Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g00218 ATGGAGGCTCAACAAGCTTTGGCAACCATTGATGATGACAGAGTTCAATCAACTGGAGAAGGAGATGATAAACAAGCTTCTCCTAATCCTAAACAACATATTCATCTTAAGGTCCCTTCTATGGGTGACTTGGAAAAGCCTTCCATGGAAAATCTTTCAGTCCCATCAGCTTCTAATTCAATAACTTGGAAGGAAGAGGATGATGAGCAACGTCATGAAGAAAGAATGAAAAGGACGAAAGTTGAAATGAGGGAAGTAAAGGAAGAAAACGAGAGGTTAAAGAAATATTTGGATGAAATAATGAAAGATTATGAGACATTGAAAAGGAAATTCCATGAGATTAAGAATAATCATGATGATCAAATTAGAGAAGAAGGCAAAAAATCAACACAAACAAGTGGAAGTACAATAAATAATAATAATAATGATAATGATGACGATCATCAAGTTGAAGCTGAAGTTGATGACATGGTTTCACTCAGATTAGGATCAAGATTCTCAACCCATCATCAAAACAAGAACACTTCTTCTTCTTCCTTATCTCTAACTAATAAGATCTTAGATCTCAAACAAGATTATGTTATTCAAACCCCATCAACTATTGATCACAGTATTCATAGTCCAACCCACAGCGAACCTAAAGATCAGGAAGAAGCCGGACAGACGACTTGGCCGCCGAGTAAAATGCCGAAGCCTGGCGGTTTGCCCTCACCTGCTACCGGAGAAGATGAAGTTTCTCAACAGAATCCTCCTAAGAAAGCTAGGGTTTGTGTTAGAGCTCGATGTGATACTCCAACGATGAACGATGGATGTCAATGGAGAAAATATGGACAAAAGATAGCAAAAGGAAATCCATGCCCTAGAGCTTATTATCGATGCACGGGTGCACCCACTTGTCCCGTTAGAAAACAAGTACAAAGGAGTGTTGATGATATTTCCATACTAATAACAACCTATGAAGGAACTCACAACCATCCTCTACCTGTTTCAGCCATGGCCATGGCTTCCACCACCTCCGCTGCCGCTTCCATGCTACTCTCGGGCCCTTCCTCCTCCACCTCCTCCCAACCTGGCCTAAACCATTCATTTACCGCTCCTGCGACTGCTGCGAATCTTCATGGAATGAACATGTATCTCTCTAACAACACCAATTCAAAGCAATTCTATTTGCCAAACTCTTCAATGCTATCTTCCTCTCTAAACCATCCCACAATCACTCTAGATCTCACTTCAAATCCTCCTTCAACTTCCTCCTCTTCTCCTTTCCATAAAATCCCTTTAATTAATAACAATAATTATCCCCCAAAATATCCCTTCACAAATCTTGACTTTGCCTCTTCACAGCCCAATTTCATGTCTTGGAATAATAACAATAATGCTTATAGTAATATTACCAAAAACAATGCAATAATAGGAATGGGATCGGATTTTGCTAAACAACTTCCTCTTCATACTAACATCTACCAAGCTTGTCTTCAACAACTTTCTAAACCTTCAACGACTCCCCAGCCACCAGCTCTACCAGATACGATAGCAGCGGCAACTAAGGCAATTACATCAGACCCGAGTTTCCAATCGGCATTGGCGGCTGCGTTGAGTTCGATTATCGGAGGCGGGGAGACGGGTCCGAGTGTTTCTAGCTTAGTTGTTGGAGGAGGAGGAGGAGGAGGACAAGGAAGTATGGGGTTTGAGGCAGCTAAGTCGTTAACATGCTCTACTTCTAAGAGTACTCCTTCTTCATCTCCTGGGGATAGTAGAGATAATGGGAAGTGA 1773 41.34 MEAQQALATIDDDRVQSTGEGDDKQASPNPKQHIHLKVPSMGDLEKPSMENLSVPSASNSITWKEEDDEQRHEERMKRTKVEMREVKEENERLKKYLDEIMKDYETLKRKFHEIKNNHDDQIREEGKKSTQTSGSTINNNNNDNDDDHQVEAEVDDMVSLRLGSRFSTHHQNKNTSSSSLSLTNKILDLKQDYVIQTPSTIDHSIHSPTHSEPKDQEEAGQTTWPPSKMPKPGGLPSPATGEDEVSQQNPPKKARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTGAPTCPVRKQVQRSVDDISILITTYEGTHNHPLPVSAMAMASTTSAAASMLLSGPSSSTSSQPGLNHSFTAPATAANLHGMNMYLSNNTNSKQFYLPNSSMLSSSLNHPTITLDLTSNPPSTSSSSPFHKIPLINNNNYPPKYPFTNLDFASSQPNFMSWNNNNNAYSNITKNNAIIGMGSDFAKQLPLHTNIYQACLQQLSKPSTTPQPPALPDTIAAATKAITSDPSFQSALAAALSSIIGGGETGPSVSSLVVGGGGGGGQGSMGFEAAKSLTCSTSKSTPSSSPGDSRDNGK* 591
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1407016 1410875 + CsaV3_1G002180.1 Csa01g00218 514715

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g00218 590 Pfam WRKY DNA -binding domain 268 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
Csa01g00218 590 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 63 546 - -
Csa01g00218 590 SUPERFAMILY WRKY DNA-binding domain 260 328 IPR036576 GO:0003700|GO:0006355|GO:0043565
Csa01g00218 590 MobiDBLite consensus disorder prediction 201 254 - -
Csa01g00218 590 MobiDBLite consensus disorder prediction 1 89 - -
Csa01g00218 590 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 63 546 IPR044810 GO:0003700
Csa01g00218 590 MobiDBLite consensus disorder prediction 62 89 - -
Csa01g00218 590 SMART WRKY_cls 267 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Csa01g00218 590 Coils Coil 69 124 - -
Csa01g00218 590 MobiDBLite consensus disorder prediction 549 590 - -
Csa01g00218 590 MobiDBLite consensus disorder prediction 128 143 - -
Csa01g00218 590 MobiDBLite consensus disorder prediction 15 30 - -
Csa01g00218 590 Gene3D WRKY domain 252 329 IPR036576 GO:0003700|GO:0006355|GO:0043565
Csa01g00218 590 MobiDBLite consensus disorder prediction 114 155 - -
Csa01g00218 590 MobiDBLite consensus disorder prediction 565 590 - -
Csa01g00218 590 ProSiteProfiles WRKY domain profile. 262 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g00218 - - - csv:101213180 1029.62
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Csa01g00787 Csa01g00218 CCT
Csa01g00787 Csa01g00218 ECH
Csa01g00218 Csa01g00787 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g00218 Csa-Chr1:1407016 Csa07g00347 Csa-Chr7:2571163 2.05E-49 dispersed
Csa01g00218 Csa-Chr1:1407016 Csa01g00787 Csa-Chr1:4979523 2.98E-91 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g518 . . Bda06g00552 Bda15g00578 Bpe12g00555 Bpe13g00280 . . . . Cma10g00180 Cma11g00161 Car10g00169 Car11g00139 Sed08g0199 Cpe20g00199 Cpe04g01513 Bhi02g00342 Tan09g2157 Cmetu02g0550 . Hepe09g0135 . . Cla06g01605 Cam06g1779 Cec06g1830 Cco06g1839 Clacu06g1741 Cmu06g1686 Cre06g2502 . . . Cone19ag0085 Lsi02g00307 Csa01g00787 Chy12g01329 Cme12g01756 . . Bda11g01690 Bda14g00841 Bpe07g00791 . Bma03g00818 . Sed08g2579 Cmo10g00198 Cmo11g00149 Cma13g00932 . Car13g00772 . . Cpe18g00805 Bhi08g01407 Tan05g2089 Cmetu12g0663 Lac10g0367 . . . Cla01g01429 Cam01g1496 Cec01g1536 Cco01g1582 Clacu01g1520 Cmu01g1412 Cre01g1330 Lsi06g01483 Csa01g00218 Chy02g02515 Cme02g01901
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Csa07g00267 . 106 379 WRKY Transcription Factor Family AT2G04880 53.5 2.1e-75 280.0
Csa01g00472 . 232 472 WRKY Transcription Factor Family AT5G56270 53.2 8.8e-70 261.9
Csa05g03014 . 13 505 WRKY Transcription Factor Family AT2G03340 51.9 1.9e-117 419.9
Csa01g00472 . 224 485 WRKY Transcription Factor Family AT2G03340 55.7 6.2e-68 255.4
Csa03g00384 . 329 612 WRKY Transcription Factor Family AT2G03340 50.2 3.2e-64 243.0
Csa05g03014 . 140 459 WRKY Transcription Factor Family AT1G13960 53.6 4.0e-82 302.0
Csa01g00472 . 223 486 WRKY Transcription Factor Family AT1G13960 53.8 1.1e-71 267.3
Csa03g00441 . 202 464 WRKY Transcription Factor Family AT1G13960 50.9 2.0e-65 246.5
Csa03g03028 . 160 383 WRKY Transcription Factor Family AT1G13960 52.7 7.7e-65 244.6
Csa05g02490 . 109 346 WRKY Transcription Factor Family AT1G13960 50.8 1.6e-41 167.2
Csa03g00441 . 23 528 WRKY Transcription Factor Family AT4G26640 52.1 6.1e-124 441.4
Csa01g00472 . 224 481 WRKY Transcription Factor Family AT4G26640 52.7 7.3e-69 258.5
Csa01g00472 . 221 471 WRKY Transcription Factor Family AT5G07100 57.7 6.2e-70 260.8
Csa03g03028 . 157 381 WRKY Transcription Factor Family AT5G07100 57.2 4.1e-66 248.1
Csa06g01599 . 146 374 WRKY Transcription Factor Family AT5G07100 53.9 2.0e-60 229.2
Csa01g01888 . 183 507 WRKY Transcription Factor Family AT4G30935 61.0 1.2e-99 360.5
Csa01g00472 . 230 575 WRKY Transcription Factor Family AT2G38470 56.1 1.6e-95 347.1
Csa03g00384 . 331 615 WRKY Transcription Factor Family AT2G38470 51.9 2.8e-68 256.5
Csa03g00441 . 210 452 WRKY Transcription Factor Family AT2G38470 53.7 2.7e-63 240.0
Csa05g03014 . 233 461 WRKY Transcription Factor Family AT2G38470 53.8 3.0e-62 236.5
Csa01g00472 . 232 472 WRKY Transcription Factor Family AT4G26440 52.3 4.9e-66 249.2
Csa03g02485 . 75 166 WRKY Transcription Factor Family AT3G01970 77.2 1.1e-38 156.4
Csa04g00303 . 123 211 WRKY Transcription Factor Family AT3G01970 76.4 1.2e-37 152.9
Csa06g03497 . 113 583 WRKY Transcription Factor Family AT1G62300 53.8 1.9e-107 386.7
Csa01g00787 CCT,ECH 243 407 WRKY Transcription Factor Family AT1G62300 53.3 6.5e-39 159.1
Csa03g01879 . 253 337 WRKY Transcription Factor Family AT1G62300 82.4 1.0e-36 151.8
Csa03g01879 . 95 337 WRKY Transcription Factor Family AT1G68150 51.0 5.3e-53 205.3
Csa01g00218 CCT,ECH 252 357 WRKY Transcription Factor Family AT1G68150 75.5 1.8e-40 163.7
Csa06g03497 . 336 433 WRKY Transcription Factor Family AT1G68150 73.5 1.2e-36 151.0
Csa06g03497 . 51 578 WRKY Transcription Factor Family AT4G22070 52.0 5.2e-110 395.2
Csa03g01879 . 245 336 WRKY Transcription Factor Family AT4G22070 79.3 1.2e-37 154.8
Csa01g00218 CCT,ECH 243 413 WRKY Transcription Factor Family AT4G22070 53.4 1.6e-37 154.5
Csa01g00787 CCT,ECH 239 407 WRKY Transcription Factor Family AT4G22070 55.0 1.6e-37 154.5
Csa06g03497 . 131 579 WRKY Transcription Factor Family AT4G04450 52.1 3.0e-100 362.5
Csa07g00347 . 99 502 WRKY Transcription Factor Family AT4G04450 52.8 4.7e-93 338.6
Csa01g00218 CCT,ECH 252 413 WRKY Transcription Factor Family AT4G04450 59.1 1.6e-40 164.1
Csa07g00347 . 277 365 WRKY Transcription Factor Family AT1G18860 75.3 7.6e-37 152.1
Csa03g01879 . 253 394 WRKY Transcription Factor Family AT5G15130 70.4 8.3e-41 165.2
Csa03g00716 . 110 220 WRKY Transcription Factor Family AT2G44745 81.6 4.5e-52 201.4
Csa02g01560 CCT 127 232 WRKY Transcription Factor Family AT2G44745 70.8 2.4e-37 152.5
Csa06g02834 CCT 139 223 WRKY Transcription Factor Family AT2G44745 78.8 9.1e-37 150.6
Csa02g01560 CCT 127 247 WRKY Transcription Factor Family AT4G39410 73.2 6.7e-46 181.4
Csa06g02834 CCT 118 243 WRKY Transcription Factor Family AT4G39410 67.5 9.1e-43 171.0
Csa03g02453 . 143 333 WRKY Transcription Factor Family AT2G47260 51.2 5.2e-39 158.7
Csa04g00612 . 94 198 WRKY Transcription Factor Family AT5G41570 76.2 2.0e-42 169.1
Csa06g03763 . 97 262 WRKY Transcription Factor Family AT4G18170 56.6 3.3e-43 172.6
Csa07g01176 . 102 224 WRKY Transcription Factor Family AT4G18170 65.9 4.9e-39 158.7
Csa03g01529 CCT,ECH 137 316 WRKY Transcription Factor Family AT5G49520 53.7 1.5e-45 180.6
Csa06g01861 CCT,ECH 62 179 WRKY Transcription Factor Family AT5G49520 71.9 1.8e-43 173.7
Csa07g01176 . 123 250 WRKY Transcription Factor Family AT5G49520 61.7 1.2e-37 154.5
Csa04g00612 . 94 200 WRKY Transcription Factor Family AT1G64000 74.8 1.7e-42 169.5
Csa06g01861 CCT,ECH 62 170 WRKY Transcription Factor Family AT1G69310 68.1 1.7e-38 156.8
Csa06g03763 . 95 252 WRKY Transcription Factor Family AT1G29860 58.8 2.8e-46 182.6
Csa07g01176 . 106 221 WRKY Transcription Factor Family AT1G29860 70.7 1.9e-39 159.8
Csa03g01529 CCT,ECH 141 315 WRKY Transcription Factor Family AT1G29860 50.3 1.5e-36 150.2
Csa04g00303 . 123 213 WRKY Transcription Factor Family AT5G13080 86.8 7.4e-43 170.2
Csa03g02485 . 72 168 WRKY Transcription Factor Family AT5G13080 81.4 1.8e-41 165.6
Csa03g04408 . 1 291 WRKY Transcription Factor Family AT4G31550 62.1 6.2e-88 320.9
Csa03g04408 . 1 351 WRKY Transcription Factor Family AT2G24570 60.6 1.9e-107 386.0
Csa07g01660 . 100 245 WRKY Transcription Factor Family AT2G24570 55.3 1.6e-42 170.2
Csa02g01149 . 193 344 WRKY Transcription Factor Family AT2G24570 54.6 4.0e-41 165.6
Csa02g01149 . 1 349 WRKY Transcription Factor Family AT2G30590 52.1 8.6e-83 304.3
Csa07g01660 . 74 256 WRKY Transcription Factor Family AT2G30590 72.4 5.6e-74 275.0
Csa04g02431 . 216 376 WRKY Transcription Factor Family AT2G30590 59.5 1.4e-45 180.6
Csa02g02744 . 160 285 WRKY Transcription Factor Family AT2G30590 68.2 7.8e-44 174.9
Csa06g02959 . 125 279 WRKY Transcription Factor Family AT2G30590 60.0 1.3e-43 174.1
Csa03g04408 . 167 328 WRKY Transcription Factor Family AT2G30590 56.1 1.6e-41 167.2
Csa01g02192 . 127 270 WRKY Transcription Factor Family AT2G30590 56.5 6.2e-41 165.2
Csa07g01660 . 76 212 WRKY Transcription Factor Family AT3G04670 63.1 1.4e-40 163.7
Csa07g01660 . 78 256 WRKY Transcription Factor Family AT5G28650 70.1 2.0e-64 243.0
Csa06g02959 . 129 287 WRKY Transcription Factor Family AT5G28650 60.4 7.5e-43 171.4
Csa02g02744 . 181 287 WRKY Transcription Factor Family AT5G28650 72.9 7.0e-41 164.9
Csa06g03875 . 225 338 WRKY Transcription Factor Family AT1G30650 86.0 1.5e-54 210.7
Csa03g00861 . 135 230 WRKY Transcription Factor Family AT1G30650 66.1 1.8e-36 150.6
Csa05g00101 . 156 248 WRKY Transcription Factor Family AT4G01250 68.8 4.3e-37 152.1
Csa01g02661 . 148 279 WRKY Transcription Factor Family AT4G01250 57.8 1.6e-36 150.2
Csa05g00101 . 153 248 WRKY Transcription Factor Family AT5G52830 82.3 2.2e-45 179.9
Csa03g00861 . 138 236 WRKY Transcription Factor Family AT5G52830 74.5 1.7e-40 163.7
Csa01g02661 . 3 276 WRKY Transcription Factor Family AT2G34830 51.0 4.9e-58 222.2
Csa06g03875 . 228 338 WRKY Transcription Factor Family AT2G34830 90.1 1.7e-55 213.8
Csa03g00861 . 134 230 WRKY Transcription Factor Family AT2G34830 67.3 9.6e-38 154.8
Csa01g02303 . 49 257 WRKY Transcription Factor Family AT1G29280 52.4 8.2e-53 204.1
Csa07g00476 . 20 298 WRKY Transcription Factor Family AT3G58710 57.2 1.5e-52 203.4
Csa07g00267 . 106 379 WRKY Transcription Factor Family AT2G04880 53.5 2.1e-75 280.0
Csa03g04408 . 1 291 WRKY Transcription Factor Family AT4G31550 62.1 6.2e-88 320.9
Csa03g00716 . 110 220 WRKY Transcription Factor Family AT2G44745 81.6 4.5e-52 201.4
Csa02g01560 CCT 127 232 WRKY Transcription Factor Family AT2G44745 70.8 2.4e-37 152.5
Csa06g02834 CCT 139 223 WRKY Transcription Factor Family AT2G44745 78.8 9.1e-37 150.6
Csa02g01560 CCT 127 247 WRKY Transcription Factor Family AT4G39410 73.2 6.7e-46 181.4
Csa06g02834 CCT 118 243 WRKY Transcription Factor Family AT4G39410 67.5 9.1e-43 171.0
Csa06g03875 . 225 338 WRKY Transcription Factor Family AT1G30650 86.0 1.5e-54 210.7
Csa03g00861 . 135 230 WRKY Transcription Factor Family AT1G30650 66.1 1.8e-36 150.6
Csa03g04408 . 1 351 WRKY Transcription Factor Family AT2G24570 60.6 1.9e-107 386.0
Csa07g01660 . 100 245 WRKY Transcription Factor Family AT2G24570 55.3 1.6e-42 170.2
Csa02g01149 . 193 344 WRKY Transcription Factor Family AT2G24570 54.6 4.0e-41 165.6
Csa01g00472 . 232 472 WRKY Transcription Factor Family AT5G56270 53.2 8.8e-70 261.9
Csa03g00441 . 23 528 WRKY Transcription Factor Family AT4G26640 52.1 6.1e-124 441.4
Csa01g00472 . 224 481 WRKY Transcription Factor Family AT4G26640 52.7 7.3e-69 258.5
Csa02g01149 . 1 349 WRKY Transcription Factor Family AT2G30590 52.1 8.6e-83 304.3
Csa07g01660 . 74 256 WRKY Transcription Factor Family AT2G30590 72.4 5.6e-74 275.0
Csa04g02431 . 216 376 WRKY Transcription Factor Family AT2G30590 59.5 1.4e-45 180.6
Csa02g02744 . 160 285 WRKY Transcription Factor Family AT2G30590 68.2 7.8e-44 174.9
Csa06g02959 . 125 279 WRKY Transcription Factor Family AT2G30590 60.0 1.3e-43 174.1
Csa03g04408 . 167 328 WRKY Transcription Factor Family AT2G30590 56.1 1.6e-41 167.2
Csa01g02192 . 127 270 WRKY Transcription Factor Family AT2G30590 56.5 6.2e-41 165.2
Csa05g00101 . 156 248 WRKY Transcription Factor Family AT4G01250 68.8 4.3e-37 152.1
Csa01g02661 . 148 279 WRKY Transcription Factor Family AT4G01250 57.8 1.6e-36 150.2
Csa03g02453 . 143 333 WRKY Transcription Factor Family AT2G47260 51.2 5.2e-39 158.7
Csa04g00612 . 94 198 WRKY Transcription Factor Family AT5G41570 76.2 2.0e-42 169.1
Csa01g00472 . 221 471 WRKY Transcription Factor Family AT5G07100 57.7 6.2e-70 260.8
Csa03g03028 . 157 381 WRKY Transcription Factor Family AT5G07100 57.2 4.1e-66 248.1
Csa06g01599 . 146 374 WRKY Transcription Factor Family AT5G07100 53.9 2.0e-60 229.2
Csa05g00101 . 153 248 WRKY Transcription Factor Family AT5G52830 82.3 2.2e-45 179.9
Csa03g00861 . 138 236 WRKY Transcription Factor Family AT5G52830 74.5 1.7e-40 163.7
Csa06g03763 . 97 262 WRKY Transcription Factor Family AT4G18170 56.6 3.3e-43 172.6
Csa07g01176 . 102 224 WRKY Transcription Factor Family AT4G18170 65.9 4.9e-39 158.7
Csa05g03014 . 13 505 WRKY Transcription Factor Family AT2G03340 51.9 1.9e-117 419.9
Csa01g00472 . 224 485 WRKY Transcription Factor Family AT2G03340 55.7 6.2e-68 255.4
Csa03g00384 . 329 612 WRKY Transcription Factor Family AT2G03340 50.2 3.2e-64 243.0
Csa06g03497 . 51 578 WRKY Transcription Factor Family AT4G22070 52.0 5.2e-110 395.2
Csa03g01879 . 245 336 WRKY Transcription Factor Family AT4G22070 79.3 1.2e-37 154.8
Csa01g00218 CCT,ECH 243 413 WRKY Transcription Factor Family AT4G22070 53.4 1.6e-37 154.5
Csa01g00787 CCT,ECH 239 407 WRKY Transcription Factor Family AT4G22070 55.0 1.6e-37 154.5
Csa01g01888 . 183 507 WRKY Transcription Factor Family AT4G30935 61.0 1.2e-99 360.5
Csa01g00472 . 230 575 WRKY Transcription Factor Family AT2G38470 56.1 1.6e-95 347.1
Csa03g00384 . 331 615 WRKY Transcription Factor Family AT2G38470 51.9 2.8e-68 256.5
Csa03g00441 . 210 452 WRKY Transcription Factor Family AT2G38470 53.7 2.7e-63 240.0
Csa05g03014 . 233 461 WRKY Transcription Factor Family AT2G38470 53.8 3.0e-62 236.5
Csa01g00472 . 232 472 WRKY Transcription Factor Family AT4G26440 52.3 4.9e-66 249.2
Csa01g02661 . 3 276 WRKY Transcription Factor Family AT2G34830 51.0 4.9e-58 222.2
Csa06g03875 . 228 338 WRKY Transcription Factor Family AT2G34830 90.1 1.7e-55 213.8
Csa03g00861 . 134 230 WRKY Transcription Factor Family AT2G34830 67.3 9.6e-38 154.8
Csa07g01660 . 76 212 WRKY Transcription Factor Family AT3G04670 63.1 1.4e-40 163.7
Csa05g03014 . 140 459 WRKY Transcription Factor Family AT1G13960 53.6 4.0e-82 302.0
Csa01g00472 . 223 486 WRKY Transcription Factor Family AT1G13960 53.8 1.1e-71 267.3
Csa03g00441 . 202 464 WRKY Transcription Factor Family AT1G13960 50.9 2.0e-65 246.5
Csa03g03028 . 160 383 WRKY Transcription Factor Family AT1G13960 52.7 7.7e-65 244.6
Csa05g02490 . 109 346 WRKY Transcription Factor Family AT1G13960 50.8 1.6e-41 167.2
Csa06g03497 . 131 579 WRKY Transcription Factor Family AT4G04450 52.1 3.0e-100 362.5
Csa07g00347 . 99 502 WRKY Transcription Factor Family AT4G04450 52.8 4.7e-93 338.6
Csa01g00218 CCT,ECH 252 413 WRKY Transcription Factor Family AT4G04450 59.1 1.6e-40 164.1
Csa03g02485 . 75 166 WRKY Transcription Factor Family AT3G01970 77.2 1.1e-38 156.4
Csa04g00303 . 123 211 WRKY Transcription Factor Family AT3G01970 76.4 1.2e-37 152.9
Csa03g01529 CCT,ECH 137 316 WRKY Transcription Factor Family AT5G49520 53.7 1.5e-45 180.6
Csa06g01861 CCT,ECH 62 179 WRKY Transcription Factor Family AT5G49520 71.9 1.8e-43 173.7
Csa07g01176 . 123 250 WRKY Transcription Factor Family AT5G49520 61.7 1.2e-37 154.5
Csa04g00612 . 94 200 WRKY Transcription Factor Family AT1G64000 74.8 1.7e-42 169.5
Csa06g01861 CCT,ECH 62 170 WRKY Transcription Factor Family AT1G69310 68.1 1.7e-38 156.8
Csa06g03497 . 113 583 WRKY Transcription Factor Family AT1G62300 53.8 1.9e-107 386.7
Csa01g00787 CCT,ECH 243 407 WRKY Transcription Factor Family AT1G62300 53.3 6.5e-39 159.1
Csa03g01879 . 253 337 WRKY Transcription Factor Family AT1G62300 82.4 1.0e-36 151.8
Csa07g00347 . 277 365 WRKY Transcription Factor Family AT1G18860 75.3 7.6e-37 152.1
Csa01g02303 . 49 257 WRKY Transcription Factor Family AT1G29280 52.4 8.2e-53 204.1
Csa07g00476 . 20 298 WRKY Transcription Factor Family AT3G58710 57.2 1.5e-52 203.4
Csa06g03763 . 95 252 WRKY Transcription Factor Family AT1G29860 58.8 2.8e-46 182.6
Csa07g01176 . 106 221 WRKY Transcription Factor Family AT1G29860 70.7 1.9e-39 159.8
Csa03g01529 CCT,ECH 141 315 WRKY Transcription Factor Family AT1G29860 50.3 1.5e-36 150.2
Csa03g01879 . 253 394 WRKY Transcription Factor Family AT5G15130 70.4 8.3e-41 165.2
Csa07g01660 . 78 256 WRKY Transcription Factor Family AT5G28650 70.1 2.0e-64 243.0
Csa06g02959 . 129 287 WRKY Transcription Factor Family AT5G28650 60.4 7.5e-43 171.4
Csa02g02744 . 181 287 WRKY Transcription Factor Family AT5G28650 72.9 7.0e-41 164.9
Csa04g00303 . 123 213 WRKY Transcription Factor Family AT5G13080 86.8 7.4e-43 170.2
Csa03g02485 . 72 168 WRKY Transcription Factor Family AT5G13080 81.4 1.8e-41 165.6
Csa03g01879 . 95 337 WRKY Transcription Factor Family AT1G68150 51.0 5.3e-53 205.3
Csa01g00218 CCT,ECH 252 357 WRKY Transcription Factor Family AT1G68150 75.5 1.8e-40 163.7
Csa06g03497 . 336 433 WRKY Transcription Factor Family AT1G68150 73.5 1.2e-36 151.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001916 3 3 2 0 2 2 3 2 2 2 2 2 3 2 2 2 2 1 3 2 2 2 1 2 2 2 2 5 3 4 67
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30616 PF03106 WRKY 1.40E-23 CL0274 Csa TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Csa01g00218 Csa_Chr01 FPKM 19.971594 21.285723 5.28776 5.372112 166.401108 142.973465 146.604935 1.108491 0.183416 0.405686