAAATTGAGGATTGGGAACTTGAATATTGGCCTCATAGATTCTCCAACGAGGAGCTTTCACAAGCTACTGATAAATTTTCCGAAGAAAATCTGTTGGGATCCGGCGGATTTGGAAGGGTATTCAAAGGAACTTTACCAAACCACACGGAAATCGCCGTTAAATGTGTAAATCACGATTCAAAACAGGGGTTAAAGGAATTCATGGCAGAAATCTCAAGTATGGGTAGGCTTCAACATAAGAATCTAGTTCAAATGCGAGGATGGTGTCGAAAAAAAAATGAATTAATGTTGGTTTATGATTATATGCCGAATGGAAGTCTTAATCGGTGGATATTTGACAAGCCCACAACGTTACTCAGCTGGAAGCAGCGACGCCGTGTACTCGGCGACGTTGCGGAAGGTTTGAACTATCTCCATCATGGTTGGGATCAGGTGGTGATTCACAGAGACATAAAATCGAGCAACGTGTTGTTAGATTCAGAAATGAGAGGCAGAGTCGGCGATTTTGGGCTGGCGAAGTTATACCAACACGGCGAAACTCCGAACACCACTCGAATTGTTGGGACTTTGGGGTATTTGGCGCCAGAGATTGCGACGGTGGCTACTCCAACAGCGGCTAGCGATGTTTATAGTTTTGGGGTTGTGGTTCTTGAAGTTGTGTGTGGGCGACGGCCGATTGAGTTGGCAGCGGAGGAAGAAGAAATGGTGCTTATTGATTGGGTGAGAGATCTTTACTCTGCCGGCCGGTTGATTGCGGCGGCAGACTCGAGAATCAGAGAAGAGTATGAGACTGAAGAGATTGAATTGATGTTAAAGCTTGGTTTAGCTTGTTGTCATCCGAACCCTGAACGCCGGCCTACAATGAGAGAGGTGGTGGCAGTTTTGATCGGAGAACAGCCATCAGCGGAGTCGGTTGAGCTTTTATCAGGATTGGCCGGTGGCATGGTTGACGACACTCGAAATGTTGATATTTGA 1977 44.92 MEPRRRRRPPLLLLLLQLCIFFLFFFSSYAVDFFFNSFSNESNGTDFILISDARFDSPVIRLNNDSNQNSIGRVFYHTKLTMKPTSNFSKISSFSTSFVFSILLEDATSPGFGLAFVLSNSTSPPGVIAGQYFGLFTNSTTHVVAPLLAVEFDTGRNTEFNDPDDSHIGIDLNSVLSSKIHGAGYFGSNGQFIPIQMRNGQNLRAWIEFDGANFEINVTIAPIGIPRPSIPTLSFRDPLIANYVSTEMFVGFSASKTKWVEAQRILAWSFSDTGVARDINTTNFPVFMRESPPSPLSPGSVAGIVIGCVLFVIIVSGFGFFWYWRKNRAKEEDEEIEDWELEYWPHRFSNEELSQATDKFSEENLLGSGGFGRVFKGTLPNHTEIAVKCVNHDSKQGLKEFMAEISSMGRLQHKNLVQMRGWCRKKNELMLVYDYMPNGSLNRWIFDKPTTLLSWKQRRRVLGDVAEGLNYLHHGWDQVVIHRDIKSSNVLLDSEMRGRVGDFGLAKLYQHGETPNTTRIVGTLGYLAPEIATVATPTAASDVYSFGVVVLEVVCGRRPIELAAEEEEMVLIDWVRDLYSAGRLIAAADSRIREEYETEEIELMLKLGLACCHPNPERRPTMREVVAVLIGEQPSAESVELLSGLAGGMVDDTRNVDI* 659
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 640563 642539 + CsaV3_1G001140.1 Csa01g00114 514611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g00114 658 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.1 15 646 - -
Csa01g00114 658 CDD lectin_legume_LecRK_Arcelin_ConA 31 274 IPR001220 GO:0030246
Csa01g00114 658 Gene3D Transferase(Phosphotransferase) domain 1 436 641 - -
Csa01g00114 658 CDD STKc_IRAK 366 629 - -
Csa01g00114 658 SUPERFAMILY Protein kinase-like (PK-like) 338 629 IPR011009 -
Csa01g00114 658 Gene3D - 29 286 - -
Csa01g00114 658 PANTHER - 15 646 - -
Csa01g00114 658 ProSitePatterns Legume lectins beta-chain signature. 148 154 IPR019825 -
Csa01g00114 658 Pfam Legume lectin domain 31 283 IPR001220 GO:0030246
Csa01g00114 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Csa01g00114 658 ProSiteProfiles Protein kinase domain profile. 360 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa01g00114 658 SMART serkin_6 360 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa01g00114 658 Gene3D Phosphorylase Kinase; domain 1 323 435 - -
Csa01g00114 658 Pfam Protein kinase domain 361 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa01g00114 658 ProSitePatterns Protein kinases ATP-binding region signature. 366 388 IPR017441 GO:0005524
Csa01g00114 658 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 289 IPR013320 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g00114 Csa-Chr1:640563 Csa03g03164 Csa-Chr3:29333338 1.77E-175 dispersed
Csa01g03369 Csa-Chr1:30320644 Csa01g00114 Csa-Chr1:640563 1.10E-07 dispersed
Csa01g00114 Csa-Chr1:640563 Csa03g03162 Csa-Chr3:29326367 6.88E-166 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77731 PF00069 Pkinase 4.00E-52 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g00114 - - csv:101203461 1244.57