Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa01g00519 ATGACCAGTACTACTACTCAACAACTCTCTGTTCTGTCTCTCATTTCCTTCATTCTTCTGATCTCTACCGCAGTTTCTTATTCAGAAGCCCATGGCTTAAACATGAACGCCATTGACAGATGCTGGAGATCCAACCCATACTGGAGAAAAAACAGACAACAACTCGCCACTTGTTCAGTAGGTTTCGCCGGAAAAATGACCAACAACATGGGAAGAAATCTCATGCACTACCAAGTCACTGACCCAAGCGATGACCCTATAAACCCACGTCCAGGTACTCTCAGATACGGCGCCACAATGATCAAACACAAAGTCTGGATCACATTTAAAAAAGACATGCACATTGTGCTTCAGAAGCCTCTTCTTGTCAGCAGCTTCACCGCCATCGACGGCCGAGGCTCCACCGTCCACATCACCGGAAACGCCTGTCTGATGGTGGTCAGAGCCACCAACATTATAATCCACGGCCTTATCATCCACCACTGCAAGTCTCAGGCGGCGGGTCAAGTCATGGGTCCCAATGCTAAGGTAATTTCACTTGGAAACGTGGACGGAGATGCCATCCGTTTAGTAACGGCCTCGAAAGTTTGGATTGACCACAACACGCTGTACCGGTGCGAGGATGGGTTGCTCGACGTCACCCGTGGGTCCACTGACATAACCATTTCCAACAATTGGTTCCGGGACCAAGACAAGGTTATTCTTCTTGGTCATGATGATGGCTATGTTAGAGATCGGAGCATGAGAGTCACTGTCCTCTATAACCATTTTGGACCAAATTGTAACCAAAGAATGCCCAGGATTCGATATGGGTATGCACACGTTGCAAACAATTTATACCAAGGTTGGACGCAATACGCAATCGGAGGGAGCATGAACCCGAGCGTGAAGAGTGAAGCCAACCTTTTCATCGCATCAAAGTCAAAACAAGTCATATGGAGCACAGGGAAAGTAGAGGAGGCAAAATGGAAGTTTCACTCAGTGAGAGACGCATTTGAAAACGGAGCATCGTTTGCAGAAATTGGAGTGGGGAAAGGAAGAGTAAAGCCAAATTACAATCCCCAACAGCGGTTTCCAGTGGCAGATGCTAAGTGGATCAGAGCATTGACAAGCTCATCCGGGGCATTGCGCTGCACATCAAATTCTAAATGCTGA 1155 47.53 MTSTTTQQLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMTNNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLVSSFTAIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDAIRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRSMRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASKSKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADAKWIRALTSSSGALRCTSNSKC* 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3450230 3451850 + CsaV3_1G005190.1 Csa01g00519 515016

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Csa01g00519 384 PRINTS Pollen allergen Amb family signature 58 75 IPR018082 -
Csa01g00519 384 PRINTS Pollen allergen Amb family signature 120 136 IPR018082 -
Csa01g00519 384 PRINTS Pollen allergen Amb family signature 184 205 IPR018082 -
Csa01g00519 384 PRINTS Pollen allergen Amb family signature 264 283 IPR018082 -
Csa01g00519 384 PRINTS Pollen allergen Amb family signature 286 305 IPR018082 -
Csa01g00519 384 PRINTS Pollen allergen Amb family signature 355 378 IPR018082 -
Csa01g00519 384 PANTHER PECTATE LYASE 18-RELATED 15 381 IPR045032 GO:0030570
Csa01g00519 384 SUPERFAMILY Pectin lyase-like 35 375 IPR011050 -
Csa01g00519 384 Pfam Pectate lyase 125 303 IPR002022 -
Csa01g00519 384 PANTHER PECTATE LYASE 15 381 - -
Csa01g00519 384 SMART amb_all 112 309 IPR002022 -
Csa01g00519 384 Gene3D - 35 377 IPR012334 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa01g00519 K01728 pel; pectate lyase [EC:4.2.2.2] - csv:101217103 729.554
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g00519 Csa-Chr1:3450230 Csa06g03495 Csa-Chr6:28593144 3.19E-103 dispersed
Csa01g00519 Csa-Chr1:3450230 Csa01g01041 Csa-Chr1:6486533 1.67E-109 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Csa01g00913 . 33 414 Polysaccharide Lyase AT4G24780 82.8 5.6e-189 657.1
Csa05g01868 . 28 419 Polysaccharide Lyase AT4G24780 75.4 4.6e-183 637.5
Csa02g01789 . 33 416 Polysaccharide Lyase AT4G24780 74.5 1.2e-180 629.4
Csa02g00989 . 69 450 Polysaccharide Lyase AT4G24780 72.8 7.8e-175 610.1
Csa03g01128 . 67 448 Polysaccharide Lyase AT4G24780 74.4 6.6e-174 607.1
Csa03g02663 . 53 434 Polysaccharide Lyase AT4G24780 69.7 2.2e-169 592.0
Csa05g02772 . 35 413 Polysaccharide Lyase AT4G24780 63.9 1.8e-150 529.3
Csa06g02614 . 39 417 Polysaccharide Lyase AT4G24780 62.3 3.4e-146 515.0
Csa02g01684 . 37 419 Polysaccharide Lyase AT4G24780 60.6 3.0e-142 501.9
Csa01g00790 . 48 440 Polysaccharide Lyase AT4G24780 57.8 1.1e-133 473.4
Csa05g02422 CCT,ECH 45 433 Polysaccharide Lyase AT4G24780 56.8 1.9e-128 456.1
Csa06g02231 . 46 436 Polysaccharide Lyase AT4G24780 55.2 1.8e-126 449.5
Csa03g03864 CCT,ECH 51 442 Polysaccharide Lyase AT4G24780 53.1 2.2e-124 442.6
Csa01g01041 CCT 35 382 Polysaccharide Lyase AT4G24780 57.3 1.1e-117 420.2
Csa06g03495 CCT 9 381 Polysaccharide Lyase AT4G24780 53.1 2.0e-117 419.5
Csa04g01452 . 1 373 Polysaccharide Lyase AT3G09540 63.5 6.1e-134 474.2
Csa01g01041 CCT 9 382 Polysaccharide Lyase AT1G11920 69.4 1.8e-160 562.4
Csa06g03495 CCT 24 381 Polysaccharide Lyase AT1G11920 72.5 1.5e-159 559.3
Csa02g01789 . 67 416 Polysaccharide Lyase AT1G11920 59.8 1.7e-123 439.5
Csa03g02663 . 85 434 Polysaccharide Lyase AT1G11920 61.0 1.7e-123 439.5
Csa01g00913 . 65 414 Polysaccharide Lyase AT1G11920 59.5 5.5e-122 434.5
Csa03g01128 . 99 448 Polysaccharide Lyase AT1G11920 58.7 1.6e-121 433.0
Csa05g01868 . 70 419 Polysaccharide Lyase AT1G11920 58.4 8.9e-120 427.2
Csa02g00989 . 101 450 Polysaccharide Lyase AT1G11920 58.7 5.7e-119 424.5
Csa05g02772 . 62 413 Polysaccharide Lyase AT1G11920 58.1 9.8e-119 423.7
Csa02g01684 . 63 413 Polysaccharide Lyase AT1G11920 57.7 1.3e-118 423.3
Csa06g02614 . 77 417 Polysaccharide Lyase AT1G11920 56.7 1.2e-111 400.2
Csa03g03864 CCT,ECH 84 442 Polysaccharide Lyase AT1G11920 53.5 1.6e-108 389.8
Csa01g00790 . 84 440 Polysaccharide Lyase AT1G11920 53.2 2.5e-106 382.5
Csa05g02422 CCT,ECH 75 433 Polysaccharide Lyase AT1G11920 52.9 1.2e-105 380.2
Csa06g02231 . 76 436 Polysaccharide Lyase AT1G11920 53.2 6.2e-105 377.9
Csa01g00790 . 21 440 Polysaccharide Lyase AT1G14420 59.9 8.0e-160 560.5
Csa03g03864 CCT,ECH 16 442 Polysaccharide Lyase AT1G14420 59.6 1.4e-159 559.7
Csa05g02422 CCT,ECH 10 433 Polysaccharide Lyase AT1G14420 60.1 3.1e-156 548.5
Csa06g02231 . 3 436 Polysaccharide Lyase AT1G14420 58.7 6.4e-149 524.2
Csa02g01789 . 45 416 Polysaccharide Lyase AT1G14420 55.3 6.2e-128 454.5
Csa02g00989 . 97 450 Polysaccharide Lyase AT1G14420 57.2 5.2e-127 451.4
Csa06g02614 . 27 418 Polysaccharide Lyase AT1G14420 51.5 7.6e-126 447.6
Csa03g01128 . 95 448 Polysaccharide Lyase AT1G14420 56.7 9.2e-124 440.7
Csa03g02663 . 81 434 Polysaccharide Lyase AT1G14420 56.4 3.5e-123 438.7
Csa05g01868 . 66 419 Polysaccharide Lyase AT1G14420 55.6 3.9e-122 435.3
Csa02g01684 . 42 416 Polysaccharide Lyase AT1G14420 54.8 1.5e-121 433.3
Csa01g00913 . 61 414 Polysaccharide Lyase AT1G14420 54.4 7.3e-121 431.0
Csa05g02772 . 23 414 Polysaccharide Lyase AT1G14420 51.0 6.9e-119 424.5
Csa06g03495 CCT 33 381 Polysaccharide Lyase AT1G14420 52.9 2.0e-102 369.8
Csa03g02663 . 66 434 Polysaccharide Lyase AT3G07010 84.8 9.2e-194 672.9
Csa02g00989 . 82 450 Polysaccharide Lyase AT3G07010 82.7 1.1e-186 649.4
Csa03g01128 . 80 448 Polysaccharide Lyase AT3G07010 81.8 3.9e-184 641.0
Csa02g01789 . 47 416 Polysaccharide Lyase AT3G07010 74.6 4.2e-170 594.3
Csa01g00913 . 45 414 Polysaccharide Lyase AT3G07010 73.0 7.4e-167 583.6
Csa05g01868 . 45 419 Polysaccharide Lyase AT3G07010 72.7 7.4e-167 583.6
Csa05g02772 . 67 413 Polysaccharide Lyase AT3G07010 66.3 1.4e-144 509.6
Csa06g02614 . 72 417 Polysaccharide Lyase AT3G07010 65.9 8.8e-144 506.9
Csa02g01684 . 70 413 Polysaccharide Lyase AT3G07010 64.8 1.3e-139 493.0
Csa01g00790 . 75 440 Polysaccharide Lyase AT3G07010 60.5 4.4e-135 478.0
Csa06g02231 . 66 436 Polysaccharide Lyase AT3G07010 61.2 1.1e-133 473.4
Csa03g03864 CCT,ECH 75 442 Polysaccharide Lyase AT3G07010 58.7 1.1e-130 463.4
Csa05g02422 CCT,ECH 65 433 Polysaccharide Lyase AT3G07010 60.2 1.9e-130 462.6
Csa06g03495 CCT 26 381 Polysaccharide Lyase AT3G07010 57.0 2.6e-119 425.6
Csa01g01041 CCT 35 382 Polysaccharide Lyase AT3G07010 56.4 5.4e-117 417.9
Csa02g00989 . 65 450 Polysaccharide Lyase AT4G13210 79.3 4.0e-185 644.4
Csa03g02663 . 49 434 Polysaccharide Lyase AT4G13210 78.3 1.5e-184 642.5
Csa03g01128 . 42 448 Polysaccharide Lyase AT4G13210 77.2 6.4e-183 637.1
Csa02g01789 . 34 416 Polysaccharide Lyase AT4G13210 70.6 4.6e-165 577.8
Csa01g00913 . 32 414 Polysaccharide Lyase AT4G13210 72.9 1.0e-164 576.6
Csa05g01868 . 40 419 Polysaccharide Lyase AT4G13210 66.7 6.1e-157 550.8
Csa06g02614 . 41 393 Polysaccharide Lyase AT4G13210 65.7 2.7e-141 498.8
Csa02g01684 . 38 391 Polysaccharide Lyase AT4G13210 64.7 3.6e-141 498.4
Csa05g02772 . 32 389 Polysaccharide Lyase AT4G13210 62.6 2.4e-137 485.7
Csa01g00790 . 75 440 Polysaccharide Lyase AT4G13210 59.1 8.2e-130 460.7
Csa05g02422 CCT,ECH 46 392 Polysaccharide Lyase AT4G13210 61.1 4.2e-126 448.4
Csa03g03864 CCT,ECH 75 442 Polysaccharide Lyase AT4G13210 56.3 4.7e-125 444.9
Csa06g02231 . 50 393 Polysaccharide Lyase AT4G13210 61.0 8.0e-125 444.1
Csa01g01041 CCT 35 382 Polysaccharide Lyase AT4G13210 57.1 9.1e-113 404.1
Csa06g03495 CCT 33 381 Polysaccharide Lyase AT4G13210 55.6 1.0e-111 400.6
Csa02g00989 . 21 450 Polysaccharide Lyase AT4G13710 80.3 5.0e-207 717.2
Csa03g01128 . 40 448 Polysaccharide Lyase AT4G13710 79.2 3.6e-197 684.5
Csa03g02663 . 32 434 Polysaccharide Lyase AT4G13710 77.5 4.1e-193 671.0
Csa02g01789 . 36 416 Polysaccharide Lyase AT4G13710 73.7 5.1e-175 610.9
Csa05g01868 . 43 419 Polysaccharide Lyase AT4G13710 71.0 2.1e-168 589.0
Csa01g00913 . 31 414 Polysaccharide Lyase AT4G13710 70.9 2.7e-168 588.6
Csa06g02614 . 41 418 Polysaccharide Lyase AT4G13710 66.7 2.5e-153 538.9
Csa05g02772 . 36 414 Polysaccharide Lyase AT4G13710 65.2 1.2e-152 536.6
Csa02g01684 . 38 416 Polysaccharide Lyase AT4G13710 63.1 1.1e-145 513.5
Csa01g00790 . 88 440 Polysaccharide Lyase AT4G13710 62.7 5.0e-138 488.0
Csa06g02231 . 47 436 Polysaccharide Lyase AT4G13710 59.5 4.6e-136 481.5
Csa05g02422 CCT,ECH 46 433 Polysaccharide Lyase AT4G13710 59.5 1.4e-135 479.9
Csa03g03864 CCT,ECH 52 442 Polysaccharide Lyase AT4G13710 57.3 9.7e-134 473.8
Csa06g03495 CCT 26 381 Polysaccharide Lyase AT4G13710 56.7 5.2e-119 424.9
Csa01g01041 CCT 35 382 Polysaccharide Lyase AT4G13710 56.7 2.6e-118 422.5
Csa01g01041 CCT 6 381 Polysaccharide Lyase AT4G22080 67.4 7.1e-157 550.4
Csa06g03495 CCT 8 380 Polysaccharide Lyase AT4G22080 66.7 6.0e-148 520.8
Csa02g01789 . 67 415 Polysaccharide Lyase AT4G22080 59.1 6.1e-124 441.0
Csa03g02663 . 85 433 Polysaccharide Lyase AT4G22080 57.7 2.9e-118 422.2
Csa01g00913 . 65 413 Polysaccharide Lyase AT4G22080 57.4 1.4e-117 419.9
Csa05g01868 . 70 418 Polysaccharide Lyase AT4G22080 57.1 1.4e-117 419.9
Csa02g00989 . 101 449 Polysaccharide Lyase AT4G22080 56.3 1.4e-115 413.3
Csa02g01684 . 75 419 Polysaccharide Lyase AT4G22080 58.1 2.0e-114 409.5
Csa03g01128 . 99 447 Polysaccharide Lyase AT4G22080 55.7 1.3e-113 406.8
Csa05g02772 . 73 417 Polysaccharide Lyase AT4G22080 56.6 2.4e-112 402.5
Csa06g02614 . 77 417 Polysaccharide Lyase AT4G22080 55.6 8.5e-110 394.0
Csa03g03864 CCT,ECH 64 441 Polysaccharide Lyase AT4G22080 51.8 9.4e-109 390.6
Csa01g00790 . 92 439 Polysaccharide Lyase AT4G22080 53.7 4.4e-106 381.7
Csa05g02422 CCT,ECH 83 432 Polysaccharide Lyase AT4G22080 54.0 8.3e-105 377.5
Csa06g02231 . 84 435 Polysaccharide Lyase AT4G22080 51.4 5.0e-102 368.2
Csa01g01041 CCT 20 381 Polysaccharide Lyase AT4G22090 69.4 6.7e-155 543.9
Csa06g03495 CCT 32 380 Polysaccharide Lyase AT4G22090 69.9 1.3e-147 519.6
Csa02g01789 . 67 415 Polysaccharide Lyase AT4G22090 59.1 1.8e-123 439.5
Csa05g01868 . 70 418 Polysaccharide Lyase AT4G22090 56.6 4.5e-119 424.9
Csa01g00913 . 65 413 Polysaccharide Lyase AT4G22090 57.4 5.9e-119 424.5
Csa03g02663 . 85 433 Polysaccharide Lyase AT4G22090 56.9 7.7e-119 424.1
Csa02g00989 . 101 449 Polysaccharide Lyase AT4G22090 55.4 1.4e-115 413.3
Csa03g01128 . 99 447 Polysaccharide Lyase AT4G22090 55.1 3.3e-114 408.7
Csa02g01684 . 75 419 Polysaccharide Lyase AT4G22090 57.2 6.3e-113 404.4
Csa05g02772 . 73 417 Polysaccharide Lyase AT4G22090 55.2 2.2e-110 396.0
Csa06g02614 . 77 417 Polysaccharide Lyase AT4G22090 55.3 2.5e-109 392.5
Csa03g03864 CCT,ECH 87 441 Polysaccharide Lyase AT4G22090 52.7 3.0e-107 385.6
Csa01g00790 . 87 439 Polysaccharide Lyase AT4G22090 53.7 9.7e-106 380.6
Csa05g02422 CCT,ECH 78 432 Polysaccharide Lyase AT4G22090 53.2 1.1e-104 377.1
Csa06g02231 . 79 435 Polysaccharide Lyase AT4G22090 51.0 7.2e-101 364.4
Csa05g02772 . 22 444 Polysaccharide Lyase AT3G54920 64.3 1.0e-163 573.5
Csa02g01684 . 13 422 Polysaccharide Lyase AT3G54920 66.3 4.9e-163 571.2
Csa06g02614 . 25 424 Polysaccharide Lyase AT3G54920 66.7 3.3e-159 558.5
Csa02g01789 . 35 407 Polysaccharide Lyase AT3G54920 59.5 6.1e-137 484.6
Csa02g00989 . 67 439 Polysaccharide Lyase AT3G54920 59.3 5.2e-136 481.5
Csa03g01128 . 65 439 Polysaccharide Lyase AT3G54920 58.2 9.7e-135 477.2
Csa03g02663 . 51 425 Polysaccharide Lyase AT3G54920 58.2 5.3e-133 471.5
Csa01g00913 . 35 405 Polysaccharide Lyase AT3G54920 59.3 7.0e-133 471.1
Csa05g01868 . 22 410 Polysaccharide Lyase AT3G54920 56.4 1.2e-132 470.3
Csa01g00790 . 88 429 Polysaccharide Lyase AT3G54920 61.4 2.7e-121 432.6
Csa06g02231 . 80 427 Polysaccharide Lyase AT3G54920 57.7 3.5e-116 415.6
Csa05g02422 CCT,ECH 45 422 Polysaccharide Lyase AT3G54920 54.4 5.7e-111 398.3
Csa03g03864 CCT,ECH 50 431 Polysaccharide Lyase AT3G54920 51.7 8.3e-110 394.4
Csa01g01041 CCT 35 371 Polysaccharide Lyase AT3G54920 54.1 3.6e-105 379.0
Csa06g03495 CCT 33 370 Polysaccharide Lyase AT3G54920 53.5 1.2e-103 374.0
Csa03g03864 CCT,ECH 6 442 Polysaccharide Lyase AT5G15110 57.7 1.0e-162 570.1
Csa01g00790 . 12 440 Polysaccharide Lyase AT5G15110 55.2 1.5e-153 539.7
Csa06g02231 . 10 436 Polysaccharide Lyase AT5G15110 57.8 8.2e-152 533.9
Csa05g02422 CCT,ECH 10 433 Polysaccharide Lyase AT5G15110 56.0 2.9e-149 525.4
Csa02g00989 . 74 450 Polysaccharide Lyase AT5G15110 57.0 5.4e-127 451.4
Csa03g02663 . 81 434 Polysaccharide Lyase AT5G15110 59.0 4.3e-124 441.8
Csa02g01789 . 63 416 Polysaccharide Lyase AT5G15110 57.0 8.0e-123 437.6
Csa03g01128 . 95 448 Polysaccharide Lyase AT5G15110 58.1 1.2e-121 433.7
Csa05g01868 . 47 419 Polysaccharide Lyase AT5G15110 55.3 9.8e-121 430.6
Csa01g00913 . 61 414 Polysaccharide Lyase AT5G15110 57.6 1.6e-118 423.3
Csa06g02614 . 73 417 Polysaccharide Lyase AT5G15110 54.2 9.5e-116 414.1
Csa05g02772 . 69 413 Polysaccharide Lyase AT5G15110 55.6 4.9e-112 401.7
Csa02g01684 . 71 413 Polysaccharide Lyase AT5G15110 53.6 1.1e-108 390.6
Csa06g03495 CCT 33 381 Polysaccharide Lyase AT5G15110 50.6 4.4e-97 352.1
Csa03g02663 . 49 434 Polysaccharide Lyase AT5G48900 85.8 5.0e-201 697.2
Csa02g00989 . 65 450 Polysaccharide Lyase AT5G48900 81.3 2.7e-191 664.8
Csa03g01128 . 63 448 Polysaccharide Lyase AT5G48900 80.1 9.7e-189 656.4
Csa02g01789 . 34 416 Polysaccharide Lyase AT5G48900 74.7 7.5e-173 603.6
Csa05g01868 . 20 419 Polysaccharide Lyase AT5G48900 69.0 6.8e-166 580.5
Csa01g00913 . 32 414 Polysaccharide Lyase AT5G48900 71.0 1.5e-165 579.3
Csa06g02614 . 40 421 Polysaccharide Lyase AT5G48900 63.9 6.0e-146 514.2
Csa05g02772 . 32 413 Polysaccharide Lyase AT5G48900 61.7 2.4e-142 502.3
Csa02g01684 . 38 413 Polysaccharide Lyase AT5G48900 62.8 6.4e-140 494.2
Csa01g00790 . 34 440 Polysaccharide Lyase AT5G48900 57.8 1.8e-134 476.1
Csa06g02231 . 3 436 Polysaccharide Lyase AT5G48900 54.4 3.5e-130 461.8
Csa05g02422 CCT,ECH 46 433 Polysaccharide Lyase AT5G48900 58.5 9.6e-128 453.8
Csa03g03864 CCT,ECH 74 442 Polysaccharide Lyase AT5G48900 57.2 1.8e-126 449.5
Csa01g01041 CCT 35 382 Polysaccharide Lyase AT5G48900 57.3 4.2e-115 411.8
Csa06g03495 CCT 26 381 Polysaccharide Lyase AT5G48900 57.0 5.5e-115 411.4
Csa01g00913 . 33 414 Polysaccharide Lyase AT5G63180 80.7 1.2e-189 659.4
Csa02g01789 . 33 416 Polysaccharide Lyase AT5G63180 76.9 4.0e-185 644.4
Csa05g01868 . 34 419 Polysaccharide Lyase AT5G63180 77.9 8.8e-185 643.3
Csa02g00989 . 69 450 Polysaccharide Lyase AT5G63180 70.8 7.3e-171 597.0
Csa03g02663 . 53 434 Polysaccharide Lyase AT5G63180 71.6 1.6e-170 595.9
Csa03g01128 . 67 448 Polysaccharide Lyase AT5G63180 70.3 2.2e-167 585.5
Csa06g02614 . 40 417 Polysaccharide Lyase AT5G63180 64.2 9.2e-150 526.9
Csa05g02772 . 36 417 Polysaccharide Lyase AT5G63180 63.0 8.6e-148 520.4
Csa02g01684 . 38 419 Polysaccharide Lyase AT5G63180 61.7 4.4e-144 508.1
Csa01g00790 . 65 440 Polysaccharide Lyase AT5G63180 61.2 2.2e-135 479.2
Csa06g02231 . 45 436 Polysaccharide Lyase AT5G63180 57.1 6.6e-132 467.6
Csa05g02422 CCT,ECH 46 433 Polysaccharide Lyase AT5G63180 57.3 1.5e-128 456.4
Csa03g03864 CCT,ECH 77 442 Polysaccharide Lyase AT5G63180 58.0 3.4e-128 455.3
Csa01g01041 CCT 35 382 Polysaccharide Lyase AT5G63180 58.8 2.2e-119 426.0
Csa06g03495 CCT 26 381 Polysaccharide Lyase AT5G63180 56.8 1.6e-117 419.9
Csa05g01868 . 65 419 Polysaccharide Lyase AT5G55720 59.2 2.9e-126 448.7
Csa03g01128 . 94 448 Polysaccharide Lyase AT5G55720 60.8 1.9e-125 446.0
Csa03g02663 . 80 434 Polysaccharide Lyase AT5G55720 60.1 4.6e-124 441.4
Csa02g01789 . 34 416 Polysaccharide Lyase AT5G55720 56.6 1.0e-123 440.3
Csa02g00989 . 96 450 Polysaccharide Lyase AT5G55720 59.7 8.7e-123 437.2
Csa01g00913 . 60 414 Polysaccharide Lyase AT5G55720 58.8 7.4e-122 434.1
Csa02g01684 . 56 414 Polysaccharide Lyase AT5G55720 57.3 5.3e-120 427.9
Csa05g02772 . 54 413 Polysaccharide Lyase AT5G55720 56.9 6.1e-116 414.5
Csa06g02614 . 56 407 Polysaccharide Lyase AT5G55720 57.1 4.3e-114 408.3
Csa01g01041 CCT 33 382 Polysaccharide Lyase AT5G55720 55.4 1.5e-111 399.8
Csa06g03495 CCT 33 381 Polysaccharide Lyase AT5G55720 54.3 2.3e-107 386.0
Csa05g02422 CCT,ECH 76 433 Polysaccharide Lyase AT5G55720 53.6 8.8e-107 384.0
Csa06g02231 . 84 436 Polysaccharide Lyase AT5G55720 53.1 3.3e-106 382.1
Csa03g03864 CCT,ECH 74 442 Polysaccharide Lyase AT5G55720 51.4 7.4e-106 380.9
Csa01g00790 . 92 440 Polysaccharide Lyase AT5G55720 55.0 1.4e-104 376.7
Csa02g00989 . 21 449 Polysaccharide Lyase AT3G24230 71.4 9.0e-180 626.7
Csa03g01128 . 3 447 Polysaccharide Lyase AT3G24230 68.0 1.3e-175 612.8
Csa03g02663 . 36 433 Polysaccharide Lyase AT3G24230 71.4 6.4e-170 594.0
Csa02g01789 . 34 415 Polysaccharide Lyase AT3G24230 68.6 2.3e-159 558.9
Csa01g00913 . 29 413 Polysaccharide Lyase AT3G24230 66.8 2.6e-155 545.4
Csa05g01868 . 43 418 Polysaccharide Lyase AT3G24230 66.5 9.3e-153 537.0
Csa05g02772 . 32 417 Polysaccharide Lyase AT3G24230 60.6 4.5e-139 491.5
Csa02g01684 . 38 413 Polysaccharide Lyase AT3G24230 61.7 3.8e-138 488.4
Csa06g02614 . 41 417 Polysaccharide Lyase AT3G24230 61.5 4.2e-137 485.0
Csa06g02231 . 41 435 Polysaccharide Lyase AT3G24230 57.7 1.2e-128 456.8
Csa01g00790 . 56 439 Polysaccharide Lyase AT3G24230 57.0 1.8e-127 453.0
Csa05g02422 CCT,ECH 46 432 Polysaccharide Lyase AT3G24230 58.4 8.2e-125 444.1
Csa03g03864 CCT,ECH 52 441 Polysaccharide Lyase AT3G24230 54.9 2.9e-122 435.6
Csa01g01041 CCT 33 381 Polysaccharide Lyase AT3G24230 58.2 1.8e-116 416.4
Csa06g03495 CCT 18 380 Polysaccharide Lyase AT3G24230 55.9 1.3e-114 410.2
Csa02g00989 . 65 449 Polysaccharide Lyase AT1G04680 78.1 2.8e-183 638.3
Csa03g01128 . 39 447 Polysaccharide Lyase AT1G04680 75.5 1.5e-179 625.9
Csa03g02663 . 49 433 Polysaccharide Lyase AT1G04680 73.5 2.2e-175 612.1
Csa01g00913 . 29 413 Polysaccharide Lyase AT1G04680 70.2 1.1e-155 546.6
Csa02g01789 . 34 415 Polysaccharide Lyase AT1G04680 64.2 3.2e-150 528.5
Csa05g01868 . 45 418 Polysaccharide Lyase AT1G04680 63.6 8.1e-146 513.8
Csa05g02772 . 32 417 Polysaccharide Lyase AT1G04680 57.5 3.5e-133 471.9
Csa06g02614 . 41 417 Polysaccharide Lyase AT1G04680 57.8 3.6e-130 461.8
Csa02g01684 . 70 426 Polysaccharide Lyase AT1G04680 58.5 9.3e-126 447.2
Csa01g00790 . 78 439 Polysaccharide Lyase AT1G04680 56.7 1.1e-121 433.7
Csa06g02231 . 12 393 Polysaccharide Lyase AT1G04680 55.8 2.1e-117 419.5
Csa03g03864 CCT,ECH 66 441 Polysaccharide Lyase AT1G04680 53.1 4.3e-115 411.8
Csa05g02422 CCT,ECH 47 432 Polysaccharide Lyase AT1G04680 53.1 2.1e-114 409.5
Csa01g01041 CCT 35 381 Polysaccharide Lyase AT1G04680 53.4 6.9e-105 377.9
Csa06g03495 CCT 26 340 Polysaccharide Lyase AT1G04680 57.4 1.5e-104 376.7
Csa03g03864 CCT,ECH 10 442 Polysaccharide Lyase AT2G02720 57.3 2.6e-150 528.9
Csa01g00790 . 24 440 Polysaccharide Lyase AT2G02720 57.6 2.2e-149 525.8
Csa05g02422 CCT,ECH 8 433 Polysaccharide Lyase AT2G02720 57.1 7.2e-145 510.8
Csa06g02231 . 25 436 Polysaccharide Lyase AT2G02720 58.2 5.7e-142 501.1
Csa02g01789 . 67 416 Polysaccharide Lyase AT2G02720 56.2 5.9e-123 438.0
Csa02g00989 . 101 450 Polysaccharide Lyase AT2G02720 55.1 3.1e-119 425.6
Csa01g00913 . 65 414 Polysaccharide Lyase AT2G02720 55.3 1.5e-118 423.3
Csa05g01868 . 70 419 Polysaccharide Lyase AT2G02720 55.3 2.0e-118 422.9
Csa03g01128 . 99 448 Polysaccharide Lyase AT2G02720 53.7 4.6e-115 411.8
Csa03g02663 . 85 434 Polysaccharide Lyase AT2G02720 54.2 6.0e-115 411.4
Csa02g01684 . 72 416 Polysaccharide Lyase AT2G02720 53.3 4.1e-108 388.7
Csa06g03495 CCT 31 381 Polysaccharide Lyase AT2G02720 51.5 1.0e-98 357.5
Csa03g03864 CCT,ECH 1 442 Polysaccharide Lyase AT3G01270 59.1 4.7e-163 571.2
Csa01g00790 . 12 440 Polysaccharide Lyase AT3G01270 56.1 6.4e-152 534.3
Csa05g02422 CCT,ECH 11 433 Polysaccharide Lyase AT3G01270 57.2 1.7e-149 526.2
Csa06g02231 . 9 436 Polysaccharide Lyase AT3G01270 56.3 2.3e-146 515.8
Csa02g00989 . 97 450 Polysaccharide Lyase AT3G01270 60.1 3.3e-124 442.2
Csa03g02663 . 81 434 Polysaccharide Lyase AT3G01270 59.6 2.1e-123 439.5
Csa02g01789 . 63 416 Polysaccharide Lyase AT3G01270 57.0 2.0e-121 433.0
Csa03g01128 . 95 448 Polysaccharide Lyase AT3G01270 59.0 4.4e-121 431.8
Csa05g01868 . 66 419 Polysaccharide Lyase AT3G01270 57.9 3.2e-119 425.6
Csa01g00913 . 61 414 Polysaccharide Lyase AT3G01270 57.6 1.1e-116 417.2
Csa06g02614 . 73 417 Polysaccharide Lyase AT3G01270 55.0 2.1e-115 412.9
Csa05g02772 . 66 413 Polysaccharide Lyase AT3G01270 56.0 5.8e-113 404.8
Csa02g01684 . 71 413 Polysaccharide Lyase AT3G01270 54.8 4.3e-108 388.7
Csa06g03495 CCT 33 381 Polysaccharide Lyase AT3G01270 51.4 5.8e-97 351.7
Csa04g01452 . 86 372 Polysaccharide Lyase AT3G55140 73.2 2.3e-131 465.3
Csa06g02614 . 38 453 Polysaccharide Lyase AT3G53190 81.7 5.8e-209 723.8
Csa02g01684 . 37 421 Polysaccharide Lyase AT3G53190 74.1 3.5e-174 608.2
Csa05g02772 . 34 445 Polysaccharide Lyase AT3G53190 67.0 1.7e-168 589.3
Csa02g01789 . 3 407 Polysaccharide Lyase AT3G53190 62.4 1.5e-153 539.7
Csa02g00989 . 71 441 Polysaccharide Lyase AT3G53190 65.9 1.1e-151 533.5
Csa03g01128 . 69 439 Polysaccharide Lyase AT3G53190 64.8 2.7e-150 528.9
Csa03g02663 . 55 425 Polysaccharide Lyase AT3G53190 64.8 2.3e-149 525.8
Csa01g00913 . 35 405 Polysaccharide Lyase AT3G53190 62.2 5.3e-146 514.6
Csa05g01868 . 40 410 Polysaccharide Lyase AT3G53190 61.6 4.5e-145 511.5
Csa01g00790 . 54 431 Polysaccharide Lyase AT3G53190 58.5 4.4e-132 468.4
Csa05g02422 CCT,ECH 45 424 Polysaccharide Lyase AT3G53190 56.1 1.9e-127 453.0
Csa06g02231 . 79 427 Polysaccharide Lyase AT3G53190 58.7 2.3e-125 446.0
Csa03g03864 CCT,ECH 50 433 Polysaccharide Lyase AT3G53190 53.1 3.9e-125 445.3
Csa06g03495 CCT 33 343 Polysaccharide Lyase AT3G53190 59.4 1.4e-109 393.7
Csa01g01041 CCT 35 373 Polysaccharide Lyase AT3G53190 55.6 1.4e-106 383.6
Csa01g01041 CCT 9 382 Polysaccharide Lyase AT1G30350 62.4 4.6e-134 474.6
Csa06g03495 CCT 2 381 Polysaccharide Lyase AT1G30350 61.1 1.6e-131 466.1
Csa02g01789 . 67 416 Polysaccharide Lyase AT1G30350 55.6 3.0e-109 392.1
Csa01g00913 . 65 414 Polysaccharide Lyase AT1G30350 55.0 8.2e-107 384.0
Csa02g00989 . 101 450 Polysaccharide Lyase AT1G30350 53.8 1.2e-105 380.2
Csa05g01868 . 70 419 Polysaccharide Lyase AT1G30350 53.8 2.6e-105 379.0
Csa03g02663 . 85 434 Polysaccharide Lyase AT1G30350 53.1 4.5e-105 378.3
Csa03g01128 . 99 448 Polysaccharide Lyase AT1G30350 52.9 2.9e-104 375.6
Csa02g01684 . 63 413 Polysaccharide Lyase AT1G30350 51.3 2.3e-101 365.9
Csa05g02772 . 73 413 Polysaccharide Lyase AT1G30350 52.2 4.4e-100 361.7
Csa06g02614 . 77 417 Polysaccharide Lyase AT1G30350 50.4 4.1e-98 355.1
Csa01g00519 . 66 318 Polysaccharide Lyase AT5G09280 71.4 4.0e-112 401.4
Csa02g01789 . 100 346 Polysaccharide Lyase AT5G09280 51.6 1.1e-66 250.4
Csa01g01041 CCT 68 304 Polysaccharide Lyase AT5G09280 54.2 2.6e-66 249.2
Csa02g00989 . 140 369 Polysaccharide Lyase AT5G09280 50.6 3.7e-65 245.4
Csa01g00913 . 104 343 Polysaccharide Lyase AT5G09280 50.6 6.3e-65 244.6
Csa06g03495 CCT 66 300 Polysaccharide Lyase AT5G09280 50.4 2.4e-64 242.7
Csa02g02193 . 13 631 Polysaccharide Lyase AT4G38030 55.3 9.1e-213 736.9
Csa03g04505 . 32 679 Polysaccharide Lyase AT4G38030 52.4 1.1e-207 719.9
Csa03g04506 . 1 630 Polysaccharide Lyase AT4G38030 54.1 3.1e-205 711.8
Csa03g04504 . 13 632 Polysaccharide Lyase AT4G38030 54.8 5.9e-204 707.6
Csa03g00697 . 65 561 Polysaccharide Lyase AT4G38030 51.2 5.4e-157 551.6
Csa03g04505 . 49 679 Polysaccharide Lyase AT1G09880 63.8 2.3e-256 881.7
Csa02g02193 . 6 631 Polysaccharide Lyase AT1G09880 62.3 8.4e-243 836.6
Csa03g04504 . 2 634 Polysaccharide Lyase AT1G09880 60.2 2.7e-233 805.1
Csa03g04506 . 2 630 Polysaccharide Lyase AT1G09880 59.2 4.6e-233 804.3
Csa06g03096 . 42 631 Polysaccharide Lyase AT1G09880 52.2 5.7e-191 664.5
Csa03g00697 . 64 561 Polysaccharide Lyase AT1G09880 56.9 4.4e-175 611.7
Csa02g02193 . 6 631 Polysaccharide Lyase AT1G09890 68.5 2.9e-269 924.5
Csa03g04506 . 6 630 Polysaccharide Lyase AT1G09890 69.0 1.9e-268 921.8
Csa03g04504 . 6 632 Polysaccharide Lyase AT1G09890 66.6 2.3e-250 861.7
Csa03g04505 . 49 679 Polysaccharide Lyase AT1G09890 63.2 1.6e-243 839.0
Csa06g03509 . 33 651 Polysaccharide Lyase AT1G09890 50.7 8.0e-195 677.2
Csa06g03096 . 41 631 Polysaccharide Lyase AT1G09890 51.7 1.3e-189 659.8
Csa03g00697 . 58 561 Polysaccharide Lyase AT1G09890 56.3 1.1e-175 613.6
Csa03g04506 . 1 632 Polysaccharide Lyase AT1G09910 71.0 1.4e-295 1011.9
Csa02g02193 . 1 632 Polysaccharide Lyase AT1G09910 65.9 4.6e-267 917.1
Csa03g04505 . 51 679 Polysaccharide Lyase AT1G09910 63.3 5.9e-254 873.6
Csa03g04504 . 1 634 Polysaccharide Lyase AT1G09910 62.9 2.7e-251 864.8
Csa06g03096 . 36 631 Polysaccharide Lyase AT1G09910 51.1 1.5e-193 672.9
Csa03g00697 . 64 561 Polysaccharide Lyase AT1G09910 55.8 9.0e-178 620.5
Csa03g04504 . 10 632 Polysaccharide Lyase AT4G37950 56.1 1.1e-210 729.9
Csa03g04506 . 9 630 Polysaccharide Lyase AT4G37950 56.1 5.2e-208 721.1
Csa02g02193 . 2 631 Polysaccharide Lyase AT4G37950 54.5 9.2e-205 710.3
Csa03g04505 . 55 679 Polysaccharide Lyase AT4G37950 54.0 1.5e-202 703.0
Csa06g03096 . 36 631 Polysaccharide Lyase AT4G37950 51.4 4.3e-186 648.3
Csa03g00697 . 56 561 Polysaccharide Lyase AT4G37950 58.6 3.2e-181 632.1
Csa03g04504 . 115 635 Polysaccharide Lyase AT4G24430 67.2 2.6e-223 771.5
Csa02g02193 . 116 638 Polysaccharide Lyase AT4G24430 64.0 2.9e-214 741.5
Csa03g04505 . 163 679 Polysaccharide Lyase AT4G24430 63.7 2.0e-210 728.8
Csa03g04506 . 117 631 Polysaccharide Lyase AT4G24430 64.6 6.3e-209 723.8
Csa06g03096 . 111 631 Polysaccharide Lyase AT4G24430 55.0 1.8e-171 599.4
Csa06g03509 . 134 651 Polysaccharide Lyase AT4G24430 50.8 4.0e-163 571.6
Csa03g00697 . 165 561 Polysaccharide Lyase AT4G24430 58.0 8.4e-145 510.8
Csa03g00697 . 56 476 Polysaccharide Lyase AT2G22620 60.4 1.2e-155 546.6
Csa03g04506 . 15 428 Polysaccharide Lyase AT2G22620 55.3 2.0e-137 486.1
Csa02g02193 . 1 423 Polysaccharide Lyase AT2G22620 54.0 2.1e-134 476.1
Csa03g04505 . 58 470 Polysaccharide Lyase AT2G22620 54.5 2.7e-134 475.7
Csa03g04504 . 15 422 Polysaccharide Lyase AT2G22620 56.8 6.6e-133 471.1
Csa06g03096 . 41 425 Polysaccharide Lyase AT2G22620 51.8 4.2e-127 451.8
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010097 0 2 1 2 0 1 2 1 1 1 1 1 1 1 1 2 1 2 2 1 1 1 1 1 0 1 1 1 1 1 33
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Csa01g00519 Csa_Chr01 FPKM 13.894737 14.3473 19.3188 21.427288 17.463949 15.578242 18.171864 12.38853 12.096885 14.992149