Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g00186 ATGGCGACGGTTCCTGATCTCTTCCGCCGCAACGGACTTGTTGGGTTTTCCGACGAGTCGAAACAGAGGAGTTCCGGTTCCACTCAGCTTCATGTTCTTGCTGTTGATGATAGTTTTGTTGATCGGAAGGTTATTGAGCGGTTGTTGAAGAGTTCGTCATGTGAAGTGACTGTTGTTGAGAGTGGGAGAAGTGCTCTTCAGTATTTGGGTTTGGATGGGGAAACTAACTCTGTTCAGTTTAGTAGTGCTTTGAAGGTGAATCTCATTATTACAGATTACTCCATGCCTGAAATGACAGGATATGAACTGCTCAAGAAGATCAAGGAATCATCAGCTTTCAGGGAGATTCCTGTTGTGATAATGTCATCAGAGAATATTATGGCTCGTATCGACAGTTGTTTAAAGGAAGGGGCTGAAGAATTCATAGTAAAGCCAGTGAAACTGTCTGATGTGAAACGATTGAAAGATTTCATTATGGAAGGAGAAAATGGAGGGAAGAAAATTGATCTTAAGAGGAAACTCCATCTCAATCATGATCACAACCCATTGTCTCCAGCCTCTCCAACGCCGTCGATGACAGCGTTCGACCAATGCCAAGGATTCAAGCAACGATCACCACCGTCGTTACGACCGTCCTCGATCATACATTCATCAAAGAAACCTAGAAATGGTGCACAAGAAGCTTCCAAGGGAAAGGCCAACCCTGGAAAAGCTACGATTTTGGCTCTTGGGAAAGCATTCCCTCCTCAACTTGTCCTTCAAGACTACCTAGTCGACGGCTATTTCAAGGACACAAGCTGCGATGATATTGATCTCAAGCAGAAACTCACTCGACTATGTAATTTTAATCTTTCACTCTTTCTTCTTTTTTTTGGAAATATCTCATACTTCATTGATCTGAAAGAACTGAATGGAACTTCTAAGATGACAACAACAGTAAAAACTAGATACGTGGTGATGTCAGAAGAGATCTTGAAGAAGTACCCAGAGCTAGCAAAGGAAGGTCAACCGACCATAAAGCAGAGACTGGAGATTTGCAACAAAGCTGTGACAGAAATGGCCATTGAAGCTTCACAAGCTGCCATTAACAACTGGGGAAGGCCAGCTTCAGACATTACCCACTTAGTCTATGTTTCTTCAAGTGAAGCTCGCTTGCCTGGTGGTGATCTCTTCCTAGCAAGGGGCCTTGGACTCAGCCCTCAAACCCAACGAGTCATGCTTTACTTCACGGGTTGCTCGGGAGGCGTGGCAGGCCTTAGAGTCGCAAAAGACTTAGCTGAAAACAACCCAGGAAGCCGAGTCCTGCTTGTCACCTCTGAAACCACCATTATCGGCTTCAAGCCACCGAGTGTAAATCGTCCATACGATCTCGTAGGCGTGGCACTATTTGGGGATGGTGCAGGGGCGATGGTAATTGGGAGAGACCCTTTTTTGGGCATTGAACGACCACTCTTTGAACTCCACACAACAACCCAGAAATTCATTCCAGATACTCAGAACATAATCGATGGGAAACTGTCGGAGGAAGGTATTAGTTTCACAATAACAAGAGAACTTCCTCAGATAATTGAAGACAACATCGAAAGTTTCTGTGAGACATTTCTTCAAACACTTGGGTTACATGAGAAAGAATACAACAAAATATTCTGGGCAGTACATCCAGGTGGGCCAGCGATATTGAACAGGTTGGAGAAGAGGCTAGAACTGTTACCTGAGAAGCTGACAGCGAGCCGACGAGCTCTGATGGACTATGGAAATGCGAGTAGTAACACGATCGTGTACGTATTGGAATACATGATGGAAGAAAGCTTGAAAATGAAGATGGAAGGTAGGAAAATTGAGGAATGGGGATTGATTCTGGCGTTTGGACCTGGGATTTCATTTGAAGGGATTCTGGCGAGGAATCTTGCCGTATGA 1917 44.55 MATVPDLFRRNGLVGFSDESKQRSSGSTQLHVLAVDDSFVDRKVIERLLKSSSCEVTVVESGRSALQYLGLDGETNSVQFSSALKVNLIITDYSMPEMTGYELLKKIKESSAFREIPVVIMSSENIMARIDSCLKEGAEEFIVKPVKLSDVKRLKDFIMEGENGGKKIDLKRKLHLNHDHNPLSPASPTPSMTAFDQCQGFKQRSPPSLRPSSIIHSSKKPRNGAQEASKGKANPGKATILALGKAFPPQLVLQDYLVDGYFKDTSCDDIDLKQKLTRLCNFNLSLFLLFFGNISYFIDLKELNGTSKMTTTVKTRYVVMSEEILKKYPELAKEGQPTIKQRLEICNKAVTEMAIEASQAAINNWGRPASDITHLVYVSSSEARLPGGDLFLARGLGLSPQTQRVMLYFTGCSGGVAGLRVAKDLAENNPGSRVLLVTSETTIIGFKPPSVNRPYDLVGVALFGDGAGAMVIGRDPFLGIERPLFELHTTTQKFIPDTQNIIDGKLSEEGISFTITRELPQIIEDNIESFCETFLQTLGLHEKEYNKIFWAVHPGGPAILNRLEKRLELLPEKLTASRRALMDYGNASSNTIVYVLEYMMEESLKMKMEGRKIEEWGLILAFGPGISFEGILARNLAV* 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1207077 1211340 + CsaV3_1G001860.1 Csa01g00186 514683

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g00186 638 CDD CHS_like 238 632 - -
Csa01g00186 638 PANTHER TYPE III POLYKETIDE SYNTHASE B 308 636 - -
Csa01g00186 638 PANTHER TYPE III POLYKETIDE SYNTHASE B 230 281 - -
Csa01g00186 638 Gene3D - 29 187 - -
Csa01g00186 638 SUPERFAMILY Thiolase-like 235 477 IPR016039 GO:0016746
Csa01g00186 638 MobiDBLite consensus disorder prediction 198 224 - -
Csa01g00186 638 SMART REC_2 30 155 IPR001789 GO:0000160
Csa01g00186 638 Gene3D - 213 483 IPR016039 GO:0016746
Csa01g00186 638 Gene3D - 484 636 IPR016039 GO:0016746
Csa01g00186 638 ProSiteProfiles Response regulatory domain profile. 31 159 IPR001789 GO:0000160
Csa01g00186 638 MobiDBLite consensus disorder prediction 198 233 - -
Csa01g00186 638 Pfam Chalcone and stilbene synthases, C-terminal domain 486 636 IPR012328 -
Csa01g00186 638 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 308 636 IPR011141 GO:0009058|GO:0016747
Csa01g00186 638 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 230 281 IPR011141 GO:0009058|GO:0016747
Csa01g00186 638 Pfam Chalcone and stilbene synthases, N-terminal domain 310 476 IPR001099 -
Csa01g00186 638 Pfam Chalcone and stilbene synthases, N-terminal domain 227 281 IPR001099 -
Csa01g00186 638 SUPERFAMILY CheY-like 29 154 IPR011006 -
Csa01g00186 638 CDD REC_typeA_ARR 32 154 - -
Csa01g00186 638 Pfam Response regulator receiver domain 32 151 IPR001789 GO:0000160
Csa01g00186 638 SUPERFAMILY Thiolase-like 483 634 IPR016039 GO:0016746
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g00186 - - - csv:101210994 740.339
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g00186 Csa-Chr1:1207077 Csa04g01768 Csa-Chr4:17369346 4.69E-163 dispersed
Csa06g02113 Csa-Chr6:18803860 Csa01g00186 Csa-Chr1:1207077 1.75E-06 dispersed
Csa03g01239 Csa-Chr3:9500060 Csa01g00186 Csa-Chr1:1207077 2.59E-07 transposed
Csa03g02576 Csa-Chr3:24215488 Csa01g00186 Csa-Chr1:1207077 3.94E-94 transposed
Csa05g02855 Csa-Chr5:28884165 Csa01g00186 Csa-Chr1:1207077 3.94E-50 transposed
Csa01g00186 Csa-Chr1:1207077 Csa05g02375 Csa-Chr5:25975705 3.05E-58 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g678 Blo04g00749 Blo16g00206 . . . Bpe13g00265 Bma06g00194 . . . Cma10g00154 . Car10g00145 . Sed08g0172 . . Bhi02g00384 Tan09g2194 Cmetu02g1807 . Hepe09g0164 . . Cla06g01631 Cam06g1813 Cec06g1863 Cco06g1869 Clacu06g1772 Cmu06g1714 Cre06g2534 . . Cone13ag0113 Cone19ag0116 . . . . . . . Bda14g00828 . Bpe15g00623 Bma03g00802 . . Cmo10g00165 . . . . . . Cpe18g00823 . . . . . . . . . . . . . . Lsi06g01513 Csa01g00186 Chy02g02547 Cme02g01933
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Csa04g02646 . 52 346 Response Regulator Gene Family AT3G16857 53.3 4.4e-60 229.6
Csa02g01797 . 52 256 Response Regulator Gene Family AT3G16857 54.2 9.4e-55 211.8
Csa02g00244 . 59 316 Response Regulator Gene Family AT3G16857 51.8 1.3e-51 201.4
Csa04g02646 . 1 412 Response Regulator Gene Family AT4G31920 51.2 7.5e-88 321.6
Csa02g00244 . 13 340 Response Regulator Gene Family AT4G31920 54.8 1.4e-78 290.8
Csa06g01765 CCT,ECH 31 284 Response Regulator Gene Family AT4G31920 55.1 2.9e-71 266.5
Csa03g01497 CCT,ECH 16 270 Response Regulator Gene Family AT4G31920 53.1 6.0e-69 258.8
Csa02g01797 . 11 259 Response Regulator Gene Family AT4G31920 50.8 2.4e-62 236.9
Csa03g01497 CCT,ECH 99 261 Response Regulator Gene Family AT1G67710 53.8 1.8e-39 160.6
Csa01g01861 . 16 390 Response Regulator Gene Family AT2G25180 56.2 5.2e-103 372.1
Csa02g00244 . 17 412 Response Regulator Gene Family AT2G25180 50.1 3.2e-84 309.7
Csa03g01497 CCT,ECH 18 290 Response Regulator Gene Family AT2G25180 54.7 1.7e-77 287.3
Csa02g01797 . 11 256 Response Regulator Gene Family AT2G25180 56.0 4.9e-69 259.2
Csa06g01765 CCT,ECH 92 325 Response Regulator Gene Family AT2G01760 50.6 3.5e-53 205.7
Csa01g01861 . 79 303 Response Regulator Gene Family AT2G01760 53.1 1.8e-49 193.4
Csa02g01797 . 72 259 Response Regulator Gene Family AT2G01760 51.5 1.5e-48 190.3
Csa02g01797 . 9 258 Response Regulator Gene Family AT5G58080 51.0 3.7e-62 236.5
Csa06g01765 CCT,ECH 29 255 Response Regulator Gene Family AT4G16110 66.0 2.6e-79 293.5
Csa03g01497 CCT,ECH 12 241 Response Regulator Gene Family AT4G16110 65.3 2.2e-78 290.4
Csa04g02646 . 12 233 Response Regulator Gene Family AT4G16110 71.0 3.2e-61 233.4
Csa02g01797 . 10 235 Response Regulator Gene Family AT4G16110 54.9 5.2e-59 226.1
Csa01g01861 . 17 249 Response Regulator Gene Family AT4G16110 53.4 6.3e-57 219.2
Csa02g00244 . 12 266 Response Regulator Gene Family AT4G16110 52.0 2.7e-52 203.8
Csa01g00186 . 30 186 Response Regulator Gene Family AT3G48100 69.0 1.1e-51 199.9
Csa05g02375 . 29 162 Response Regulator Gene Family AT3G48100 72.4 5.5e-51 197.6
Csa05g01629 . 11 150 Response Regulator Gene Family AT3G48100 60.0 2.0e-40 162.5
Csa03g03727 CCT 3 161 Response Regulator Gene Family AT3G48100 53.5 5.7e-40 161.0
Csa05g02855 . 103 262 Response Regulator Gene Family AT3G48100 55.9 1.7e-39 159.5
Csa04g01951 CCT 10 156 Response Regulator Gene Family AT3G48100 55.8 2.2e-39 159.1
Csa05g00905 . 26 161 Response Regulator Gene Family AT3G48100 55.9 2.6e-37 152.1
Csa05g02375 . 1 175 Response Regulator Gene Family AT1G59940 65.4 3.4e-56 215.7
Csa01g00186 . 9 158 Response Regulator Gene Family AT1G59940 62.3 5.5e-46 181.8
Csa03g03727 CCT 8 162 Response Regulator Gene Family AT1G59940 55.8 1.5e-40 163.7
Csa05g01629 . 5 151 Response Regulator Gene Family AT1G59940 59.9 3.4e-40 162.5
Csa05g02855 . 98 247 Response Regulator Gene Family AT1G59940 57.3 3.4e-40 162.5
Csa04g01951 CCT 11 154 Response Regulator Gene Family AT1G59940 55.6 1.1e-38 157.5
Csa05g00905 . 24 157 Response Regulator Gene Family AT1G59940 61.2 1.9e-38 156.8
Csa05g02375 . 16 185 Response Regulator Gene Family AT1G10470 67.1 3.7e-55 211.8
Csa01g00186 . 29 167 Response Regulator Gene Family AT1G10470 64.8 3.9e-44 175.3
Csa03g03727 CCT 10 153 Response Regulator Gene Family AT1G10470 58.3 4.4e-40 161.8
Csa05g01629 . 5 156 Response Regulator Gene Family AT1G10470 56.7 1.7e-39 159.8
Csa05g02855 . 98 247 Response Regulator Gene Family AT1G10470 55.3 3.2e-38 155.6
Csa04g01951 CCT 17 154 Response Regulator Gene Family AT1G10470 59.4 4.1e-38 155.2
Csa05g00905 . 26 157 Response Regulator Gene Family AT1G10470 60.6 1.6e-37 153.3
Csa01g00186 . 30 186 Response Regulator Gene Family AT3G48100 69.0 1.1e-51 199.9
Csa05g02375 . 29 162 Response Regulator Gene Family AT3G48100 72.4 5.5e-51 197.6
Csa05g01629 . 11 150 Response Regulator Gene Family AT3G48100 60.0 2.0e-40 162.5
Csa03g03727 CCT 3 161 Response Regulator Gene Family AT3G48100 53.5 5.7e-40 161.0
Csa05g02855 . 103 262 Response Regulator Gene Family AT3G48100 55.9 1.7e-39 159.5
Csa04g01951 CCT 10 156 Response Regulator Gene Family AT3G48100 55.8 2.2e-39 159.1
Csa05g00905 . 26 161 Response Regulator Gene Family AT3G48100 55.9 2.6e-37 152.1
Csa01g00186 . 30 163 Response Regulator Gene Family AT5G62920 76.1 8.0e-50 193.7
Csa05g02375 . 11 175 Response Regulator Gene Family AT5G62920 64.2 1.0e-49 193.4
Csa05g01629 . 9 150 Response Regulator Gene Family AT5G62920 59.2 8.9e-41 163.7
Csa03g03727 CCT 10 155 Response Regulator Gene Family AT5G62920 55.5 1.7e-39 159.5
Csa04g01951 CCT 12 156 Response Regulator Gene Family AT5G62920 56.6 2.9e-39 158.7
Csa05g02855 . 89 262 Response Regulator Gene Family AT5G62920 50.9 4.9e-39 157.9
Csa01g00186 . 29 162 Response Regulator Gene Family AT1G19050 73.1 2.2e-48 189.1
Csa05g02375 . 28 185 Response Regulator Gene Family AT1G19050 60.4 1.1e-44 176.8
Csa03g03727 CCT 8 158 Response Regulator Gene Family AT1G19050 53.0 9.2e-39 157.1
Csa04g01951 CCT 11 156 Response Regulator Gene Family AT1G19050 54.1 7.8e-38 154.1
Csa05g02855 . 100 244 Response Regulator Gene Family AT1G19050 55.2 7.8e-38 154.1
Csa05g01629 . 3 153 Response Regulator Gene Family AT1G19050 52.3 6.6e-37 151.0
Csa04g01951 CCT 8 262 Response Regulator Gene Family AT2G41310 53.7 3.0e-59 225.3
Csa03g03727 CCT 1 159 Response Regulator Gene Family AT2G41310 71.3 9.6e-58 220.3
Csa05g01629 . 1 152 Response Regulator Gene Family AT2G41310 64.5 6.9e-48 187.6
Csa05g02855 . 94 240 Response Regulator Gene Family AT2G41310 67.3 6.9e-48 187.6
Csa06g02147 . 20 161 Response Regulator Gene Family AT2G41310 62.9 6.1e-44 174.5
Csa01g00186 . 28 159 Response Regulator Gene Family AT2G41310 61.9 2.8e-41 165.6
Csa05g02375 . 25 158 Response Regulator Gene Family AT2G41310 58.9 2.8e-41 165.6
Csa05g00905 . 26 161 Response Regulator Gene Family AT2G41310 57.4 3.7e-41 165.2
Csa04g01951 CCT 8 262 Response Regulator Gene Family AT3G57040 53.5 3.9e-62 235.0
Csa03g03727 CCT 1 157 Response Regulator Gene Family AT3G57040 77.1 1.7e-60 229.6
Csa05g01629 . 1 155 Response Regulator Gene Family AT3G57040 66.5 1.3e-49 193.4
Csa05g02855 . 99 240 Response Regulator Gene Family AT3G57040 69.0 5.0e-49 191.4
Csa06g02147 . 20 184 Response Regulator Gene Family AT3G57040 56.6 1.7e-44 176.4
Csa05g02375 . 25 158 Response Regulator Gene Family AT3G57040 59.4 3.1e-43 172.2
Csa01g00186 . 25 159 Response Regulator Gene Family AT3G57040 61.8 3.5e-42 168.7
Csa05g00905 . 24 161 Response Regulator Gene Family AT3G57040 57.9 2.5e-40 162.5
Csa01g00186 . 24 182 Response Regulator Gene Family AT1G74890 68.7 7.2e-52 200.7
Csa05g02375 . 25 187 Response Regulator Gene Family AT1G74890 61.8 2.4e-47 185.7
Csa05g02855 . 93 250 Response Regulator Gene Family AT1G74890 58.2 5.2e-42 167.9
Csa04g01951 CCT 12 175 Response Regulator Gene Family AT1G74890 51.8 5.4e-39 157.9
Csa03g03727 CCT 8 153 Response Regulator Gene Family AT1G74890 54.8 9.2e-39 157.1
Csa05g01629 . 7 145 Response Regulator Gene Family AT1G74890 59.7 1.6e-38 156.4
Csa05g00905 . 26 162 Response Regulator Gene Family AT2G40670 67.4 1.4e-45 179.5
Csa03g03727 CCT 6 155 Response Regulator Gene Family AT2G40670 55.0 1.5e-39 159.5
Csa05g02375 . 26 159 Response Regulator Gene Family AT2G40670 55.5 1.5e-39 159.5
Csa05g00905 . 26 162 Response Regulator Gene Family AT3G56380 66.7 2.0e-46 182.2
Csa05g02375 . 26 159 Response Regulator Gene Family AT3G56380 54.8 2.8e-40 161.8
Csa03g03727 CCT 6 155 Response Regulator Gene Family AT3G56380 55.0 1.8e-39 159.1
Csa01g00186 . 24 160 Response Regulator Gene Family AT3G56380 57.2 5.3e-39 157.5
Csa05g02855 . 93 239 Response Regulator Gene Family AT3G56380 55.4 3.4e-38 154.8
Csa05g01629 . 11 153 Response Regulator Gene Family AT3G56380 56.9 7.6e-38 153.7
Csa04g02646 . 52 346 Response Regulator Gene Family AT3G16857 53.3 4.4e-60 229.6
Csa02g01797 . 52 256 Response Regulator Gene Family AT3G16857 54.2 9.4e-55 211.8
Csa02g00244 . 59 316 Response Regulator Gene Family AT3G16857 51.8 1.3e-51 201.4
Csa06g01765 CCT,ECH 29 255 Response Regulator Gene Family AT4G16110 66.0 2.6e-79 293.5
Csa03g01497 CCT,ECH 12 241 Response Regulator Gene Family AT4G16110 65.3 2.2e-78 290.4
Csa04g02646 . 12 233 Response Regulator Gene Family AT4G16110 71.0 3.2e-61 233.4
Csa02g01797 . 10 235 Response Regulator Gene Family AT4G16110 54.9 5.2e-59 226.1
Csa01g01861 . 17 249 Response Regulator Gene Family AT4G16110 53.4 6.3e-57 219.2
Csa02g00244 . 12 266 Response Regulator Gene Family AT4G16110 52.0 2.7e-52 203.8
Csa04g02646 . 1 412 Response Regulator Gene Family AT4G31920 51.2 7.5e-88 321.6
Csa02g00244 . 13 340 Response Regulator Gene Family AT4G31920 54.8 1.4e-78 290.8
Csa06g01765 CCT,ECH 31 284 Response Regulator Gene Family AT4G31920 55.1 2.9e-71 266.5
Csa03g01497 CCT,ECH 16 270 Response Regulator Gene Family AT4G31920 53.1 6.0e-69 258.8
Csa02g01797 . 11 259 Response Regulator Gene Family AT4G31920 50.8 2.4e-62 236.9
Csa03g01497 CCT,ECH 99 261 Response Regulator Gene Family AT1G67710 53.8 1.8e-39 160.6
Csa01g01861 . 16 390 Response Regulator Gene Family AT2G25180 56.2 5.2e-103 372.1
Csa02g00244 . 17 412 Response Regulator Gene Family AT2G25180 50.1 3.2e-84 309.7
Csa03g01497 CCT,ECH 18 290 Response Regulator Gene Family AT2G25180 54.7 1.7e-77 287.3
Csa02g01797 . 11 256 Response Regulator Gene Family AT2G25180 56.0 4.9e-69 259.2
Csa06g01765 CCT,ECH 92 325 Response Regulator Gene Family AT2G01760 50.6 3.5e-53 205.7
Csa01g01861 . 79 303 Response Regulator Gene Family AT2G01760 53.1 1.8e-49 193.4
Csa02g01797 . 72 259 Response Regulator Gene Family AT2G01760 51.5 1.5e-48 190.3
Csa02g01797 . 9 258 Response Regulator Gene Family AT5G58080 51.0 3.7e-62 236.5
Csa01g00568 . 35 585 Response Regulator Gene Family AT5G61380 50.6 5.9e-142 501.5
Csa04g01435 . 38 206 Response Regulator Gene Family AT5G60100 68.6 8.1e-55 211.5
Csa05g00009 . 50 187 Response Regulator Gene Family AT5G60100 61.6 2.0e-45 180.3
Csa04g01435 . 67 206 Response Regulator Gene Family AT5G24470 55.0 3.2e-38 156.8
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002086 1 1 2 2 1 2 2 2 2 2 2 2 4 2 2 4 2 4 3 2 2 2 2 2 2 2 2 2 2 2 64
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30611 PF00195 Chal_sti_synt_N 1.80E-78 CL0046 Csa TR
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Csa01g00186 Csa_Chr01 FPKM 9.921136 9.77467 13.056374 15.40939 12.917576 11.0117 15.563995 7.714805 7.943962 11.015505