Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g00284 ATGGAGGAAATTACCCCAATCGTCGCCGCCCTTATAACACTCGCCTCCGCCTTCCTCCTCCACCGTGCTTTCTTCCTCCGCCGTAGACTCCGCCTCCCGCCTGGTCCGAAACCATGGCCGATAGTAGGAAACATGCCGCAGATCGGCGAAGCGCATCTCCACTCTCTCCTTGCCACCATGGCCGGAAAGTACGGACCACTGATGTACCTCCGCTTAGGCTCCGTGGACATGGTCGTAGCGGCATCCGCGGCTGTGGCAGAGCAAGTTTTGAAGATTCACGACACTAATTTCCTTAGCCGGCCACCAAACGCCGGCGCAAAATATATTGCTTATAATTATCAGGATATGGTTTTTGCACCGTACGGTCCACGGTGGCGATTGCTCCGGAAGATCAGCACCGTCCATCTCTTCTCATCAAAAGCCCTAGATGATCATCGCCGCATACGGGAGGAAGAGATATCGGTGCTAGTACAGGCCCTTGCAAGGTCCGGTGAAGCTCCAGCGAACTTGGGGAGCTTGCTCACCGTGTGCATTGCGAACTCCCTTGGACGGACAATGATTGGCCGACGTGTTTTCGGTGATGGAAGCGGTAGCGATGACTTAGAGTCAAATCAATTTAAGTTAATGGTGGAGCAAGTGATGGTGCTGGCAGGAAAGTTCAACCCTGGTGACTTTTTCCCCTGGCTTGAGTGGCTTGATTTGATGGGTGTGGGCAGAGAGATGAAGAAGGTCCATAAATGGTTCGATGATTTTTTGACTAAGATCGTGGAGGAGCATCGGAATTTGTTGGCCAGAGGTGTCGGTGGTGGTCACCAAGATCTGTTGAGTACTCTTCTGTCAATGAAGGATGACGGTGAAGATGAGAATGAGAAGCTCAATGATACTGAGATTAAGGCTTTGTTGTTGAACATGTTCACAGCTGGAACCGACACGTCAGCAAGCACGGTGGAATGGGCCTTGACAGAGCTCATTAGACATCCTGAAATGATGGCCCAGGCCCAACAAGAACTGGACTCTATAGTCGGTCGTGATCGGGCAGTTTCCGATGTAGACCTACATCAACTAGTCTATCTCCAGGCCGTGGTGAAGGAAACTTTCCGGCTCCACCCACCGACGCCACTCTCCCTCCCTCGCATGGCGTCCGACAGCTGCGAGGTCAATGGATATCACATCCCCAAAGGCTCCACTCTCTTAGTCGACGTATGGGCCATCGGTCGTGACCCAAAACAATGGGTCGACCCACTCGAGTTCAGGCCCAATCGGTTCCTCCCCAACGGCGAGAAGCCCCACGTGGATGTGAAGGGAAATGACTTTGAGGTGATTCCGTTTGGGGCTGGGCGGAGAATCTGTGTGGGTTTGAGTTTGGGCTTGAGGATGGTCCAGATGTTAACAGCCACGATAGTCCATTCATTTGATTGGACCTTGCCTAATGGGCTTACACCTGATAAGTTGAACATGGATGAGCATTATGGGCTTACTCTTCGCCGGGCCCAGCCTTTGATCATGCATCCACGACCCAGGTTATTACTTGGGGTTTATGAAAGGGATAGTTACGAATATAGCAACTAA 1569 52.01 MEEITPIVAALITLASAFLLHRAFFLRRRLRLPPGPKPWPIVGNMPQIGEAHLHSLLATMAGKYGPLMYLRLGSVDMVVAASAAVAEQVLKIHDTNFLSRPPNAGAKYIAYNYQDMVFAPYGPRWRLLRKISTVHLFSSKALDDHRRIREEEISVLVQALARSGEAPANLGSLLTVCIANSLGRTMIGRRVFGDGSGSDDLESNQFKLMVEQVMVLAGKFNPGDFFPWLEWLDLMGVGREMKKVHKWFDDFLTKIVEEHRNLLARGVGGGHQDLLSTLLSMKDDGEDENEKLNDTEIKALLLNMFTAGTDTSASTVEWALTELIRHPEMMAQAQQELDSIVGRDRAVSDVDLHQLVYLQAVVKETFRLHPPTPLSLPRMASDSCEVNGYHIPKGSTLLVDVWAIGRDPKQWVDPLEFRPNRFLPNGEKPHVDVKGNDFEVIPFGAGRRICVGLSLGLRMVQMLTATIVHSFDWTLPNGLTPDKLNMDEHYGLTLRRAQPLIMHPRPRLLLGVYERDSYEYSN* 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1788086 1791498 + CsaV3_1G002840.1 Csa01g00284 514781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g00284 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Csa01g00284 522 PANTHER FLAVONOID 3'-MONOOXYGENASE 13 505 - -
Csa01g00284 522 Gene3D Cytochrome P450 26 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g00284 522 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 13 505 - -
Csa01g00284 522 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g00284 522 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g00284 522 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g00284 522 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g00284 522 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g00284 522 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g00284 522 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g00284 522 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g00284 522 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g00284 522 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g00284 522 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g00284 522 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g00284 522 SUPERFAMILY Cytochrome P450 33 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa01g00284 522 Pfam Cytochrome P450 33 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g00284 Csa-Chr1:1788086 Csa03g02763 Csa-Chr3:26495596 2.13E-135 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g00284 K05280 - csv:101207160 1008.44