Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g00472 ATGGCCTCCTCTTCCGGGAGCTTAGACACCTCTGCTAATTCTCACCCCTCCTTCACTTTCTCTACTCATCCTTTTATGACTTCTTCTTACTCTGACCTTCTTGCCTCTGCCAACATCGATCCTCCTTCCTCCGCTCCTCTCCGCGCTTCCACTACCGGAGTTCCTAAATTCAAATCCCTCCCTCCCCCTTCTCTCCCTCTCTCTCCGCCCCCCATGTCTCCTTCTTCCTTTTTCGCCATTCCTCCTGGTTTGAGTCCCGCCGAGCTTCTTGATTCCCCTGTTCTTCTTAGTGCTTCTCATGTTCTGCCGTCGCCGACCACCGGGACTTTCCCGTCTCACTCGTTGAATTGGAAGAGCAATTTTGGATATAATCAGCAGAACATTAAGGAAGAAAACAAATATTCGTCTAATTTCTCATTTCAAACTCAATCCTCAAAGCTCCCGCCGACGTCTTTTCAGCCTTCATCCACCATAGCTCCCACCACTCAGGGATGGAGTTTTCAAGAACAGCGCAAGAAGGAGGATAGTTTTTCGTCCGAGAAGAATATGGTAAAGCCGGAGTTTGGATCGATGCGGAGCTTCTCACCGGAATATGGGGTTGTTCAAAACCAGAGCCAAAACAACGGCAGCGGGGAATTGCGGTCTGACTATGGCAACAATTATCCTCAACAATCTCAGACAGTGAATCGAAGGTCGGACGACGGCTACAACTGGAGAAAATACGGCCAAAAACAGGTTAAAGGAAGTGAAAATCCGAGAAGCTATTACAAGTGCACTTTCCCCAATTGCCCAACAAAGAAAAAGGTCGAAAGATCCTTAGATGGACAGATCACGGAGATCGTTTACAAAGGCAGCCATAACCATCCCAAGCCCCAATCCACGAGGAGGTCGTCGCTGTCATCGGCCGGTTCTTCTCAAGCCATAGTGGCTTTGAATCAGGCCGCTAACGAGATGGCGGACCAGTCATTTACAACCCAAGGCAGTGGCCAATTTGACGGCGTTGCAACACCGGAGAATTCCTCGATTTCAATCGGCGACGAAGACTTCGATCGGAGCTCTCAGAAGAGCAAATCCGGAGGGGACGATTTTGATGAGGAAGAACCAGAGGCTAAGAGATGGCGAAGGGAAGGTGACAACAATGAAGGTATTTCGGCTGCCGGCAGCCGGACGGTGAGAGAGCCGAGAGTCGTCGTCCAAACTACCAGCGACATCGACATTCTCGACGATGGTTACCGGTGGAGGAAGTACGGCCAGAAAGTTGTGAAGGGAAACCCAAATCCAAGGAGTTACTACAAATGCACAAATCCAGGATGTCCAGTAAGAAAGCATGTGGAGAGAGCTTCACATGATCTAAGGGCAGTGATAACAACCTATGAAGGGAAGCACAACCACGATGTTCCACCGGCACGTGGCAGTGGAAGCCATTCCCTCAGCCGTCCATTCCCTAACAACGAGCCTCCTGCCGCGATTCGCCCATTATCGGTAGTGACCCATCACTCAAACAACGGAGGGCATCCGCAGGGTCTACGGCTGCAGCGATCTTCGGATTCCCAAGCAGCGTTCACAGTGGAAATGGTGCAAAATGGGAATGGATTTTCATTCCCAGAATTTGGAAACTCAATGGGAATGGGATCCTACATGAACCAAACACAGCCCAATGACAATTTGTTCACAAGAGCCAAAGAAGAGCCAAGAGATCATGATATGTTCATCCAATCTCTCCTATGTTAA 1731 49.68 MASSSGSLDTSANSHPSFTFSTHPFMTSSYSDLLASANIDPPSSAPLRASTTGVPKFKSLPPPSLPLSPPPMSPSSFFAIPPGLSPAELLDSPVLLSASHVLPSPTTGTFPSHSLNWKSNFGYNQQNIKEENKYSSNFSFQTQSSKLPPTSFQPSSTIAPTTQGWSFQEQRKKEDSFSSEKNMVKPEFGSMRSFSPEYGVVQNQSQNNGSGELRSDYGNNYPQQSQTVNRRSDDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLDGQITEIVYKGSHNHPKPQSTRRSSLSSAGSSQAIVALNQAANEMADQSFTTQGSGQFDGVATPENSSISIGDEDFDRSSQKSKSGGDDFDEEEPEAKRWRREGDNNEGISAAGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASHDLRAVITTYEGKHNHDVPPARGSGSHSLSRPFPNNEPPAAIRPLSVVTHHSNNGGHPQGLRLQRSSDSQAAFTVEMVQNGNGFSFPEFGNSMGMGSYMNQTQPNDNLFTRAKEEPRDHDMFIQSLLC* 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2993098 2996444 + CsaV3_1G004720.1 Csa01g00472 514969

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g00472 576 MobiDBLite consensus disorder prediction 137 237 - -
Csa01g00472 576 MobiDBLite consensus disorder prediction 344 379 - -
Csa01g00472 576 Gene3D WRKY domain 219 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Csa01g00472 576 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 46 548 - -
Csa01g00472 576 ProSiteProfiles WRKY domain profile. 233 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Csa01g00472 576 SUPERFAMILY WRKY DNA-binding domain 231 291 IPR036576 GO:0003700|GO:0006355|GO:0043565
Csa01g00472 576 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 46 548 IPR044810 GO:0003700
Csa01g00472 576 Pfam WRKY DNA -binding domain 408 464 IPR003657 GO:0003700|GO:0006355|GO:0043565
Csa01g00472 576 Pfam WRKY DNA -binding domain 233 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Csa01g00472 576 MobiDBLite consensus disorder prediction 41 68 - -
Csa01g00472 576 MobiDBLite consensus disorder prediction 324 343 - -
Csa01g00472 576 MobiDBLite consensus disorder prediction 137 167 - -
Csa01g00472 576 MobiDBLite consensus disorder prediction 282 305 - -
Csa01g00472 576 ProSiteProfiles WRKY domain profile. 402 467 IPR003657 GO:0003700|GO:0006355|GO:0043565
Csa01g00472 576 MobiDBLite consensus disorder prediction 324 390 - -
Csa01g00472 576 MobiDBLite consensus disorder prediction 196 232 - -
Csa01g00472 576 SMART WRKY_cls 407 466 IPR003657 GO:0003700|GO:0006355|GO:0043565
Csa01g00472 576 SMART WRKY_cls 232 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Csa01g00472 576 Gene3D WRKY domain 394 460 IPR036576 GO:0003700|GO:0006355|GO:0043565
Csa01g00472 576 SUPERFAMILY WRKY DNA-binding domain 399 467 IPR036576 GO:0003700|GO:0006355|GO:0043565
Csa01g00472 576 MobiDBLite consensus disorder prediction 287 305 - -
Csa01g00472 576 MobiDBLite consensus disorder prediction 459 485 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g00472 K13424 WRKY33; WRKY transcription factor 33 - csv:101207158 1137.87
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g00472 Csa-Chr1:2993098 Csa03g03028 Csa-Chr3:28698684 1.43E-116 dispersed
Csa06g03497 Csa-Chr6:28610615 Csa01g00472 Csa-Chr1:2993098 5.56E-13 dispersed
Csa07g00347 Csa-Chr7:2571163 Csa01g00472 Csa-Chr1:2993098 3.70E-13 dispersed
Csa01g00472 Csa-Chr1:2993098 Csa05g03014 Csa-Chr5:30396040 9.99E-86 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Csa07g00267 . 106 379 WRKY Transcription Factor Family AT2G04880 53.5 2.1e-75 280.0
Csa01g00472 . 232 472 WRKY Transcription Factor Family AT5G56270 53.2 8.8e-70 261.9
Csa05g03014 . 13 505 WRKY Transcription Factor Family AT2G03340 51.9 1.9e-117 419.9
Csa01g00472 . 224 485 WRKY Transcription Factor Family AT2G03340 55.7 6.2e-68 255.4
Csa03g00384 . 329 612 WRKY Transcription Factor Family AT2G03340 50.2 3.2e-64 243.0
Csa05g03014 . 140 459 WRKY Transcription Factor Family AT1G13960 53.6 4.0e-82 302.0
Csa01g00472 . 223 486 WRKY Transcription Factor Family AT1G13960 53.8 1.1e-71 267.3
Csa03g00441 . 202 464 WRKY Transcription Factor Family AT1G13960 50.9 2.0e-65 246.5
Csa03g03028 . 160 383 WRKY Transcription Factor Family AT1G13960 52.7 7.7e-65 244.6
Csa05g02490 . 109 346 WRKY Transcription Factor Family AT1G13960 50.8 1.6e-41 167.2
Csa03g00441 . 23 528 WRKY Transcription Factor Family AT4G26640 52.1 6.1e-124 441.4
Csa01g00472 . 224 481 WRKY Transcription Factor Family AT4G26640 52.7 7.3e-69 258.5
Csa01g00472 . 221 471 WRKY Transcription Factor Family AT5G07100 57.7 6.2e-70 260.8
Csa03g03028 . 157 381 WRKY Transcription Factor Family AT5G07100 57.2 4.1e-66 248.1
Csa06g01599 . 146 374 WRKY Transcription Factor Family AT5G07100 53.9 2.0e-60 229.2
Csa01g01888 . 183 507 WRKY Transcription Factor Family AT4G30935 61.0 1.2e-99 360.5
Csa01g00472 . 230 575 WRKY Transcription Factor Family AT2G38470 56.1 1.6e-95 347.1
Csa03g00384 . 331 615 WRKY Transcription Factor Family AT2G38470 51.9 2.8e-68 256.5
Csa03g00441 . 210 452 WRKY Transcription Factor Family AT2G38470 53.7 2.7e-63 240.0
Csa05g03014 . 233 461 WRKY Transcription Factor Family AT2G38470 53.8 3.0e-62 236.5
Csa01g00472 . 232 472 WRKY Transcription Factor Family AT4G26440 52.3 4.9e-66 249.2
Csa03g02485 . 75 166 WRKY Transcription Factor Family AT3G01970 77.2 1.1e-38 156.4
Csa04g00303 . 123 211 WRKY Transcription Factor Family AT3G01970 76.4 1.2e-37 152.9
Csa06g03497 . 113 583 WRKY Transcription Factor Family AT1G62300 53.8 1.9e-107 386.7
Csa01g00787 CCT,ECH 243 407 WRKY Transcription Factor Family AT1G62300 53.3 6.5e-39 159.1
Csa03g01879 . 253 337 WRKY Transcription Factor Family AT1G62300 82.4 1.0e-36 151.8
Csa03g01879 . 95 337 WRKY Transcription Factor Family AT1G68150 51.0 5.3e-53 205.3
Csa01g00218 CCT,ECH 252 357 WRKY Transcription Factor Family AT1G68150 75.5 1.8e-40 163.7
Csa06g03497 . 336 433 WRKY Transcription Factor Family AT1G68150 73.5 1.2e-36 151.0
Csa06g03497 . 51 578 WRKY Transcription Factor Family AT4G22070 52.0 5.2e-110 395.2
Csa03g01879 . 245 336 WRKY Transcription Factor Family AT4G22070 79.3 1.2e-37 154.8
Csa01g00218 CCT,ECH 243 413 WRKY Transcription Factor Family AT4G22070 53.4 1.6e-37 154.5
Csa01g00787 CCT,ECH 239 407 WRKY Transcription Factor Family AT4G22070 55.0 1.6e-37 154.5
Csa06g03497 . 131 579 WRKY Transcription Factor Family AT4G04450 52.1 3.0e-100 362.5
Csa07g00347 . 99 502 WRKY Transcription Factor Family AT4G04450 52.8 4.7e-93 338.6
Csa01g00218 CCT,ECH 252 413 WRKY Transcription Factor Family AT4G04450 59.1 1.6e-40 164.1
Csa07g00347 . 277 365 WRKY Transcription Factor Family AT1G18860 75.3 7.6e-37 152.1
Csa03g01879 . 253 394 WRKY Transcription Factor Family AT5G15130 70.4 8.3e-41 165.2
Csa03g00716 . 110 220 WRKY Transcription Factor Family AT2G44745 81.6 4.5e-52 201.4
Csa02g01560 CCT 127 232 WRKY Transcription Factor Family AT2G44745 70.8 2.4e-37 152.5
Csa06g02834 CCT 139 223 WRKY Transcription Factor Family AT2G44745 78.8 9.1e-37 150.6
Csa02g01560 CCT 127 247 WRKY Transcription Factor Family AT4G39410 73.2 6.7e-46 181.4
Csa06g02834 CCT 118 243 WRKY Transcription Factor Family AT4G39410 67.5 9.1e-43 171.0
Csa03g02453 . 143 333 WRKY Transcription Factor Family AT2G47260 51.2 5.2e-39 158.7
Csa04g00612 . 94 198 WRKY Transcription Factor Family AT5G41570 76.2 2.0e-42 169.1
Csa06g03763 . 97 262 WRKY Transcription Factor Family AT4G18170 56.6 3.3e-43 172.6
Csa07g01176 . 102 224 WRKY Transcription Factor Family AT4G18170 65.9 4.9e-39 158.7
Csa03g01529 CCT,ECH 137 316 WRKY Transcription Factor Family AT5G49520 53.7 1.5e-45 180.6
Csa06g01861 CCT,ECH 62 179 WRKY Transcription Factor Family AT5G49520 71.9 1.8e-43 173.7
Csa07g01176 . 123 250 WRKY Transcription Factor Family AT5G49520 61.7 1.2e-37 154.5
Csa04g00612 . 94 200 WRKY Transcription Factor Family AT1G64000 74.8 1.7e-42 169.5
Csa06g01861 CCT,ECH 62 170 WRKY Transcription Factor Family AT1G69310 68.1 1.7e-38 156.8
Csa06g03763 . 95 252 WRKY Transcription Factor Family AT1G29860 58.8 2.8e-46 182.6
Csa07g01176 . 106 221 WRKY Transcription Factor Family AT1G29860 70.7 1.9e-39 159.8
Csa03g01529 CCT,ECH 141 315 WRKY Transcription Factor Family AT1G29860 50.3 1.5e-36 150.2
Csa04g00303 . 123 213 WRKY Transcription Factor Family AT5G13080 86.8 7.4e-43 170.2
Csa03g02485 . 72 168 WRKY Transcription Factor Family AT5G13080 81.4 1.8e-41 165.6
Csa03g04408 . 1 291 WRKY Transcription Factor Family AT4G31550 62.1 6.2e-88 320.9
Csa03g04408 . 1 351 WRKY Transcription Factor Family AT2G24570 60.6 1.9e-107 386.0
Csa07g01660 . 100 245 WRKY Transcription Factor Family AT2G24570 55.3 1.6e-42 170.2
Csa02g01149 . 193 344 WRKY Transcription Factor Family AT2G24570 54.6 4.0e-41 165.6
Csa02g01149 . 1 349 WRKY Transcription Factor Family AT2G30590 52.1 8.6e-83 304.3
Csa07g01660 . 74 256 WRKY Transcription Factor Family AT2G30590 72.4 5.6e-74 275.0
Csa04g02431 . 216 376 WRKY Transcription Factor Family AT2G30590 59.5 1.4e-45 180.6
Csa02g02744 . 160 285 WRKY Transcription Factor Family AT2G30590 68.2 7.8e-44 174.9
Csa06g02959 . 125 279 WRKY Transcription Factor Family AT2G30590 60.0 1.3e-43 174.1
Csa03g04408 . 167 328 WRKY Transcription Factor Family AT2G30590 56.1 1.6e-41 167.2
Csa01g02192 . 127 270 WRKY Transcription Factor Family AT2G30590 56.5 6.2e-41 165.2
Csa07g01660 . 76 212 WRKY Transcription Factor Family AT3G04670 63.1 1.4e-40 163.7
Csa07g01660 . 78 256 WRKY Transcription Factor Family AT5G28650 70.1 2.0e-64 243.0
Csa06g02959 . 129 287 WRKY Transcription Factor Family AT5G28650 60.4 7.5e-43 171.4
Csa02g02744 . 181 287 WRKY Transcription Factor Family AT5G28650 72.9 7.0e-41 164.9
Csa06g03875 . 225 338 WRKY Transcription Factor Family AT1G30650 86.0 1.5e-54 210.7
Csa03g00861 . 135 230 WRKY Transcription Factor Family AT1G30650 66.1 1.8e-36 150.6
Csa05g00101 . 156 248 WRKY Transcription Factor Family AT4G01250 68.8 4.3e-37 152.1
Csa01g02661 . 148 279 WRKY Transcription Factor Family AT4G01250 57.8 1.6e-36 150.2
Csa05g00101 . 153 248 WRKY Transcription Factor Family AT5G52830 82.3 2.2e-45 179.9
Csa03g00861 . 138 236 WRKY Transcription Factor Family AT5G52830 74.5 1.7e-40 163.7
Csa01g02661 . 3 276 WRKY Transcription Factor Family AT2G34830 51.0 4.9e-58 222.2
Csa06g03875 . 228 338 WRKY Transcription Factor Family AT2G34830 90.1 1.7e-55 213.8
Csa03g00861 . 134 230 WRKY Transcription Factor Family AT2G34830 67.3 9.6e-38 154.8
Csa01g02303 . 49 257 WRKY Transcription Factor Family AT1G29280 52.4 8.2e-53 204.1
Csa07g00476 . 20 298 WRKY Transcription Factor Family AT3G58710 57.2 1.5e-52 203.4
Csa07g00267 . 106 379 WRKY Transcription Factor Family AT2G04880 53.5 2.1e-75 280.0
Csa03g04408 . 1 291 WRKY Transcription Factor Family AT4G31550 62.1 6.2e-88 320.9
Csa03g00716 . 110 220 WRKY Transcription Factor Family AT2G44745 81.6 4.5e-52 201.4
Csa02g01560 CCT 127 232 WRKY Transcription Factor Family AT2G44745 70.8 2.4e-37 152.5
Csa06g02834 CCT 139 223 WRKY Transcription Factor Family AT2G44745 78.8 9.1e-37 150.6
Csa02g01560 CCT 127 247 WRKY Transcription Factor Family AT4G39410 73.2 6.7e-46 181.4
Csa06g02834 CCT 118 243 WRKY Transcription Factor Family AT4G39410 67.5 9.1e-43 171.0
Csa06g03875 . 225 338 WRKY Transcription Factor Family AT1G30650 86.0 1.5e-54 210.7
Csa03g00861 . 135 230 WRKY Transcription Factor Family AT1G30650 66.1 1.8e-36 150.6
Csa03g04408 . 1 351 WRKY Transcription Factor Family AT2G24570 60.6 1.9e-107 386.0
Csa07g01660 . 100 245 WRKY Transcription Factor Family AT2G24570 55.3 1.6e-42 170.2
Csa02g01149 . 193 344 WRKY Transcription Factor Family AT2G24570 54.6 4.0e-41 165.6
Csa01g00472 . 232 472 WRKY Transcription Factor Family AT5G56270 53.2 8.8e-70 261.9
Csa03g00441 . 23 528 WRKY Transcription Factor Family AT4G26640 52.1 6.1e-124 441.4
Csa01g00472 . 224 481 WRKY Transcription Factor Family AT4G26640 52.7 7.3e-69 258.5
Csa02g01149 . 1 349 WRKY Transcription Factor Family AT2G30590 52.1 8.6e-83 304.3
Csa07g01660 . 74 256 WRKY Transcription Factor Family AT2G30590 72.4 5.6e-74 275.0
Csa04g02431 . 216 376 WRKY Transcription Factor Family AT2G30590 59.5 1.4e-45 180.6
Csa02g02744 . 160 285 WRKY Transcription Factor Family AT2G30590 68.2 7.8e-44 174.9
Csa06g02959 . 125 279 WRKY Transcription Factor Family AT2G30590 60.0 1.3e-43 174.1
Csa03g04408 . 167 328 WRKY Transcription Factor Family AT2G30590 56.1 1.6e-41 167.2
Csa01g02192 . 127 270 WRKY Transcription Factor Family AT2G30590 56.5 6.2e-41 165.2
Csa05g00101 . 156 248 WRKY Transcription Factor Family AT4G01250 68.8 4.3e-37 152.1
Csa01g02661 . 148 279 WRKY Transcription Factor Family AT4G01250 57.8 1.6e-36 150.2
Csa03g02453 . 143 333 WRKY Transcription Factor Family AT2G47260 51.2 5.2e-39 158.7
Csa04g00612 . 94 198 WRKY Transcription Factor Family AT5G41570 76.2 2.0e-42 169.1
Csa01g00472 . 221 471 WRKY Transcription Factor Family AT5G07100 57.7 6.2e-70 260.8
Csa03g03028 . 157 381 WRKY Transcription Factor Family AT5G07100 57.2 4.1e-66 248.1
Csa06g01599 . 146 374 WRKY Transcription Factor Family AT5G07100 53.9 2.0e-60 229.2
Csa05g00101 . 153 248 WRKY Transcription Factor Family AT5G52830 82.3 2.2e-45 179.9
Csa03g00861 . 138 236 WRKY Transcription Factor Family AT5G52830 74.5 1.7e-40 163.7
Csa06g03763 . 97 262 WRKY Transcription Factor Family AT4G18170 56.6 3.3e-43 172.6
Csa07g01176 . 102 224 WRKY Transcription Factor Family AT4G18170 65.9 4.9e-39 158.7
Csa05g03014 . 13 505 WRKY Transcription Factor Family AT2G03340 51.9 1.9e-117 419.9
Csa01g00472 . 224 485 WRKY Transcription Factor Family AT2G03340 55.7 6.2e-68 255.4
Csa03g00384 . 329 612 WRKY Transcription Factor Family AT2G03340 50.2 3.2e-64 243.0
Csa06g03497 . 51 578 WRKY Transcription Factor Family AT4G22070 52.0 5.2e-110 395.2
Csa03g01879 . 245 336 WRKY Transcription Factor Family AT4G22070 79.3 1.2e-37 154.8
Csa01g00218 CCT,ECH 243 413 WRKY Transcription Factor Family AT4G22070 53.4 1.6e-37 154.5
Csa01g00787 CCT,ECH 239 407 WRKY Transcription Factor Family AT4G22070 55.0 1.6e-37 154.5
Csa01g01888 . 183 507 WRKY Transcription Factor Family AT4G30935 61.0 1.2e-99 360.5
Csa01g00472 . 230 575 WRKY Transcription Factor Family AT2G38470 56.1 1.6e-95 347.1
Csa03g00384 . 331 615 WRKY Transcription Factor Family AT2G38470 51.9 2.8e-68 256.5
Csa03g00441 . 210 452 WRKY Transcription Factor Family AT2G38470 53.7 2.7e-63 240.0
Csa05g03014 . 233 461 WRKY Transcription Factor Family AT2G38470 53.8 3.0e-62 236.5
Csa01g00472 . 232 472 WRKY Transcription Factor Family AT4G26440 52.3 4.9e-66 249.2
Csa01g02661 . 3 276 WRKY Transcription Factor Family AT2G34830 51.0 4.9e-58 222.2
Csa06g03875 . 228 338 WRKY Transcription Factor Family AT2G34830 90.1 1.7e-55 213.8
Csa03g00861 . 134 230 WRKY Transcription Factor Family AT2G34830 67.3 9.6e-38 154.8
Csa07g01660 . 76 212 WRKY Transcription Factor Family AT3G04670 63.1 1.4e-40 163.7
Csa05g03014 . 140 459 WRKY Transcription Factor Family AT1G13960 53.6 4.0e-82 302.0
Csa01g00472 . 223 486 WRKY Transcription Factor Family AT1G13960 53.8 1.1e-71 267.3
Csa03g00441 . 202 464 WRKY Transcription Factor Family AT1G13960 50.9 2.0e-65 246.5
Csa03g03028 . 160 383 WRKY Transcription Factor Family AT1G13960 52.7 7.7e-65 244.6
Csa05g02490 . 109 346 WRKY Transcription Factor Family AT1G13960 50.8 1.6e-41 167.2
Csa06g03497 . 131 579 WRKY Transcription Factor Family AT4G04450 52.1 3.0e-100 362.5
Csa07g00347 . 99 502 WRKY Transcription Factor Family AT4G04450 52.8 4.7e-93 338.6
Csa01g00218 CCT,ECH 252 413 WRKY Transcription Factor Family AT4G04450 59.1 1.6e-40 164.1
Csa03g02485 . 75 166 WRKY Transcription Factor Family AT3G01970 77.2 1.1e-38 156.4
Csa04g00303 . 123 211 WRKY Transcription Factor Family AT3G01970 76.4 1.2e-37 152.9
Csa03g01529 CCT,ECH 137 316 WRKY Transcription Factor Family AT5G49520 53.7 1.5e-45 180.6
Csa06g01861 CCT,ECH 62 179 WRKY Transcription Factor Family AT5G49520 71.9 1.8e-43 173.7
Csa07g01176 . 123 250 WRKY Transcription Factor Family AT5G49520 61.7 1.2e-37 154.5
Csa04g00612 . 94 200 WRKY Transcription Factor Family AT1G64000 74.8 1.7e-42 169.5
Csa06g01861 CCT,ECH 62 170 WRKY Transcription Factor Family AT1G69310 68.1 1.7e-38 156.8
Csa06g03497 . 113 583 WRKY Transcription Factor Family AT1G62300 53.8 1.9e-107 386.7
Csa01g00787 CCT,ECH 243 407 WRKY Transcription Factor Family AT1G62300 53.3 6.5e-39 159.1
Csa03g01879 . 253 337 WRKY Transcription Factor Family AT1G62300 82.4 1.0e-36 151.8
Csa07g00347 . 277 365 WRKY Transcription Factor Family AT1G18860 75.3 7.6e-37 152.1
Csa01g02303 . 49 257 WRKY Transcription Factor Family AT1G29280 52.4 8.2e-53 204.1
Csa07g00476 . 20 298 WRKY Transcription Factor Family AT3G58710 57.2 1.5e-52 203.4
Csa06g03763 . 95 252 WRKY Transcription Factor Family AT1G29860 58.8 2.8e-46 182.6
Csa07g01176 . 106 221 WRKY Transcription Factor Family AT1G29860 70.7 1.9e-39 159.8
Csa03g01529 CCT,ECH 141 315 WRKY Transcription Factor Family AT1G29860 50.3 1.5e-36 150.2
Csa03g01879 . 253 394 WRKY Transcription Factor Family AT5G15130 70.4 8.3e-41 165.2
Csa07g01660 . 78 256 WRKY Transcription Factor Family AT5G28650 70.1 2.0e-64 243.0
Csa06g02959 . 129 287 WRKY Transcription Factor Family AT5G28650 60.4 7.5e-43 171.4
Csa02g02744 . 181 287 WRKY Transcription Factor Family AT5G28650 72.9 7.0e-41 164.9
Csa04g00303 . 123 213 WRKY Transcription Factor Family AT5G13080 86.8 7.4e-43 170.2
Csa03g02485 . 72 168 WRKY Transcription Factor Family AT5G13080 81.4 1.8e-41 165.6
Csa03g01879 . 95 337 WRKY Transcription Factor Family AT1G68150 51.0 5.3e-53 205.3
Csa01g00218 CCT,ECH 252 357 WRKY Transcription Factor Family AT1G68150 75.5 1.8e-40 163.7
Csa06g03497 . 336 433 WRKY Transcription Factor Family AT1G68150 73.5 1.2e-36 151.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008119 2 1 1 2 1 1 1 1 1 0 1 1 2 1 1 2 1 2 1 1 1 1 1 1 1 1 1 2 0 1 34
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30642 PF03106 WRKY 3.50E-25 CL0274 Csa TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Csa01g00472 Csa_Chr01 FPKM 0.115359 0.301954 0.0 0.0 0.393454 0.371426 0.351138 0.0 0.0 0.042762