Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa01g00179 | ATGGAAGTTCGAGGACATCACCATTTTCCGCCATTACCAATCTCCTACAACTTCTCCCATCCACAACCCCACCTCCATTTCCCACCCTTTTTCATCCCCCCCCATCTCCATCTTCCCCAATCCGTCATTGTCTTACTTCTCATTCCTTCTGATCATCAAACACTCCACAAACCTTTTCTCCACTGTTCCGGCACCGAGGAAGCAGGTTTTCCACCACCTCCTTCCTCTTCCGCCATGGCTTCCTTTCCTCCTCCCGCTTCCCTTTTCGTAATTATCCTCTTCGCCGTTCCCTTCTTAGTTGAATCCCAGCTTTCTCTTGACTATTACCAGAAAACTTGCCCCGATTTTGCTAAGATCGTCCATGAAACCGTCTCTAAGAAGCTTGCTACTAGCCCAACCGCCGCCGCCGCCACCATGCGTCTCTTGAGCAACGATTGCTTAGTGGGAGGCTGTGATGGCTCTCTTCTCATTGCCTCAAACGCCTTCAACCACGCCGAACGCGATGCGGAAATCAACCTCTCTCTTCCAGGAGACGCATTCGATGTCGTCGCTCGAACGAAGGTCACTTTAGAGCTTTCCTGCCCAGGGATCGTCTCTTGCTCCGACGTATTAGCACAAGCGACTCGCGATCTCATCGCGATTACAGGCGGACCGTCGTACAATGTTCCATTAGGGCGAGAAGATAGTTTGGTATCAAAATCATCCGAAGTAGAAGGAAACATTCCGAAGATGAATCAAACAATTGACGAGTTGATCAAACTATACACAGCGAAAGGATTCACAATTCAAGAAATGGTAGCGTTATACGGTGGAAGAACAATCGGATTCTCAAATTGCAAGGAGTTCGGAGACCGAATCTTCAAATTCAGTAAATCAACACCAACAGATCCAGAGATCCATCCGAAGTTCGCAGAGGCTTTGAAGAAGAGCTGTGAAGGATATGAGAAGAATCCAGGAATGTCAGCGTACAGCGACGTCGTAACGCCGGGGAAATTCGACAATGTGTACTTCCAGAATCTGTTGAAAGGACTGGGATTATCGGCGTCGGAACATGCGATGGTGAAGGACGCAAGGACGAGGAAATTTGTGGAGATGTACGCCGGAAACCAAGCGTTGTTCTTCAAGGATTTCAGTAGCGCCATGGAGAAGTTGAGTGTTCGTGAAGTGAAAACTGGTGGGAAAGGAGAAGTGAGGAGGAAATGCGATGTGTTCAATTCAATTCAAACTTGA | 1230 | 48.21 | MEVRGHHHFPPLPISYNFSHPQPHLHFPPFFIPPHLHLPQSVIVLLLIPSDHQTLHKPFLHCSGTEEAGFPPPPSSSAMASFPPPASLFVIILFAVPFLVESQLSLDYYQKTCPDFAKIVHETVSKKLATSPTAAAATMRLLSNDCLVGGCDGSLLIASNAFNHAERDAEINLSLPGDAFDVVARTKVTLELSCPGIVSCSDVLAQATRDLIAITGGPSYNVPLGREDSLVSKSSEVEGNIPKMNQTIDELIKLYTAKGFTIQEMVALYGGRTIGFSNCKEFGDRIFKFSKSTPTDPEIHPKFAEALKKSCEGYEKNPGMSAYSDVVTPGKFDNVYFQNLLKGLGLSASEHAMVKDARTRKFVEMYAGNQALFFKDFSSAMEKLSVREVKTGGKGEVRRKCDVFNSIQT* | 410 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 1163120 | 1164835 | + | CsaV3_1G001790.1 | Csa01g00179 | 514676 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa01g00179 | 409 | PANTHER | - | 89 | 409 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g00179 | 409 | Gene3D | - | 107 | 405 | - | - | |
Csa01g00179 | 409 | Gene3D | Peroxidase, domain 2 | 242 | 384 | - | - | |
Csa01g00179 | 409 | PRINTS | Haem peroxidase superfamily signature | 135 | 149 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g00179 | 409 | PRINTS | Haem peroxidase superfamily signature | 198 | 215 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g00179 | 409 | PRINTS | Haem peroxidase superfamily signature | 216 | 228 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g00179 | 409 | PRINTS | Haem peroxidase superfamily signature | 264 | 279 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g00179 | 409 | PRINTS | Haem peroxidase superfamily signature | 325 | 340 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g00179 | 409 | PANTHER | PEROXIDASE 41 | 89 | 409 | - | - | |
Csa01g00179 | 409 | Pfam | Peroxidase | 121 | 368 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g00179 | 409 | PRINTS | Plant peroxidase signature | 113 | 132 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g00179 | 409 | PRINTS | Plant peroxidase signature | 137 | 157 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g00179 | 409 | PRINTS | Plant peroxidase signature | 178 | 191 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g00179 | 409 | PRINTS | Plant peroxidase signature | 197 | 207 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g00179 | 409 | PRINTS | Plant peroxidase signature | 216 | 231 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g00179 | 409 | PRINTS | Plant peroxidase signature | 263 | 275 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g00179 | 409 | PRINTS | Plant peroxidase signature | 323 | 338 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g00179 | 409 | PRINTS | Plant peroxidase signature | 339 | 356 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g00179 | 409 | PRINTS | Plant peroxidase signature | 379 | 392 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g00179 | 409 | CDD | secretory_peroxidase | 103 | 404 | IPR033905 | GO:0004601|GO:0042744 | |
Csa01g00179 | 409 | ProSiteProfiles | Plant heme peroxidase family profile. | 103 | 405 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa01g00179 | 409 | SUPERFAMILY | Heme-dependent peroxidases | 103 | 405 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa01g00179 | Csa-Chr1:1163120 | Csa05g02926 | Csa-Chr5:29698277 | 9.34E-121 | dispersed | |
Csa01g00179 | Csa-Chr1:1163120 | Csa01g00826 | Csa-Chr1:5207608 | 1.72E-151 | wgd | |
Csa01g00179 | Csa-Chr1:1163120 | Csa03g03898 | Csa-Chr3:34204986 | 1.08E-130 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa01g00179 | K00430 | - | csv:101213178 | 780.015 |