Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g00205 ATGGACCCTTCTAACTTTATGTCCAACAAATGGATTGCAACCGTCCTTGGAATCTGGATTCAATGCATCTGTGGCGCTTCCTACACCTTTAGCATATATTCTTCCGCTCTCAAGTCCACCCAGTCCTACGATCAATCCACCCTCGATACTGTTTCTGTTTTCAAAGACATCGGCGCCAACGCCGGCATAATTTCCGGCTTTCTTTACTCCGCCGTCACTCCCTTTAACCCCCGTCGTGCCTTTGCCGGACCATGGATGGTCCACGCTGCGGGTGCGATTCAGTGGTTCCTTGGATATATTTTCATCTGGGCCGCTGTTTCTGGGGTGATAGATCGACCACCGGTGCCTGCGATGTGCTTCTTTATGTTTCTGGCTGCACATGCGCAGACGTTTTTTAATACGGCGAATGTGGTGACTGGTGTGCATAATTTTGCGAATTATAGTGGGACGATTGTGGGCATCATGAAGGGATATCTTGGTCTCAGTGGAGCACTGCTAATCCAAGTATATAATACGACTTGCAATGAAGATCCAAGCAATTTTCTCCTCATGCTGGCGGTTTTGCCCACAGTTCTTTCCGTCATGTTCATGTGGTTTGTTAGAATTGACAAAACAGAGTCAAGTAACGAGATGAAACATTTGAACTCATTGTCTGCACTTGCTGTGATAGTTGCTTTTTACCTCATGGTTGTCATCATCTTGAACAACGCTTTCTCCCTTTCATCATGGACTCGTTACTTTACATTCTCCATACTCTTGATTCTCCTTGCTGCTCCGCTTGGAATTGCCATTAATGCTCAGAAGGAGGACTTTAGAGGGTCATCTTCATCATTAATCGCCGAAAAAAGTCACGTCGTTAACAAACCTGAGTCAATAGATGCAGAGGATTCTGTTGAATATCATGAGTTGCCCAGGGAAGAGAACCAGATAATGGTTGTTTCCAACACTAGAGCCCCTCAAACCATGAATGTCTTGGAAGCTATACGAACTATAAATTTCTGGTTGTTGTTTCTAGCCATGGTGTGTGGAATGGGTTCTGGATTAGCCACAATAAACAACATGAGCCAACTTGGTCAGTCTCTTGGTTACACAGAAACAGAAACGAAGACATTTGTTTCCTTATGGAGTATATGGAACTTTCTTGGACGTTTTGGAGCTGGTTACACCTCAGATTTTCTTTTCCACACATACGGTTGGGCAAGGCCATTGTTAATGGCAATTACTCTACTTATAATGAGCGGTGGCCACATTGTGATCGCATCCGGTTTCTCTGGGAATCTGTATGTGGGTTCAATTCTTGTTGGCATATGCTACGGCTCACAATGGTCTTTGATGCCTACAATCACTTCAGAGATATTTGGTTTAGAGCACATGGGTACTATTTTCAACACCATAGCCATAGCCAGCCCTTTAGGATCTTACATTTTTTCTGTTCGAGTTATCGGTTACATTTACGACCGAGAAGCTGCCAGAGAACATGGCGCCTGCTCTGGCATACACTGTTTTGTTGTATCGTTTTTTGTTATGGCCATCGTGGCTTTCTTGGGATTTCTTGTTGCTGCTGCACTCTTCTTTCGAACCCGGAGATTTTATCAACTGGCTTCGCAAAGAAGAGTGAATCGTGTTAGTTAA 1632 44.3 MDPSNFMSNKWIATVLGIWIQCICGASYTFSIYSSALKSTQSYDQSTLDTVSVFKDIGANAGIISGFLYSAVTPFNPRRAFAGPWMVHAAGAIQWFLGYIFIWAAVSGVIDRPPVPAMCFFMFLAAHAQTFFNTANVVTGVHNFANYSGTIVGIMKGYLGLSGALLIQVYNTTCNEDPSNFLLMLAVLPTVLSVMFMWFVRIDKTESSNEMKHLNSLSALAVIVAFYLMVVIILNNAFSLSSWTRYFTFSILLILLAAPLGIAINAQKEDFRGSSSSLIAEKSHVVNKPESIDAEDSVEYHELPREENQIMVVSNTRAPQTMNVLEAIRTINFWLLFLAMVCGMGSGLATINNMSQLGQSLGYTETETKTFVSLWSIWNFLGRFGAGYTSDFLFHTYGWARPLLMAITLLIMSGGHIVIASGFSGNLYVGSILVGICYGSQWSLMPTITSEIFGLEHMGTIFNTIAIASPLGSYIFSVRVIGYIYDREAAREHGACSGIHCFVVSFFVMAIVAFLGFLVAAALFFRTRRFYQLASQRRVNRVS* 544
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1319428 1322410 - CsaV3_1G002050.1 Csa01g00205 514702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g00205 543 Gene3D MFS general substrate transporter like domains 323 534 IPR036259 -
Csa01g00205 543 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 6 542 - -
Csa01g00205 543 Pfam Nodulin-like 10 263 IPR010658 -
Csa01g00205 543 SUPERFAMILY MFS general substrate transporter 216 529 IPR036259 -
Csa01g00205 543 Pfam Major Facilitator Superfamily 335 529 IPR011701 GO:0022857|GO:0055085
Csa01g00205 543 CDD MFS_Mch1p_like 10 516 - -
Csa01g00205 543 PANTHER F25A4.25 PROTEIN 6 542 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g00202 Csa-Chr1:1315661 Csa01g00205 Csa-Chr1:1319428 0 dispersed
Csa01g00203 Csa-Chr1:1318330 Csa01g00205 Csa-Chr1:1319428 1.79E-28 dispersed
Csa01g00205 Csa-Chr1:1319428 Csa06g02620 Csa-Chr6:23040506 2.55E-114 dispersed
Csa01g00204 Csa-Chr1:1318885 Csa01g00205 Csa-Chr1:1319428 3.85E-22 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g00205 - - csv:101216789 1063.14